RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 PRKD2Q9BZL6 878 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 EPC1Q9H2F5 836 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 SCN3BQ9NY72 215 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 DDX20Q9UHI6 824 aaKnown RBP7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 FGF10O15520 208 aaPredicted RBP7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 MAFO75444 373 aaPredicted RBP7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 KATNA1O75449 491 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 AKAP3O75969 853 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 GSTM1P09488 218 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 TPH1P17752 444 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 ZNF135P52742 658 aaPredicted RBP7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 MPP3Q13368 585 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 GNA13Q14344 377 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 USP39Q53GS9 565 aaKnown RBP7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 GPR158Q5T848 1215 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 LRRC8DQ7L1W4 858 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 VN1R5Q7Z5H4 357 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 LUZP2Q86TE4 346 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 UNC93AQ86WB7 457 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 PPTC7Q8NI37 304 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 PAWRQ96IZ0 340 aaKnown RBP7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 OSBPL6Q9BZF3 934 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 USE1Q9NZ43 259 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 SH3BP4Q9P0V3 963 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 HES2Q9Y543 173 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 KIF1AQ12756 1690 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 FRMPD4Q14CM0 1322 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 TMEM114B3SHH9 223 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 ERN1O75460 977 aaKnown RBP7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 INHAP05111 366 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 CNTFP26441 200 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 NR2C2P49116 596 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 CLK2P49760 499 aaKnown RBP7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 CLK3P49761 638 aaKnown RBP7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 UBE3AQ05086 875 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 IYDQ6PHW0 289 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 METTL3Q86U44 580 aaKnown RBP7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 PRPF39Q86UA1 669 aaKnown RBP7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 P3H2Q8IVL5 708 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 DSELQ8IZU8 1212 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 KCNV2Q8TDN2 545 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 MKL1Q969V6 931 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 PPP1R10Q96QC0 940 aaKnown RBP7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 TMEM121Q9BTD3 319 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 TTPALQ9BTX7 342 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 ATP13A3Q9H7F0 1226 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 ACOT9Q9Y305 439 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 IQGAP1P46940 1657 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 SEPT4O43236 478 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 GUCY1B2O75343 617 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 EIF2S1P05198 315 aaKnown RBP7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 ABCB1P08183 1280 aaPredicted RBP7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 MMP3P08254 477 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 SLC2A4P14672 509 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 JAK1P23458 1154 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 MAPK8P45983 427 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 CD151P48509 253 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 NPY2RP49146 381 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 TMED1Q13445 227 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 ICE2Q659A1 982 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 MAP4K3Q8IVH8 894 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 RNF168Q8IYW5 571 aaPredicted RBP7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 MAB21L3Q8N8X9 362 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 POMGNT2Q8NAT1 580 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 ABTB1Q969K4 478 aaPredicted RBP7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 WDR24Q96S15 920 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 CARD9Q9H257 536 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 TRIT1Q9H3H1 467 aaKnown RBP7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 KBTBD4Q9NVX7 518 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 DNPEPQ9ULA0 475 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 PCDHAC2Q9Y5I4 1007 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 KIF20BQ96Q89 1820 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 TBC1D3DA0A087WVF3 549 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 TBC1D3IA0A087WXS9 549 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 TBC1D3EA0A087X179 549 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 TBC1D3KA0A087X1G2 549 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 TBC1D3FA6NER0 549 aaPredicted RBP7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 OR6C75A6NL08 312 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 TBC1D3LB9A6J9 549 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 TRDMT1O14717 391 aaKnown RBP7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 TOMM70O94826 608 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 CNPP09543 421 aaKnown RBP7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 TBC1D3HP0C7X1 549 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 NPR3P17342 541 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 NME5P56597 212 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 PFKPQ01813 784 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 STX5Q13190 355 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 TBC1D3GQ6DHY5 549 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 TBC1D3CQ6IPX1 549 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 DET1Q7L5Y6 550 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 TTC7BQ86TV6 843 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 LRRC6Q86X45 466 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 TBC1D3Q8IZP1 549 aaPredicted RBP7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 RIN3Q8TB24 985 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 HTR3CQ8WXA8 447 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 ELMO3Q96BJ8 720 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 PURBQ96QR8 312 aaKnown RBP7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 TAS2R13Q9NYV9 303 aa7.07□□□□□ -1.28
GAPVD1-202ENST00000297933 ATP6V1HQ9UI12 483 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms