RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 TAX1BP1Q86VP1 789 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 HTR3CQ8WXA8 447 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 TTPALQ9BTX7 342 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 OSBPL2Q9H1P3 480 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 ACSS3Q9H6R3 686 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 ETNK1Q9HBU6 452 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.43□□□□□ -0.9
PDPN-201ENST00000294489 HSFX1Q9UBD0 423 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 MTRRQ9UBK8 725 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 RABGEF1Q9UJ41 708 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 CHMP2BQ9UQN3 213 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 RAD54BQ9Y620 910 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 MTMR11A4FU01 709 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 CARNS1A5YM72 827 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 PPP1R12AO14974 1030 aaPredicted RBP9.43□□□□□ -0.9
PDPN-201ENST00000294489 DCLK1O15075 740 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 AMHP03971 560 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 GRIK1P39086 918 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 ELK3P41970 407 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 IFNAR2P48551 515 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 MTM1Q13496 603 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 SYCP2LQ5T4T6 812 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 RFX8Q6ZV50 586 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 TAC4Q86UU9 113 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 NUP93Q8N1F7 819 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 ANKRD42Q8N9B4 389 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 ADAM32Q8TC27 787 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 SPPL2BQ8TCT7 592 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 MGARPQ8TDB4 240 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 DQX1Q8TE96 717 aaKnown RBP9.43□□□□□ -0.9
PDPN-201ENST00000294489 FBF1Q8TES7 1133 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 PAWRQ96IZ0 340 aaKnown RBP9.43□□□□□ -0.9
PDPN-201ENST00000294489 CYTH2Q99418 400 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 NSRP1Q9H0G5 558 aaKnown RBP9.43□□□□□ -0.9
PDPN-201ENST00000294489 WDCPQ9H6R7 721 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 NEU3Q9UQ49 428 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 HAPLN1P10915 354 aaPredicted RBP9.42□□□□□ -0.9
PDPN-201ENST00000294489 CREB1P16220 341 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 GCAP28676 217 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 SARNPP82979 210 aaKnown RBP9.42□□□□□ -0.9
PDPN-201ENST00000294489 NRG1Q02297 640 aaPredicted RBP9.42□□□□□ -0.9
PDPN-201ENST00000294489 FAXCQ5TGI0 409 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 SRLQ86TD4 932 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 TRABD2AQ86V40 505 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 CMTR2Q8IYT2 770 aaKnown RBP9.42□□□□□ -0.9
PDPN-201ENST00000294489 ZNF276Q8N554 614 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 MCUQ8NE86 351 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 LRRN4Q8WUT4 740 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 EDEM1Q92611 657 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 MRRFQ96E11 262 aaKnown RBP9.42□□□□□ -0.9
PDPN-201ENST00000294489 IGSF21Q96ID5 467 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 SMC6Q96SB8 1091 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 FBXO44Q9H4M3 255 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 GGA2Q9UJY4 613 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 RRP15Q9Y3B9 282 aaKnown RBP9.42□□□□□ -0.9
PDPN-201ENST00000294489 TEX264Q9Y6I9 313 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 IKBKGQ9Y6K9 419 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 IRAK2O43187 625 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 MFSD11O43934 449 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 BAIAP3O94812 1187 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 KIAA0754O94854 1291 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 VIMP08670 466 aaKnown RBP9.42□□□□□ -0.9
PDPN-201ENST00000294489 HOXC13P31276 330 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 GBP2P32456 591 aaPredicted RBP9.42□□□□□ -0.9
PDPN-201ENST00000294489 HTR7P34969 479 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 MSH2P43246 934 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 PGFP49763 221 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 TPI1P60174 286 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 BRMS1LQ5PSV4 323 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 MON1AQ86VX9 555 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 GPR65Q8IYL9 337 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 ARHGAP18Q8N392 663 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 CCDC33Q8N5R6 958 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 CCNYQ8ND76 341 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 LRRC39Q96DD0 335 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 SGSM3Q96HU1 749 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 ZNF317Q96PQ6 595 aaPredicted RBP9.42□□□□□ -0.9
PDPN-201ENST00000294489 HAPLN3Q96S86 360 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 TMPRSS4Q9NRS4 437 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 A0A0A0MRY4 1105 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 FAM47DPA6NHR8 397 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 ZDHHC11BP0C7U3 371 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 TPSB2P20231 275 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 STX2P32856 288 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 FDFT1P37268 417 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 AP1B1Q10567 949 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 LRRC14Q15048 493 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 PRKD1Q15139 912 aaPredicted RBP9.42□□□□□ -0.9
PDPN-201ENST00000294489 TPSAB1Q15661 275 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 MANEALQ5VSG8 457 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 RNF19BQ6ZMZ0 732 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 CACNA2D3Q8IZS8 1091 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 SLC39A11Q8N1S5 342 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 RNF34Q969K3 372 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 B3GALT6Q96L58 329 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 SPATA13Q96N96 652 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 PAFAH2Q99487 392 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 LGMNQ99538 433 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 EPAS1Q99814 870 aa9.42□□□□□ -0.9
PDPN-201ENST00000294489 WDR83Q9BRX9 315 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms