RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 DKK4Q9UBT3 224 aa16.64■□□□□ 0.25
TMEM41A-201ENST00000296254 ANKRD6Q9Y2G4 727 aa16.64■□□□□ 0.25
TMEM41A-201ENST00000296254 ATP5BP06576 529 aaKnown RBP16.63■□□□□ 0.25
TMEM41A-201ENST00000296254 CD27P26842 260 aa16.63■□□□□ 0.25
TMEM41A-201ENST00000296254 CD70P32970 193 aa16.63■□□□□ 0.25
TMEM41A-201ENST00000296254 GRK6P43250 576 aa16.63■□□□□ 0.25
TMEM41A-201ENST00000296254 CCT8P50990 548 aa16.63■□□□□ 0.25
TMEM41A-201ENST00000296254 YWHAEP62258 255 aaKnown RBP16.63■□□□□ 0.25
TMEM41A-201ENST00000296254 SUZ12Q15022 739 aaKnown RBP16.63■□□□□ 0.25
TMEM41A-201ENST00000296254 COL28A1Q2UY09 1125 aa16.63■□□□□ 0.25
TMEM41A-201ENST00000296254 FAM133BQ5BKY9 247 aaKnown RBP16.63■□□□□ 0.25
TMEM41A-201ENST00000296254 ZNF776Q68DI1 518 aaPredicted RBP16.63■□□□□ 0.25
TMEM41A-201ENST00000296254 PDZD3Q86UT5 571 aa16.63■□□□□ 0.25
TMEM41A-201ENST00000296254 UBA3Q8TBC4 463 aa16.63■□□□□ 0.25
TMEM41A-201ENST00000296254 GOLGA1Q92805 767 aa16.63■□□□□ 0.25
TMEM41A-201ENST00000296254 ORAI3Q9BRQ5 295 aa16.63■□□□□ 0.25
TMEM41A-201ENST00000296254 IRX2Q9BZI1 471 aaPredicted RBP16.63■□□□□ 0.25
TMEM41A-201ENST00000296254 SGK2Q9HBY8 427 aa16.63■□□□□ 0.25
TMEM41A-201ENST00000296254 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.63■□□□□ 0.25
TMEM41A-201ENST00000296254 RAXQ9Y2V3 346 aa16.63■□□□□ 0.25
TMEM41A-201ENST00000296254 ZDHHC9Q9Y397 364 aa16.63■□□□□ 0.25
TMEM41A-201ENST00000296254 IRAK2O43187 625 aa16.62■□□□□ 0.25
TMEM41A-201ENST00000296254 PCDHGA12O60330 932 aa16.62■□□□□ 0.25
TMEM41A-201ENST00000296254 FSBPO95073 299 aa16.62■□□□□ 0.25
TMEM41A-201ENST00000296254 ZNF202O95125 648 aa16.62■□□□□ 0.25
TMEM41A-201ENST00000296254 VDRP11473 427 aa16.62■□□□□ 0.25
TMEM41A-201ENST00000296254 PIK3R6Q5UE93 754 aa16.62■□□□□ 0.25
TMEM41A-201ENST00000296254 NUGGCQ68CJ6 796 aa16.62■□□□□ 0.25
TMEM41A-201ENST00000296254 RFWD3Q6PCD5 774 aa16.62■□□□□ 0.25
TMEM41A-201ENST00000296254 ZNF557Q8N988 423 aaPredicted RBP16.62■□□□□ 0.25
TMEM41A-201ENST00000296254 MYO19Q96H55 970 aa16.62■□□□□ 0.25
TMEM41A-201ENST00000296254 LMLNQ96KR4 655 aa16.62■□□□□ 0.25
TMEM41A-201ENST00000296254 PRICKLE1Q96MT3 831 aaPredicted RBP16.62■□□□□ 0.25
TMEM41A-201ENST00000296254 TMEM131Q92545 1883 aa16.62■□□□□ 0.25
TMEM41A-201ENST00000296254 PAPSS1O43252 624 aaPredicted RBP16.61■□□□□ 0.25
TMEM41A-201ENST00000296254 TNFSF14O43557 240 aa16.61■□□□□ 0.25
TMEM41A-201ENST00000296254 TBL1XO60907 577 aa16.61■□□□□ 0.25
TMEM41A-201ENST00000296254 IGHV4-34P06331 123 aa16.61■□□□□ 0.25
TMEM41A-201ENST00000296254 LCP1P13796 627 aa16.61■□□□□ 0.25
TMEM41A-201ENST00000296254 POLR2EP19388 210 aaKnown RBP16.61■□□□□ 0.25
TMEM41A-201ENST00000296254 TBXAS1P24557 533 aaPredicted RBP16.61■□□□□ 0.25
TMEM41A-201ENST00000296254 SLC6A4P31645 630 aa16.61■□□□□ 0.25
TMEM41A-201ENST00000296254 PRCPP42785 496 aa16.61■□□□□ 0.25
TMEM41A-201ENST00000296254 CTSKP43235 329 aa16.61■□□□□ 0.25
TMEM41A-201ENST00000296254 SLC11A2P49281 568 aa16.61■□□□□ 0.25
TMEM41A-201ENST00000296254 KCNT1Q5JUK3 1230 aa16.61■□□□□ 0.25
TMEM41A-201ENST00000296254 LCLAT1Q6UWP7 414 aa16.61■□□□□ 0.25
TMEM41A-201ENST00000296254 USP30Q70CQ3 517 aa16.61■□□□□ 0.25
TMEM41A-201ENST00000296254 MFN1Q8IWA4 741 aa16.61■□□□□ 0.25
TMEM41A-201ENST00000296254 GALNT15Q8N3T1 639 aa16.61■□□□□ 0.25
TMEM41A-201ENST00000296254 IRGQQ8WZA9 623 aa16.61■□□□□ 0.25
TMEM41A-201ENST00000296254 SLC35C1Q96A29 364 aa16.61■□□□□ 0.25
TMEM41A-201ENST00000296254 SCAND2PQ9GZW5 306 aaPredicted RBP16.61■□□□□ 0.25
TMEM41A-201ENST00000296254 RSPH9Q9H1X1 276 aaPredicted RBP16.61■□□□□ 0.25
TMEM41A-201ENST00000296254 SCUBE2Q9NQ36 999 aa16.61■□□□□ 0.25
TMEM41A-201ENST00000296254 KIAA1257Q9ULG3 409 aa16.61■□□□□ 0.25
TMEM41A-201ENST00000296254 SCML1Q9UN30 329 aa16.61■□□□□ 0.25
TMEM41A-201ENST00000296254 GOLGA8CPA6NN73 597 aa16.6■□□□□ 0.25
TMEM41A-201ENST00000296254 H0Y8X5 98 aa16.6■□□□□ 0.25
TMEM41A-201ENST00000296254 GABBR2O75899 941 aa16.6■□□□□ 0.25
TMEM41A-201ENST00000296254 PAEPP09466 180 aa16.6■□□□□ 0.25
TMEM41A-201ENST00000296254 RGS7P49802 495 aa16.6■□□□□ 0.25
TMEM41A-201ENST00000296254 PMS1P54277 932 aaKnown RBP16.6■□□□□ 0.25
TMEM41A-201ENST00000296254 FKBP3Q00688 224 aaKnown RBP16.6■□□□□ 0.25
TMEM41A-201ENST00000296254 PNOCQ13519 176 aa16.6■□□□□ 0.25
TMEM41A-201ENST00000296254 SMAD1Q15797 465 aaKnown RBP16.6■□□□□ 0.25
TMEM41A-201ENST00000296254 INAVAQ3KP66 663 aa16.6■□□□□ 0.25
TMEM41A-201ENST00000296254 COBLL1Q53SF7 1204 aa16.6■□□□□ 0.25
TMEM41A-201ENST00000296254 KIAA0895LQ68EN5 471 aa16.6■□□□□ 0.25
TMEM41A-201ENST00000296254 PMF1Q6P1K2 205 aa16.6■□□□□ 0.25
TMEM41A-201ENST00000296254 ADAT2Q7Z6V5 191 aaKnown RBP16.6■□□□□ 0.25
TMEM41A-201ENST00000296254 MARCH9Q86YJ5 346 aa16.6■□□□□ 0.25
TMEM41A-201ENST00000296254 UNC45BQ8IWX7 931 aa16.6■□□□□ 0.25
TMEM41A-201ENST00000296254 HJURPQ8NCD3 748 aaPredicted RBP16.6■□□□□ 0.25
TMEM41A-201ENST00000296254 SLC35F5Q8WV83 523 aa16.6■□□□□ 0.25
TMEM41A-201ENST00000296254 TFAP2BQ92481 460 aa16.6■□□□□ 0.25
TMEM41A-201ENST00000296254 CCDC34Q96HJ3 373 aa16.6■□□□□ 0.25
TMEM41A-201ENST00000296254 TSG101Q99816 390 aa16.6■□□□□ 0.25
TMEM41A-201ENST00000296254 PABPC3Q9H361 631 aaKnown RBP16.6■□□□□ 0.25
TMEM41A-201ENST00000296254 MTG2Q9H4K7 406 aa16.6■□□□□ 0.25
TMEM41A-201ENST00000296254 RMND1Q9NWS8 449 aa16.6■□□□□ 0.25
TMEM41A-201ENST00000296254 SUN2Q9UH99 717 aa16.6■□□□□ 0.25
TMEM41A-201ENST00000296254 GOLGA6L7A0A1B0GV03 622 aa16.59■□□□□ 0.25
TMEM41A-201ENST00000296254 KCNK3O14649 394 aa16.59■□□□□ 0.25
TMEM41A-201ENST00000296254 ACSL4O60488 711 aa16.59■□□□□ 0.25
TMEM41A-201ENST00000296254 LTFP02788 710 aa16.59■□□□□ 0.25
TMEM41A-201ENST00000296254 ASLP04424 464 aa16.59■□□□□ 0.25
TMEM41A-201ENST00000296254 TBX4P57082 545 aa16.59■□□□□ 0.25
TMEM41A-201ENST00000296254 RACK1P63244 317 aaKnown RBP16.59■□□□□ 0.25
TMEM41A-201ENST00000296254 IL9RQ01113 521 aa16.59■□□□□ 0.25
TMEM41A-201ENST00000296254 LRMPQ12912 555 aa16.59■□□□□ 0.25
TMEM41A-201ENST00000296254 CAMK2BQ13554 666 aa16.59■□□□□ 0.25
TMEM41A-201ENST00000296254 HNRNPA1L2Q32P51 320 aaKnown RBP16.59■□□□□ 0.25
TMEM41A-201ENST00000296254 SOWAHCQ53LP3 525 aaPredicted RBP16.59■□□□□ 0.25
TMEM41A-201ENST00000296254 NADSYN1Q6IA69 706 aa16.59■□□□□ 0.25
TMEM41A-201ENST00000296254 TMEM270Q6UE05 265 aa16.59■□□□□ 0.25
TMEM41A-201ENST00000296254 ENGASEQ8NFI3 743 aa16.59■□□□□ 0.25
TMEM41A-201ENST00000296254 FIBINQ8TAL6 211 aa16.59■□□□□ 0.25
TMEM41A-201ENST00000296254 CLEC4CQ8WTT0 213 aa16.59■□□□□ 0.25
TMEM41A-201ENST00000296254 AZIN2Q96A70 460 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms