RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 TBL1XO60907 577 aa27.83■■■□□ 2.05
SSU72-201ENST00000291386 DESP17661 470 aa27.83■■■□□ 2.05
SSU72-201ENST00000291386 TNFRSF4P43489 277 aa27.83■■■□□ 2.05
SSU72-201ENST00000291386 RAB6CQ53S08 254 aa27.83■■■□□ 2.05
SSU72-201ENST00000291386 NUDT18Q6ZVK8 323 aa27.83■■■□□ 2.05
SSU72-201ENST00000291386 ZNF557Q8N988 423 aaPredicted RBP27.83■■■□□ 2.05
SSU72-201ENST00000291386 MYEOVQ96EZ4 313 aa27.83■■■□□ 2.05
SSU72-201ENST00000291386 RAB6CQ9H0N0 254 aa27.83■■■□□ 2.05
SSU72-201ENST00000291386 CLEC4EQ9ULY5 219 aa27.83■■■□□ 2.05
SSU72-201ENST00000291386 TRIM24O15164 1050 aa27.82■■■□□ 2.04
SSU72-201ENST00000291386 KDSRQ06136 332 aa27.82■■■□□ 2.04
SSU72-201ENST00000291386 AUHQ13825 339 aaKnown RBP27.82■■■□□ 2.04
SSU72-201ENST00000291386 ARL13BQ3SXY8 428 aa27.82■■■□□ 2.04
SSU72-201ENST00000291386 TTC39BQ5VTQ0 682 aaPredicted RBP27.82■■■□□ 2.04
SSU72-201ENST00000291386 FBXL22Q6P050 247 aa27.82■■■□□ 2.04
SSU72-201ENST00000291386 CCDC170Q8IYT3 715 aa27.82■■■□□ 2.04
SSU72-201ENST00000291386 LGI2Q8N0V4 545 aa27.82■■■□□ 2.04
SSU72-201ENST00000291386 NTAN1Q96AB6 310 aa27.82■■■□□ 2.04
SSU72-201ENST00000291386 STARD13Q9Y3M8 1113 aa27.82■■■□□ 2.04
SSU72-201ENST00000291386 CHURC1-FNTBB4DL54 471 aa27.81■■■□□ 2.04
SSU72-201ENST00000291386 H2AFZP0C0S5 128 aa27.81■■■□□ 2.04
SSU72-201ENST00000291386 PSMA2P25787 234 aa27.81■■■□□ 2.04
SSU72-201ENST00000291386 ADRA1BP35368 520 aa27.81■■■□□ 2.04
SSU72-201ENST00000291386 ZNF252P-AS1Q0IIN9 211 aa27.81■■■□□ 2.04
SSU72-201ENST00000291386 GAS6Q14393 721 aa27.81■■■□□ 2.04
SSU72-201ENST00000291386 RABGAP1LQ5R372 815 aa27.81■■■□□ 2.04
SSU72-201ENST00000291386 H2AFVQ71UI9 128 aa27.81■■■□□ 2.04
SSU72-201ENST00000291386 KCNV2Q8TDN2 545 aa27.81■■■□□ 2.04
SSU72-201ENST00000291386 ARHGEF26Q96DR7 871 aa27.81■■■□□ 2.04
SSU72-201ENST00000291386 PRRX2Q99811 253 aa27.81■■■□□ 2.04
SSU72-201ENST00000291386 SPTLC3Q9NUV7 552 aa27.81■■■□□ 2.04
SSU72-201ENST00000291386 TBC1D3BA6NDS4 549 aa27.8■■■□□ 2.04
SSU72-201ENST00000291386 RNF40O75150 1001 aa27.8■■■□□ 2.04
SSU72-201ENST00000291386 LCA5LO95447 670 aa27.8■■■□□ 2.04
SSU72-201ENST00000291386 TMEM253P0C7T8 217 aa27.8■■■□□ 2.04
SSU72-201ENST00000291386 CHRM1P11229 460 aaPredicted RBP27.8■■■□□ 2.04
SSU72-201ENST00000291386 AIF1P55008 147 aa27.8■■■□□ 2.04
SSU72-201ENST00000291386 RPS24P62847 133 aaKnown RBP27.8■■■□□ 2.04
SSU72-201ENST00000291386 SCAPQ12770 1279 aa27.8■■■□□ 2.04
SSU72-201ENST00000291386 ACAP1Q15027 740 aa27.8■■■□□ 2.04
SSU72-201ENST00000291386 C10orf76Q5T2E6 689 aa27.8■■■□□ 2.04
SSU72-201ENST00000291386 Q6ZS52 159 aa27.8■■■□□ 2.04
SSU72-201ENST00000291386 TMTC1Q8IUR5 882 aa27.8■■■□□ 2.04
SSU72-201ENST00000291386 ZNF683Q8IZ20 524 aa27.8■■■□□ 2.04
SSU72-201ENST00000291386 SPEM1Q8N4L4 309 aa27.8■■■□□ 2.04
SSU72-201ENST00000291386 DDX51Q8N8A6 666 aaKnown RBP eCLIP27.8■■■□□ 2.04
SSU72-201ENST00000291386 FIBINQ8TAL6 211 aa27.8■■■□□ 2.04
SSU72-201ENST00000291386 OSBPL2Q9H1P3 480 aa27.8■■■□□ 2.04
SSU72-201ENST00000291386 KCNH6Q9H252 994 aa27.8■■■□□ 2.04
SSU72-201ENST00000291386 GALR2O43603 387 aaPredicted RBP27.79■■■□□ 2.04
SSU72-201ENST00000291386 MRPS21P82921 87 aaKnown RBP27.79■■■□□ 2.04
SSU72-201ENST00000291386 NRG1Q02297 640 aaPredicted RBP27.79■■■□□ 2.04
SSU72-201ENST00000291386 MTAPQ13126 283 aa27.79■■■□□ 2.04
SSU72-201ENST00000291386 KIAA0907Q7Z7F0 614 aaPredicted RBP27.79■■■□□ 2.04
SSU72-201ENST00000291386 CTNNBL1Q8WYA6 563 aaPredicted RBP27.79■■■□□ 2.04
SSU72-201ENST00000291386 NCAPGQ9BPX3 1015 aa27.79■■■□□ 2.04
SSU72-201ENST00000291386 NUP85Q9BW27 656 aa27.79■■■□□ 2.04
SSU72-201ENST00000291386 PACSIN1Q9BY11 444 aa27.79■■■□□ 2.04
SSU72-201ENST00000291386 TRIM7Q9C029 511 aa27.79■■■□□ 2.04
SSU72-201ENST00000291386 SIK2Q9H0K1 926 aa27.79■■■□□ 2.04
SSU72-201ENST00000291386 TMPRSS4Q9NRS4 437 aa27.79■■■□□ 2.04
SSU72-201ENST00000291386 UVRAGQ9P2Y5 699 aa27.79■■■□□ 2.04
SSU72-201ENST00000291386 INTUQ9ULD6 942 aa27.79■■■□□ 2.04
SSU72-201ENST00000291386 ATG13O75143 517 aa27.78■■■□□ 2.04
SSU72-201ENST00000291386 KIR2DL1P43626 348 aaPredicted RBP27.78■■■□□ 2.04
SSU72-201ENST00000291386 ARTNQ5T4W7 220 aa27.78■■■□□ 2.04
SSU72-201ENST00000291386 C14orf80Q86SX3 495 aa27.78■■■□□ 2.04
SSU72-201ENST00000291386 SFTPA1Q8IWL2 248 aa27.78■■■□□ 2.04
SSU72-201ENST00000291386 CFAP52Q8N1V2 620 aa27.78■■■□□ 2.04
SSU72-201ENST00000291386 USP33Q8TEY7 942 aa27.78■■■□□ 2.04
SSU72-201ENST00000291386 IGSF8Q969P0 613 aa27.78■■■□□ 2.04
SSU72-201ENST00000291386 LMLNQ96KR4 655 aa27.78■■■□□ 2.04
SSU72-201ENST00000291386 GRPEL1Q9HAV7 217 aa27.78■■■□□ 2.04
SSU72-201ENST00000291386 VANGL2Q9ULK5 521 aa27.78■■■□□ 2.04
SSU72-201ENST00000291386 ATG2BQ96BY7 2078 aa27.77■■■□□ 2.04
SSU72-201ENST00000291386 IGLV3-10A0A075B6K4 115 aa27.77■■■□□ 2.04
SSU72-201ENST00000291386 DRGXA6NNA5 263 aa27.77■■■□□ 2.04
SSU72-201ENST00000291386 PRRT4C9JH25 899 aa27.77■■■□□ 2.04
SSU72-201ENST00000291386 LUC7L3O95232 432 aaKnown RBP27.77■■■□□ 2.04
SSU72-201ENST00000291386 HLA-FP30511 346 aa27.77■■■□□ 2.04
SSU72-201ENST00000291386 HSF5Q4G112 596 aaPredicted RBP27.77■■■□□ 2.04
SSU72-201ENST00000291386 ANKS1BQ7Z6G8 1248 aa27.77■■■□□ 2.04
SSU72-201ENST00000291386 SLFN11Q7Z7L1 901 aa27.77■■■□□ 2.04
SSU72-201ENST00000291386 C1orf210Q8IVY1 113 aa27.77■■■□□ 2.04
SSU72-201ENST00000291386 MFN1Q8IWA4 741 aa27.77■■■□□ 2.04
SSU72-201ENST00000291386 ARFGAP1Q8N6T3 406 aa27.77■■■□□ 2.04
SSU72-201ENST00000291386 CCDC185Q8N715 623 aa27.77■■■□□ 2.04
SSU72-201ENST00000291386 SPC24Q8NBT2 197 aa27.77■■■□□ 2.04
SSU72-201ENST00000291386 WFIKKN2Q8TEU8 576 aa27.77■■■□□ 2.04
SSU72-201ENST00000291386 RPRD1AQ96P16 312 aaPredicted RBP27.77■■■□□ 2.04
SSU72-201ENST00000291386 SPATA6Q9NWH7 488 aaPredicted RBP27.77■■■□□ 2.04
SSU72-201ENST00000291386 STIM2Q9P246 746 aa27.77■■■□□ 2.04
SSU72-201ENST00000291386 DOCK4Q8N1I0 1966 aa27.77■■■□□ 2.04
SSU72-201ENST00000291386 A0A1B0GVM2 712 aa27.76■■■□□ 2.03
SSU72-201ENST00000291386 GOLGA6L3A6NEY3 463 aa27.76■■■□□ 2.03
SSU72-201ENST00000291386 TCAF2A6NFQ2 919 aa27.76■■■□□ 2.03
SSU72-201ENST00000291386 GOLGA6L6A8MZA4 724 aa27.76■■■□□ 2.03
SSU72-201ENST00000291386 RNF8O76064 485 aa27.76■■■□□ 2.03
SSU72-201ENST00000291386 PAPSS2O95340 614 aaPredicted RBP27.76■■■□□ 2.03
SSU72-201ENST00000291386 CYLC1P35663 651 aaPredicted RBP27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms