RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 TCP1P17987 556 aaKnown RBP18.39■□□□□ 0.53
CCDC78-201ENST00000293889 KRT81Q14533 505 aa18.39■□□□□ 0.53
CCDC78-201ENST00000293889 PDK2Q15119 407 aa18.39■□□□□ 0.53
CCDC78-201ENST00000293889 PPP6R3Q5H9R7 873 aaPredicted RBP18.39■□□□□ 0.53
CCDC78-201ENST00000293889 FAM72AQ5TYM5 149 aa18.39■□□□□ 0.53
CCDC78-201ENST00000293889 PIK3R6Q5UE93 754 aa18.39■□□□□ 0.53
CCDC78-201ENST00000293889 FAM72DQ6L9T8 149 aa18.39■□□□□ 0.53
CCDC78-201ENST00000293889 MFSD7Q6UXD7 560 aa18.39■□□□□ 0.53
CCDC78-201ENST00000293889 FAM72BQ86X60 149 aa18.39■□□□□ 0.53
CCDC78-201ENST00000293889 DENND1CQ8IV53 801 aa18.39■□□□□ 0.53
CCDC78-201ENST00000293889 ARID3BQ8IVW6 561 aaPredicted RBP18.39■□□□□ 0.53
CCDC78-201ENST00000293889 TTC16Q8NEE8 873 aa18.39■□□□□ 0.53
CCDC78-201ENST00000293889 SH3RF2Q8TEC5 729 aa18.39■□□□□ 0.53
CCDC78-201ENST00000293889 RBM41Q96IZ5 413 aaKnown RBP18.39■□□□□ 0.53
CCDC78-201ENST00000293889 PBKQ96KB5 322 aa18.39■□□□□ 0.53
CCDC78-201ENST00000293889 OSBPL2Q9H1P3 480 aa18.39■□□□□ 0.53
CCDC78-201ENST00000293889 GDE1Q9NZC3 331 aa18.39■□□□□ 0.53
CCDC78-201ENST00000293889 OR12D3Q9UGF7 316 aa18.39■□□□□ 0.53
CCDC78-201ENST00000293889 HS3ST4Q9Y661 456 aa18.39■□□□□ 0.53
CCDC78-201ENST00000293889 WEE1P30291 646 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 GGCXP38435 758 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 MLLT6P55198 1093 aaPredicted RBP18.38■□□□□ 0.53
CCDC78-201ENST00000293889 MMRN1Q13201 1228 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 DPYSL3Q14195 570 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 NADSYN1Q6IA69 706 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 SPOCD1Q6ZMY3 1216 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 CCDC50Q8IVM0 306 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 AZIN2Q96A70 460 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 C1orf74Q96LT6 269 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 CALN1Q9BXU9 219 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 AGO1Q9UL18 857 aaKnown RBP18.38■□□□□ 0.53
CCDC78-201ENST00000293889 CDH7Q9ULB5 785 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 SCAMP3O14828 347 aaKnown RBP18.38■□□□□ 0.53
CCDC78-201ENST00000293889 CEP104O60308 925 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 ACSL4O60488 711 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 IL4RP24394 825 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 CDKN2BP42772 138 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 SLC11A2P49281 568 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 SEMA3BQ13214 749 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 MTA1Q13330 715 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 LLGL1Q15334 1064 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 TAZQ16635 292 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 MS4A13Q5J8X5 152 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 FAM78AQ5JUQ0 283 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 DDX42Q86XP3 938 aaKnown RBP eCLIP18.38■□□□□ 0.53
CCDC78-201ENST00000293889 MAP7D3Q8IWC1 876 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 RIN3Q8TB24 985 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 MS4A14Q96JA4 679 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 MYADMQ96S97 322 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 PHF7Q9BWX1 381 aaPredicted RBP18.38■□□□□ 0.53
CCDC78-201ENST00000293889 DCLK3Q9C098 648 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 PSD3Q9NYI0 1048 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 CWC15Q9P013 229 aaKnown RBP18.38■□□□□ 0.53
CCDC78-201ENST00000293889 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.38■□□□□ 0.53
CCDC78-201ENST00000293889 FAM50BQ9Y247 325 aa18.38■□□□□ 0.53
CCDC78-201ENST00000293889 HELZP42694 1942 aaKnown RBP18.37■□□□□ 0.53
CCDC78-201ENST00000293889 GOLGA6L7A0A1B0GV03 622 aa18.37■□□□□ 0.53
CCDC78-201ENST00000293889 CES2O00748 559 aa18.37■□□□□ 0.53
CCDC78-201ENST00000293889 CREB3O43889 395 aa18.37■□□□□ 0.53
CCDC78-201ENST00000293889 SP100P23497 879 aaPredicted RBP18.37■□□□□ 0.53
CCDC78-201ENST00000293889 COPS2P61201 443 aa18.37■□□□□ 0.53
CCDC78-201ENST00000293889 ARTNQ5T4W7 220 aa18.37■□□□□ 0.53
CCDC78-201ENST00000293889 RAP1GAP2Q684P5 730 aa18.37■□□□□ 0.53
CCDC78-201ENST00000293889 Q6ZNB5 142 aa18.37■□□□□ 0.53
CCDC78-201ENST00000293889 HTR3DQ70Z44 454 aa18.37■□□□□ 0.53
CCDC78-201ENST00000293889 HDXQ7Z353 690 aa18.37■□□□□ 0.53
CCDC78-201ENST00000293889 C14orf80Q86SX3 495 aa18.37■□□□□ 0.53
CCDC78-201ENST00000293889 ASB16Q96NS5 453 aa18.37■□□□□ 0.53
CCDC78-201ENST00000293889 PNKPQ96T60 521 aa18.37■□□□□ 0.53
CCDC78-201ENST00000293889 PRMT1Q99873 361 aaKnown RBP18.37■□□□□ 0.53
CCDC78-201ENST00000293889 LSM7Q9UK45 103 aaKnown RBP18.37■□□□□ 0.53
CCDC78-201ENST00000293889 SH3BP1Q9Y3L3 701 aa18.37■□□□□ 0.53
CCDC78-201ENST00000293889 GOT1P17174 413 aa18.36■□□□□ 0.53
CCDC78-201ENST00000293889 NRG1Q02297 640 aaPredicted RBP18.36■□□□□ 0.53
CCDC78-201ENST00000293889 AUHQ13825 339 aaKnown RBP18.36■□□□□ 0.53
CCDC78-201ENST00000293889 FAM133BQ5BKY9 247 aaKnown RBP18.36■□□□□ 0.53
CCDC78-201ENST00000293889 TFDP3Q5H9I0 405 aa18.36■□□□□ 0.53
CCDC78-201ENST00000293889 SEL1L2Q5TEA6 688 aa18.36■□□□□ 0.53
CCDC78-201ENST00000293889 CREG2Q8IUH2 290 aa18.36■□□□□ 0.53
CCDC78-201ENST00000293889 SMARCD2Q92925 531 aa18.36■□□□□ 0.53
CCDC78-201ENST00000293889 CAPZA3Q96KX2 299 aa18.36■□□□□ 0.53
CCDC78-201ENST00000293889 CSPG4P5Q96PW8 444 aa18.36■□□□□ 0.53
CCDC78-201ENST00000293889 EPAS1Q99814 870 aa18.36■□□□□ 0.53
CCDC78-201ENST00000293889 HERPUD2Q9BSE4 406 aa18.36■□□□□ 0.53
CCDC78-201ENST00000293889 HEMGNQ9BXL5 484 aa18.36■□□□□ 0.53
CCDC78-201ENST00000293889 hCG_1818297A0A087WSY0 165 aa18.35■□□□□ 0.53
CCDC78-201ENST00000293889 E2F8A0AVK6 867 aa18.35■□□□□ 0.53
CCDC78-201ENST00000293889 TARSL2A2RTX5 802 aaKnown RBP18.35■□□□□ 0.53
CCDC78-201ENST00000293889 H3BRJ5 948 aa18.35■□□□□ 0.53
CCDC78-201ENST00000293889 EEF2KO00418 725 aaKnown RBP18.35■□□□□ 0.53
CCDC78-201ENST00000293889 LRIG2O94898 1065 aa18.35■□□□□ 0.53
CCDC78-201ENST00000293889 LATS1O95835 1130 aa18.35■□□□□ 0.53
CCDC78-201ENST00000293889 KRT10P13645 584 aa18.35■□□□□ 0.53
CCDC78-201ENST00000293889 TCF3P15923 654 aa18.35■□□□□ 0.53
CCDC78-201ENST00000293889 MCM3P25205 808 aa18.35■□□□□ 0.53
CCDC78-201ENST00000293889 OAS2P29728 719 aaKnown RBP18.35■□□□□ 0.53
CCDC78-201ENST00000293889 SLC6A4P31645 630 aa18.35■□□□□ 0.53
CCDC78-201ENST00000293889 PTPN7P35236 360 aa18.35■□□□□ 0.53
CCDC78-201ENST00000293889 ARL4AP40617 200 aa18.35■□□□□ 0.53
CCDC78-201ENST00000293889 VIPR2P41587 438 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms