RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 DCLRE1AQ6PJP8 1040 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 ZNF554Q86TJ5 538 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 EFCAB1Q9HAE3 211 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 CTNNAL1Q9UBT7 734 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 GTF2IRD1Q9UHL9 959 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 ABHD14A-ACY1A0A1B0GW23 586 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 FOXN3O00409 490 aaPredicted RBP11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 WBP4O75554 376 aaKnown RBP11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 PAMP19021 973 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 TFE3P19532 575 aaPredicted RBP11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 SP100P23497 879 aaPredicted RBP11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 MTTPP55157 894 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 ITGADQ13349 1161 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 AUHQ13825 339 aaKnown RBP11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 AMHR2Q16671 573 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 SLC5A9Q2M3M2 681 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 CNKSR3Q6P9H4 555 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 RBM44Q6ZP01 1051 aaKnown RBP11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 FBXO36Q8NEA4 188 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 TCP10LQ8TDR4 215 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 HSD17B14Q9BPX1 270 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 LRMDAQ9H2I8 198 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 SLC24A2Q9UI40 661 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 AGPSO00116 658 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 LSM1O15116 133 aaKnown RBP11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 LCA5LO95447 670 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 SGPL1O95470 568 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 DMC1Q14565 340 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 TRADDQ15628 312 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 ANGPTL8Q6UXH0 198 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 RINLQ6ZS11 566 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 TERB1Q8NA31 727 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 FLCNQ8NFG4 579 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 PPP1R13LQ8WUF5 828 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 GLMNQ92990 594 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 BBS2Q9BXC9 721 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 OXCT2Q9BYC2 517 aaPredicted RBP11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 ASPSCR1Q9BZE9 553 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 ELOVL4Q9GZR5 314 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 TASP1Q9H6P5 420 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 TLR8Q9NR97 1041 aaKnown RBP11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 A0A0A6YYK5 440 aaPredicted RBP11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 EME2A4GXA9 379 aaPredicted RBP11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 MGRN1O60291 552 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 PPP2R2DQ66LE6 453 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 VPS50Q96JG6 964 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 DHX35Q9H5Z1 703 aaKnown RBP11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 RUBCNLQ9H714 662 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 SH3GLB1Q9Y371 365 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 NID2Q14112 1375 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 CES2O00748 559 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 FESP07332 822 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 GRM5P41594 1212 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 MAPK10P53779 464 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 TPI1P60174 286 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 TRIM25Q14258 630 aaKnown RBP11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 PDK3Q15120 406 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 WDR59Q6PJI9 974 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 PID1Q7Z2X4 250 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 NPAS4Q8IUM7 802 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 SPATA18Q8TC71 538 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 CALML6Q8TD86 181 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 GIPC3Q8TF64 312 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 SCFD1Q8WVM8 642 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 IFT43Q96FT9 208 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 TRMT13Q9NUP7 481 aaKnown RBP11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 MYRFQ9Y2G1 1151 aa11.65□□□□□ -0.54
NPC1L1-201ENST00000289547 TAF4O00268 1085 aa11.65□□□□□ -0.55
NPC1L1-201ENST00000289547 TM9SF1O15321 606 aa11.65□□□□□ -0.55
NPC1L1-201ENST00000289547 ITGBL1O95965 494 aaPredicted RBP11.65□□□□□ -0.55
NPC1L1-201ENST00000289547 ARHGAP1Q07960 439 aa11.65□□□□□ -0.55
NPC1L1-201ENST00000289547 STX5Q13190 355 aa11.65□□□□□ -0.55
NPC1L1-201ENST00000289547 TSTA3Q13630 321 aaPredicted RBP11.65□□□□□ -0.55
NPC1L1-201ENST00000289547 PRUNE1Q86TP1 453 aa11.65□□□□□ -0.55
NPC1L1-201ENST00000289547 HERC6Q8IVU3 1022 aa11.65□□□□□ -0.55
NPC1L1-201ENST00000289547 ANKLE1Q8NAG6 615 aa11.65□□□□□ -0.55
NPC1L1-201ENST00000289547 CSGALNACT1Q8TDX6 532 aa11.65□□□□□ -0.55
NPC1L1-201ENST00000289547 DIS3LQ8TF46 1054 aaKnown RBP11.65□□□□□ -0.55
NPC1L1-201ENST00000289547 TRIB2Q92519 343 aa11.65□□□□□ -0.55
NPC1L1-201ENST00000289547 ACSF2Q96CM8 615 aaPredicted RBP11.65□□□□□ -0.55
NPC1L1-201ENST00000289547 C11orf84Q9BUA3 381 aaPredicted RBP11.65□□□□□ -0.55
NPC1L1-201ENST00000289547 MFSD1Q9H3U5 465 aa11.65□□□□□ -0.55
NPC1L1-201ENST00000289547 RABGEF1Q9UJ41 708 aa11.65□□□□□ -0.55
NPC1L1-201ENST00000289547 CFAP99D6REC4 459 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 E9PBE3 544 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 ASNA1O43681 348 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 KLHL41O60662 606 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 CCNE2O96020 404 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 CKBP12277 381 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 ACO1P21399 889 aaKnown RBP11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 NCKAP1LP55160 1127 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 JAG1P78504 1218 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 CDK16Q00536 496 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 RUNX1T1Q06455 604 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 NSUN2Q08J23 767 aaKnown RBP eCLIP11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 ZNF235Q14590 738 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 FAM71DQ8N9W8 422 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 ABHD8Q96I13 439 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 ACO2Q99798 780 aaKnown RBP11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 COG4Q9H9E3 785 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms