RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 PRPSAP2O60256 369 aa16.04■□□□□ 0.16
UBAP1-201ENST00000297661 TOP3BO95985 862 aaKnown RBP16.04■□□□□ 0.16
UBAP1-201ENST00000297661 TXNP10599 105 aaKnown RBP16.04■□□□□ 0.16
UBAP1-201ENST00000297661 ZNF143P52747 638 aaPredicted RBP16.04■□□□□ 0.16
UBAP1-201ENST00000297661 ATXN1P54253 815 aaKnown RBP16.04■□□□□ 0.16
UBAP1-201ENST00000297661 NOMO1Q15155 1222 aa16.04■□□□□ 0.16
UBAP1-201ENST00000297661 SLC10A6Q3KNW5 377 aa16.04■□□□□ 0.16
UBAP1-201ENST00000297661 SCUBE3Q8IX30 993 aa16.04■□□□□ 0.16
UBAP1-201ENST00000297661 CCDC106Q9BWC9 280 aa16.04■□□□□ 0.16
UBAP1-201ENST00000297661 WWP1Q9H0M0 922 aa16.04■□□□□ 0.16
UBAP1-201ENST00000297661 C1orf21Q9H246 121 aa16.04■□□□□ 0.16
UBAP1-201ENST00000297661 RSAD1Q9HA92 442 aa16.04■□□□□ 0.16
UBAP1-201ENST00000297661 ASNSD1Q9NWL6 643 aa16.04■□□□□ 0.16
UBAP1-201ENST00000297661 SOX13Q9UN79 622 aa16.04■□□□□ 0.16
UBAP1-201ENST00000297661 TEX264Q9Y6I9 313 aa16.04■□□□□ 0.16
UBAP1-201ENST00000297661 TRIM49D1C9J1S8 452 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 STRNO43815 780 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 SUPT3HO75486 399 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 TGFB3P10600 412 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 CPOXP36551 454 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 SLC25A3Q00325 362 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 ZFP28Q8NHY6 868 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 CXorf38Q8TB03 319 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 PIH1D1Q9NWS0 290 aaKnown RBP16.03■□□□□ 0.16
UBAP1-201ENST00000297661 MARCOQ9UEW3 520 aaPredicted RBP16.03■□□□□ 0.16
UBAP1-201ENST00000297661 AKT3Q9Y243 479 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 GINS2Q9Y248 185 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 SH3GLB1Q9Y371 365 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 ANK1P16157 1881 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 TMEM221A6NGB7 291 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 UNCXA6NJT0 531 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 C2CD4BA6NLJ0 364 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 I3L4J1 428 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 CYB561D2O14569 222 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 KITP10721 976 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 PCSK6P29122 969 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 YWHAZP63104 245 aaKnown RBP16.03■□□□□ 0.16
UBAP1-201ENST00000297661 MPP3Q13368 585 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 UBAP2LQ14157 1087 aaKnown RBP16.03■□□□□ 0.16
UBAP1-201ENST00000297661 KCNJ11Q14654 390 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 AMHR2Q16671 573 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 GRAMD1BQ3KR37 738 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 TMC7Q7Z402 723 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 PLD5Q8N7P1 536 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 ICA1LQ8NDH6 482 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 DIS3LQ8TF46 1054 aaKnown RBP16.03■□□□□ 0.16
UBAP1-201ENST00000297661 SLC44A1Q8WWI5 657 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 ACAP3Q96P50 834 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 GCNAQ96QF7 691 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 GRIP2Q9C0E4 1043 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 RBM38Q9H0Z9 239 aaKnown RBP16.03■□□□□ 0.16
UBAP1-201ENST00000297661 IL4RP24394 825 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 EPHB1P54762 984 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 AQP5P55064 265 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 IRX4P78413 519 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 CCNIQ14094 377 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 TLR1Q15399 786 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 GOLGA7BQ2TAP0 167 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 CCDC14Q49A88 953 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 HIPK4Q8NE63 616 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 SMYD2Q9NRG4 433 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 LZTS1Q9Y250 596 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 TNFSF13BQ9Y275 285 aa16.03■□□□□ 0.16
UBAP1-201ENST00000297661 IQANK1A0A1B0GTG1 560 aa16.02■□□□□ 0.16
UBAP1-201ENST00000297661 PPEF2O14830 753 aa16.02■□□□□ 0.16
UBAP1-201ENST00000297661 KLF11O14901 512 aa16.02■□□□□ 0.16
UBAP1-201ENST00000297661 CNMDO75829 334 aa16.02■□□□□ 0.16
UBAP1-201ENST00000297661 SORBS2O94875 1100 aaKnown RBP16.02■□□□□ 0.16
UBAP1-201ENST00000297661 C6orf222P0C671 652 aaPredicted RBP16.02■□□□□ 0.16
UBAP1-201ENST00000297661 INSRRP14616 1297 aa16.02■□□□□ 0.16
UBAP1-201ENST00000297661 GRIA1P42261 906 aa16.02■□□□□ 0.16
UBAP1-201ENST00000297661 BST1Q10588 318 aa16.02■□□□□ 0.16
UBAP1-201ENST00000297661 PMF1Q6P1K2 205 aa16.02■□□□□ 0.16
UBAP1-201ENST00000297661 ACOT1Q86TX2 421 aa16.02■□□□□ 0.16
UBAP1-201ENST00000297661 PQLC3Q8N755 202 aa16.02■□□□□ 0.16
UBAP1-201ENST00000297661 USP6NLQ92738 828 aa16.02■□□□□ 0.16
UBAP1-201ENST00000297661 CCDC124Q96CT7 223 aaKnown RBP16.02■□□□□ 0.16
UBAP1-201ENST00000297661 RILPQ96NA2 401 aa16.02■□□□□ 0.16
UBAP1-201ENST00000297661 RNF157Q96PX1 679 aa16.02■□□□□ 0.16
UBAP1-201ENST00000297661 BTBD9Q96Q07 612 aa16.02■□□□□ 0.16
UBAP1-201ENST00000297661 PHF12Q96QT6 1004 aa16.02■□□□□ 0.16
UBAP1-201ENST00000297661 CNPY3Q9BT09 278 aa16.02■□□□□ 0.16
UBAP1-201ENST00000297661 PDZD7Q9H5P4 517 aa16.02■□□□□ 0.16
UBAP1-201ENST00000297661 ZC3H7BQ9UGR2 993 aaKnown RBP16.02■□□□□ 0.16
UBAP1-201ENST00000297661 MAD1L1Q9Y6D9 718 aa16.02■□□□□ 0.16
UBAP1-201ENST00000297661 PFKMP08237 780 aa16.02■□□□□ 0.15
UBAP1-201ENST00000297661 ZNF286BP0CG31 522 aa16.02■□□□□ 0.15
UBAP1-201ENST00000297661 ATP6V1B1P15313 513 aa16.02■□□□□ 0.15
UBAP1-201ENST00000297661 ARF4P18085 180 aaPredicted RBP16.02■□□□□ 0.15
UBAP1-201ENST00000297661 SERPINB6P35237 376 aa16.02■□□□□ 0.15
UBAP1-201ENST00000297661 SERPINB8P50452 374 aa16.02■□□□□ 0.15
UBAP1-201ENST00000297661 RPL26P61254 145 aaKnown RBP16.02■□□□□ 0.15
UBAP1-201ENST00000297661 SREBF2Q12772 1141 aa16.02■□□□□ 0.15
UBAP1-201ENST00000297661 MYLK3Q32MK0 819 aa16.02■□□□□ 0.15
UBAP1-201ENST00000297661 HSP90AA5PQ58FG0 334 aa16.02■□□□□ 0.15
UBAP1-201ENST00000297661 TRMT10BQ6PF06 316 aaKnown RBP16.02■□□□□ 0.15
UBAP1-201ENST00000297661 TRIM67Q6ZTA4 783 aa16.02■□□□□ 0.15
UBAP1-201ENST00000297661 LRRC43Q8N309 656 aa16.02■□□□□ 0.15
UBAP1-201ENST00000297661 MPP5Q8N3R9 675 aa16.02■□□□□ 0.15
UBAP1-201ENST00000297661 PCDH19Q8TAB3 1148 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms