RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 ABHD8Q96I13 439 aa14.55□□□□□ -0.08
SS18-201ENST00000269137 BTN2A3PQ96KV6 586 aa14.55□□□□□ -0.08
SS18-201ENST00000269137 SAMD11Q96NU1 681 aa14.55□□□□□ -0.08
SS18-201ENST00000269137 TXLNGYQ9BZA5 131 aa14.55□□□□□ -0.08
SS18-201ENST00000269137 SIK2Q9H0K1 926 aa14.55□□□□□ -0.08
SS18-201ENST00000269137 ADAM7Q9H2U9 754 aa14.55□□□□□ -0.08
SS18-201ENST00000269137 ANAPC5Q9UJX4 755 aa14.55□□□□□ -0.08
SS18-201ENST00000269137 HS3ST4Q9Y661 456 aa14.55□□□□□ -0.08
SS18-201ENST00000269137 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.55□□□□□ -0.08
SS18-201ENST00000269137 NCAM2O15394 837 aa14.55□□□□□ -0.08
SS18-201ENST00000269137 FGF10O15520 208 aaPredicted RBP14.55□□□□□ -0.08
SS18-201ENST00000269137 PPFIA2O75334 1257 aa14.55□□□□□ -0.08
SS18-201ENST00000269137 SPATA31D3P0C874 917 aa14.55□□□□□ -0.08
SS18-201ENST00000269137 RBL1P28749 1068 aa14.55□□□□□ -0.08
SS18-201ENST00000269137 SERPINB6P35237 376 aa14.55□□□□□ -0.08
SS18-201ENST00000269137 PIK3R6Q5UE93 754 aa14.55□□□□□ -0.08
SS18-201ENST00000269137 IZUMO3Q5VZ72 239 aa14.55□□□□□ -0.08
SS18-201ENST00000269137 NUGGCQ68CJ6 796 aa14.55□□□□□ -0.08
SS18-201ENST00000269137 HIBCHQ6NVY1 386 aaPredicted RBP14.55□□□□□ -0.08
SS18-201ENST00000269137 SPATA31D4Q6ZUB0 917 aa14.55□□□□□ -0.08
SS18-201ENST00000269137 TMC3Q7Z5M5 1100 aa14.55□□□□□ -0.08
SS18-201ENST00000269137 KREMEN2Q8NCW0 462 aa14.55□□□□□ -0.08
SS18-201ENST00000269137 TFB1MQ8WVM0 346 aaKnown RBP14.55□□□□□ -0.08
SS18-201ENST00000269137 TBC1D31Q96DN5 1066 aa14.55□□□□□ -0.08
SS18-201ENST00000269137 FOXP3Q9BZS1 431 aa14.55□□□□□ -0.08
SS18-201ENST00000269137 BRD8Q9H0E9 1235 aa14.55□□□□□ -0.08
SS18-201ENST00000269137 XPO7Q9UIA9 1087 aaKnown RBP14.55□□□□□ -0.08
SS18-201ENST00000269137 TPX2Q9ULW0 747 aaKnown RBP14.55□□□□□ -0.08
SS18-201ENST00000269137 HPCAL4Q9UM19 191 aa14.55□□□□□ -0.08
SS18-201ENST00000269137 MYO7AQ13402 2215 aa14.54□□□□□ -0.08
SS18-201ENST00000269137 ANAPC1Q9H1A4 1944 aa14.54□□□□□ -0.08
SS18-201ENST00000269137 HIDE1A8MVS5 230 aa14.54□□□□□ -0.08
SS18-201ENST00000269137 KCNN4O15554 427 aa14.54□□□□□ -0.08
SS18-201ENST00000269137 ARHGEF15O94989 841 aa14.54□□□□□ -0.08
SS18-201ENST00000269137 MAP3K6O95382 1288 aa14.54□□□□□ -0.08
SS18-201ENST00000269137 MOCS2O96007 188 aaPredicted RBP14.54□□□□□ -0.08
SS18-201ENST00000269137 GLUD1P00367 558 aa14.54□□□□□ -0.08
SS18-201ENST00000269137 F11P03951 625 aa14.54□□□□□ -0.08
SS18-201ENST00000269137 MYOGP15173 224 aa14.54□□□□□ -0.08
SS18-201ENST00000269137 MORF4L2Q15014 288 aa14.54□□□□□ -0.08
SS18-201ENST00000269137 PRKD1Q15139 912 aaPredicted RBP14.54□□□□□ -0.08
SS18-201ENST00000269137 SHHQ15465 462 aa14.54□□□□□ -0.08
SS18-201ENST00000269137 PABPC1LQ4VXU2 614 aaKnown RBP14.54□□□□□ -0.08
SS18-201ENST00000269137 SPDYCQ5MJ68 293 aa14.54□□□□□ -0.08
SS18-201ENST00000269137 PLPP4Q5VZY2 271 aa14.54□□□□□ -0.08
SS18-201ENST00000269137 C4orf22Q6V702 233 aa14.54□□□□□ -0.08
SS18-201ENST00000269137 PCGF5Q86SE9 256 aa14.54□□□□□ -0.08
SS18-201ENST00000269137 TMEM150AQ86TG1 271 aa14.54□□□□□ -0.08
SS18-201ENST00000269137 ZNF683Q8IZ20 524 aa14.54□□□□□ -0.08
SS18-201ENST00000269137 CATSPERBQ9H7T0 1116 aa14.54□□□□□ -0.08
SS18-201ENST00000269137 PCDHA11Q9Y5I1 949 aa14.54□□□□□ -0.08
SS18-201ENST00000269137 NUP205Q92621 2012 aa14.54□□□□□ -0.08
SS18-201ENST00000269137 MTCL1Q9Y4B5 1905 aaKnown RBP14.53□□□□□ -0.08
SS18-201ENST00000269137 C5orf60A6NFR6 353 aa14.53□□□□□ -0.08
SS18-201ENST00000269137 GRXCR1A8MXD5 290 aa14.53□□□□□ -0.08
SS18-201ENST00000269137 E9PAM4 449 aa14.53□□□□□ -0.08
SS18-201ENST00000269137 PPP1R12AO14974 1030 aaPredicted RBP14.53□□□□□ -0.08
SS18-201ENST00000269137 COCHO43405 550 aa14.53□□□□□ -0.08
SS18-201ENST00000269137 GCATO75600 419 aa14.53□□□□□ -0.08
SS18-201ENST00000269137 OAS1P00973 400 aaKnown RBP14.53□□□□□ -0.08
SS18-201ENST00000269137 SRGAP2BP0DMP2 458 aa14.53□□□□□ -0.08
SS18-201ENST00000269137 MX2P20592 715 aa14.53□□□□□ -0.08
SS18-201ENST00000269137 GGCXP38435 758 aa14.53□□□□□ -0.08
SS18-201ENST00000269137 COG7P83436 770 aa14.53□□□□□ -0.08
SS18-201ENST00000269137 DHX9Q08211 1270 aaKnown RBP14.53□□□□□ -0.08
SS18-201ENST00000269137 CAMK1Q14012 370 aa14.53□□□□□ -0.08
SS18-201ENST00000269137 RNASEH2BQ5TBB1 312 aaKnown RBP14.53□□□□□ -0.08
SS18-201ENST00000269137 ALS2CLQ60I27 953 aa14.53□□□□□ -0.08
SS18-201ENST00000269137 FAM109BQ6ICB4 259 aaPredicted RBP14.53□□□□□ -0.08
SS18-201ENST00000269137 LZTR1Q8N653 840 aa14.53□□□□□ -0.08
SS18-201ENST00000269137 TSEN2Q8NCE0 465 aaKnown RBP14.53□□□□□ -0.08
SS18-201ENST00000269137 TGS1Q96RS0 853 aaKnown RBP14.53□□□□□ -0.08
SS18-201ENST00000269137 PRDM12Q9H4Q4 367 aa14.53□□□□□ -0.08
SS18-201ENST00000269137 IL21Q9HBE4 155 aa14.53□□□□□ -0.08
SS18-201ENST00000269137 PAK5Q9P286 719 aa14.53□□□□□ -0.08
SS18-201ENST00000269137 PPARGC1AQ9UBK2 798 aaKnown RBP14.53□□□□□ -0.08
SS18-201ENST00000269137 IGLV3-10A0A075B6K4 115 aa14.52□□□□□ -0.08
SS18-201ENST00000269137 WASH4PA8MWX3 477 aa14.52□□□□□ -0.08
SS18-201ENST00000269137 SMAPO00193 183 aa14.52□□□□□ -0.08
SS18-201ENST00000269137 GRM6O15303 877 aa14.52□□□□□ -0.08
SS18-201ENST00000269137 LPXNO60711 386 aa14.52□□□□□ -0.08
SS18-201ENST00000269137 LRG1P02750 347 aa14.52□□□□□ -0.08
SS18-201ENST00000269137 C8AP07357 584 aa14.52□□□□□ -0.08
SS18-201ENST00000269137 CA3P07451 260 aa14.52□□□□□ -0.08
SS18-201ENST00000269137 ACTN2P35609 894 aa14.52□□□□□ -0.08
SS18-201ENST00000269137 ERVK-21P61565 698 aa14.52□□□□□ -0.08
SS18-201ENST00000269137 GALNT2Q10471 571 aa14.52□□□□□ -0.08
SS18-201ENST00000269137 AUHQ13825 339 aaKnown RBP14.52□□□□□ -0.08
SS18-201ENST00000269137 SLMAPQ14BN4 828 aa14.52□□□□□ -0.08
SS18-201ENST00000269137 MS4A13Q5J8X5 152 aa14.52□□□□□ -0.08
SS18-201ENST00000269137 HEATR6Q6AI08 1181 aaKnown RBP14.52□□□□□ -0.08
SS18-201ENST00000269137 PDE12Q6L8Q7 609 aaKnown RBP14.52□□□□□ -0.08
SS18-201ENST00000269137 RWDD4Q6NW29 188 aaKnown RBP14.52□□□□□ -0.08
SS18-201ENST00000269137 B4GALNT4Q76KP1 1039 aa14.52□□□□□ -0.08
SS18-201ENST00000269137 SPRED2Q7Z698 418 aa14.52□□□□□ -0.08
SS18-201ENST00000269137 C14orf80Q86SX3 495 aa14.52□□□□□ -0.08
SS18-201ENST00000269137 IQCKQ8N0W5 287 aa14.52□□□□□ -0.08
SS18-201ENST00000269137 NPWQ8N729 165 aa14.52□□□□□ -0.08
SS18-201ENST00000269137 AZIN2Q96A70 460 aa14.52□□□□□ -0.08
SS18-201ENST00000269137 PLD4Q96BZ4 506 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms