RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 CSH1P0DML2 217 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 CSH2P0DML3 217 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 CPB1P15086 417 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 NCF2P19878 526 aaPredicted RBP9.57□□□□□ -0.88
PRDM9-201ENST00000296682 GCAP28676 217 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 NOS2P35228 1153 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 GABRB2P47870 512 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 GJA9P57773 515 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 PDZD4Q76G19 769 aaPredicted RBP9.57□□□□□ -0.88
PRDM9-201ENST00000296682 SLC26A9Q7LBE3 791 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 TNS4Q8IZW8 715 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 THEM5Q8N1Q8 247 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 PTPRN2Q92932 1015 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 APBA2Q99767 749 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 CAB39LQ9H9S4 337 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 ZNF358Q9NW07 568 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 SLC24A2Q9UI40 661 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 TSR3Q9UJK0 312 aaKnown RBP9.57□□□□□ -0.88
PRDM9-201ENST00000296682 LOC100653049A0A140TA62 436 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 PPP1R12AO14974 1030 aaPredicted RBP9.57□□□□□ -0.88
PRDM9-201ENST00000296682 GPR182O15218 404 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 DNAJC6O75061 913 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 AOC2O75106 756 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 KRT34O76011 436 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 ABHD2P08910 425 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 MYL2P10916 166 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 ZFXP17010 805 aaPredicted RBP9.57□□□□□ -0.88
PRDM9-201ENST00000296682 TGM2P21980 687 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 PCSK1P29120 753 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 SERPINB3P29508 390 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 GRK4P32298 578 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 FCGRTP55899 365 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 PDK1Q15118 436 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 SLC25A52Q3SY17 297 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 MGAT5BQ3V5L5 792 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 CERCAMQ5T4B2 595 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 KIAA0319Q5VV43 1072 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 CDHR3Q6ZTQ4 885 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 OTOP3Q7RTS5 596 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 RYBPQ8N488 228 aaPredicted RBP9.57□□□□□ -0.88
PRDM9-201ENST00000296682 ATAD1Q8NBU5 361 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 SPATA22Q8NHS9 363 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 ATP2A3Q93084 1043 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 C20orf96Q9NUD7 363 aaPredicted RBP9.57□□□□□ -0.88
PRDM9-201ENST00000296682 SLC38A7Q9NVC3 462 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 FARP1Q9Y4F1 1045 aaPredicted RBP9.57□□□□□ -0.88
PRDM9-201ENST00000296682 ARHGAP42A6NI28 874 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 IGHA2P01877 340 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 APOEP02649 317 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 CHRNA1P02708 482 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 ENO1P06733 434 aaKnown RBP9.56□□□□□ -0.88
PRDM9-201ENST00000296682 EZRP15311 586 aaKnown RBP9.56□□□□□ -0.88
PRDM9-201ENST00000296682 CDC25CP30307 473 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 ADRA1BP35368 520 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 SERPINB4P48594 390 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 MAXP61244 160 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 TTC39BQ5VTQ0 682 aaPredicted RBP9.56□□□□□ -0.88
PRDM9-201ENST00000296682 PIGWQ7Z7B1 504 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 HSFY1Q96LI6 401 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 SMOQ99835 787 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 SPON2Q9BUD6 331 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 FRMD8P1Q9BZ68 369 aaPredicted RBP9.56□□□□□ -0.88
PRDM9-201ENST00000296682 CNTN3Q9P232 1028 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 ACTL7BQ9Y614 415 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 TRIP12Q14669 1992 aaPredicted RBP9.56□□□□□ -0.88
PRDM9-201ENST00000296682 MKI67P46013 3256 aaKnown RBP9.56□□□□□ -0.88
PRDM9-201ENST00000296682 SDR42E2A6NKP2 422 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 XPO1O14980 1071 aaKnown RBP9.56□□□□□ -0.88
PRDM9-201ENST00000296682 ZBTB24O43167 697 aaPredicted RBP9.56□□□□□ -0.88
PRDM9-201ENST00000296682 ASMTLO95671 621 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 TBX18O95935 607 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 VAV1P15498 845 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 EFEMP1Q12805 493 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 MTFR1Q15390 333 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 NXNQ6DKJ4 435 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 GLB1LQ6UWU2 654 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 AGMOQ6ZNB7 445 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 BZW1Q7L1Q6 419 aaKnown RBP9.56□□□□□ -0.88
PRDM9-201ENST00000296682 ZNF467Q7Z7K2 595 aaPredicted RBP9.56□□□□□ -0.88
PRDM9-201ENST00000296682 CAND1Q86VP6 1230 aaKnown RBP9.56□□□□□ -0.88
PRDM9-201ENST00000296682 TDRPQ86YL5 185 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 GIMAP7Q8NHV1 300 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 DTX3LQ8TDB6 740 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 PPP4R1Q8TF05 950 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 EXT2Q93063 718 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 MFSD3Q96ES6 412 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 GLT1D1Q96MS3 346 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 EPAS1Q99814 870 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 WDR83Q9BRX9 315 aaKnown RBP9.56□□□□□ -0.88
PRDM9-201ENST00000296682 ZNF670Q9BS34 389 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 SYBUQ9NX95 663 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 SENP1Q9P0U3 644 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 SLC39A10Q9ULF5 831 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 VANGL2Q9ULK5 521 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 USH1CQ9Y6N9 552 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 TTC3P53804 2025 aa9.56□□□□□ -0.88
PRDM9-201ENST00000296682 GOLGA4Q13439 2230 aaKnown RBP9.56□□□□□ -0.88
PRDM9-201ENST00000296682 NDC80O14777 642 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 DIAPH2O60879 1101 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 LYPLA1O75608 230 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms