RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 ACSL5Q9ULC5 683 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 AFF2P51816 1311 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 ADAM17P78536 824 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 AMPD2Q01433 879 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 SPOCK1Q08629 439 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 SLC39A6Q13433 755 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 METTL21CQ5VZV1 264 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 CENPLQ8N0S6 344 aaPredicted RBP4.94□□□□□ -1.62
CSMD3-201ENST00000297405 OR4C6Q8NH72 309 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 REEP1Q9H902 201 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 TRNAU1APQ9NX07 287 aaKnown RBP4.94□□□□□ -1.62
CSMD3-201ENST00000297405 COQ6Q9Y2Z9 468 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 FARP1Q9Y4F1 1045 aaPredicted RBP4.94□□□□□ -1.62
CSMD3-201ENST00000297405 KIF28PB7ZC32 967 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 C2CD2LO14523 706 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 PRPF3O43395 683 aaKnown RBP4.94□□□□□ -1.62
CSMD3-201ENST00000297405 SSX5O60225 188 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 PRKAR2AP13861 404 aaKnown RBP4.94□□□□□ -1.62
CSMD3-201ENST00000297405 ATP12AP54707 1039 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 ZNF45Q02386 682 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 NAPEPLDQ6IQ20 393 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 PKN3Q6P5Z2 889 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 ATG14Q6ZNE5 492 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 FAM20AQ96MK3 541 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 REEP2Q9BRK0 252 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 MTG1Q9BT17 334 aaPredicted RBP4.94□□□□□ -1.62
CSMD3-201ENST00000297405 HERC2P3Q9BVR0 1158 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 AS3MTQ9HBK9 375 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 VPS54Q9P1Q0 977 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 RBM47A0AV96 593 aaKnown RBP4.94□□□□□ -1.62
CSMD3-201ENST00000297405 KITP10721 976 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 CRABP2P29373 138 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 PDIA5Q14554 519 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 LRRC69Q6ZNQ3 347 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 TMEM26Q6ZUK4 368 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 METTL23Q86XA0 190 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 TPCN2Q8NHX9 752 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 RIN2Q8WYP3 895 aaPredicted RBP4.94□□□□□ -1.62
CSMD3-201ENST00000297405 TOP1MTQ969P6 601 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 PIGSQ96S52 555 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 IL20Q9NYY1 176 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 ZC3H13Q5T200 1668 aaKnown RBP4.94□□□□□ -1.62
CSMD3-201ENST00000297405 SETBP1Q9Y6X0 1596 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 FAM25EA8MYX2 175 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 B8ZZF3 427 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 PDXKO00764 312 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 TRIM3O75382 744 aaPredicted RBP4.94□□□□□ -1.62
CSMD3-201ENST00000297405 SOX30O94993 753 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 ALOX15P16050 662 aaPredicted RBP4.94□□□□□ -1.62
CSMD3-201ENST00000297405 KRT33BQ14525 404 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 CMPK2Q5EBM0 449 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 LCN1P1Q5VSP4 162 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 SLC25A25Q6KCM7 469 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 TERB2Q8NHR7 220 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 HES6Q96HZ4 224 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 PPP3R2Q96LZ3 170 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 GRIP2Q9C0E4 1043 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 POLR1BQ9H9Y6 1135 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 ZNF334Q9HCZ1 680 aaPredicted RBP4.94□□□□□ -1.62
CSMD3-201ENST00000297405 TOPORSQ9NS56 1045 aaPredicted RBP4.94□□□□□ -1.62
CSMD3-201ENST00000297405 SAGE1Q9NXZ1 904 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 GRIN2AQ12879 1464 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 WDR7Q9Y4E6 1490 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 PTCD1O75127 700 aaKnown RBP4.94□□□□□ -1.62
CSMD3-201ENST00000297405 GATBO75879 557 aaKnown RBP4.94□□□□□ -1.62
CSMD3-201ENST00000297405 ANXA9O76027 345 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 H6PDO95479 791 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 RPS17P08708 135 aaKnown RBP4.94□□□□□ -1.62
CSMD3-201ENST00000297405 ALDH5A1P51649 535 aaPredicted RBP4.94□□□□□ -1.62
CSMD3-201ENST00000297405 ELF3P78545 371 aaPredicted RBP4.94□□□□□ -1.62
CSMD3-201ENST00000297405 ATP6AP1LQ52LC2 224 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 THEMIS2Q5TEJ8 643 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 BORAQ6PGQ7 559 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 ZNF574Q6ZN55 896 aaPredicted RBP4.94□□□□□ -1.62
CSMD3-201ENST00000297405 EXD1Q8NHP7 514 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 SNRKQ9NRH2 765 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 EMILIN3Q9NT22 766 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 AHSPQ9NZD4 102 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 ZNF180Q9UJW8 692 aa4.94□□□□□ -1.62
CSMD3-201ENST00000297405 IQGAP1P46940 1657 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 TULP3O75386 442 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 SERPINE1P05121 402 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 DLATP10515 647 aaKnown RBP4.93□□□□□ -1.62
CSMD3-201ENST00000297405 HARS2P49590 506 aaKnown RBP4.93□□□□□ -1.62
CSMD3-201ENST00000297405 TMBIM6P55061 237 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 KCNH2Q12809 1159 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 SYT16Q17RD7 645 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 ADAT2Q7Z6V5 191 aaKnown RBP4.93□□□□□ -1.62
CSMD3-201ENST00000297405 PROSER1Q86XN7 944 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 SLITRK4Q8IW52 837 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 C16orf71Q8IYS4 520 aaPredicted RBP4.93□□□□□ -1.62
CSMD3-201ENST00000297405 ATPAF2Q8N5M1 289 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 ZNF283Q8N7M2 679 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 MARCH10Q8NA82 808 aaPredicted RBP4.93□□□□□ -1.62
CSMD3-201ENST00000297405 RDH11Q8TC12 318 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 PYDC1Q8WXC3 89 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 FAM89AQ96GI7 184 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 CLCC1Q96S66 551 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 HIPK3Q9H422 1215 aa4.93□□□□□ -1.62
CSMD3-201ENST00000297405 TRPV5Q9NQA5 729 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms