RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 GOLGA6L10A6NI86 522 aa15.85■□□□□ 0.13
COPS3-201ENST00000268717 EIF3HO15372 352 aaKnown RBP eCLIP15.85■□□□□ 0.13
COPS3-201ENST00000268717 NCAM2O15394 837 aa15.85■□□□□ 0.13
COPS3-201ENST00000268717 RIPK2O43353 540 aa15.85■□□□□ 0.13
COPS3-201ENST00000268717 ETS1P14921 441 aa15.85■□□□□ 0.13
COPS3-201ENST00000268717 AMPD1P23109 780 aa15.85■□□□□ 0.13
COPS3-201ENST00000268717 CHKAP35790 457 aa15.85■□□□□ 0.13
COPS3-201ENST00000268717 PPM1AP35813 382 aa15.85■□□□□ 0.13
COPS3-201ENST00000268717 TUFMP49411 452 aaKnown RBP15.85■□□□□ 0.13
COPS3-201ENST00000268717 TPI1P60174 286 aa15.85■□□□□ 0.13
COPS3-201ENST00000268717 NRG1Q02297 640 aaPredicted RBP15.85■□□□□ 0.13
COPS3-201ENST00000268717 PDK1Q15118 436 aa15.85■□□□□ 0.13
COPS3-201ENST00000268717 ACBD5Q5T8D3 534 aaPredicted RBP15.85■□□□□ 0.13
COPS3-201ENST00000268717 TPGS2Q68CL5 300 aa15.85■□□□□ 0.13
COPS3-201ENST00000268717 ZNF276Q8N554 614 aa15.85■□□□□ 0.13
COPS3-201ENST00000268717 NAT8LQ8N9F0 302 aa15.85■□□□□ 0.13
COPS3-201ENST00000268717 RIN2Q8WYP3 895 aaPredicted RBP15.85■□□□□ 0.13
COPS3-201ENST00000268717 PRCCQ92733 491 aaPredicted RBP15.85■□□□□ 0.13
COPS3-201ENST00000268717 HLA-CQ95604 372 aa15.85■□□□□ 0.13
COPS3-201ENST00000268717 TMEM169Q96HH4 297 aa15.85■□□□□ 0.13
COPS3-201ENST00000268717 FERMT1Q9BQL6 677 aa15.85■□□□□ 0.13
COPS3-201ENST00000268717 FRMD8Q9BZ67 464 aaPredicted RBP15.85■□□□□ 0.13
COPS3-201ENST00000268717 ANLNQ9NQW6 1124 aa15.85■□□□□ 0.13
COPS3-201ENST00000268717 AFF4Q9UHB7 1163 aaKnown RBP15.85■□□□□ 0.13
COPS3-201ENST00000268717 MAFFQ9ULX9 164 aa15.85■□□□□ 0.13
COPS3-201ENST00000268717 TCF20Q9UGU0 1960 aaKnown RBP15.84■□□□□ 0.13
COPS3-201ENST00000268717 WDR27A2RRH5 827 aa15.84■□□□□ 0.13
COPS3-201ENST00000268717 C5orf60A6NFR6 353 aa15.84■□□□□ 0.13
COPS3-201ENST00000268717 I6L893 689 aaPredicted RBP15.84■□□□□ 0.13
COPS3-201ENST00000268717 GCATO75600 419 aa15.84■□□□□ 0.13
COPS3-201ENST00000268717 CSPG5O95196 566 aa15.84■□□□□ 0.13
COPS3-201ENST00000268717 ZDHHC11BP0C7U3 371 aa15.84■□□□□ 0.13
COPS3-201ENST00000268717 MYZAPP0CAP1 466 aa15.84■□□□□ 0.13
COPS3-201ENST00000268717 SLC2A3P11169 496 aa15.84■□□□□ 0.13
COPS3-201ENST00000268717 HOXC13P31276 330 aa15.84■□□□□ 0.13
COPS3-201ENST00000268717 MAGEA6P43360 314 aa15.84■□□□□ 0.13
COPS3-201ENST00000268717 GPR15P49685 360 aa15.84■□□□□ 0.13
COPS3-201ENST00000268717 TFF2Q03403 129 aa15.84■□□□□ 0.13
COPS3-201ENST00000268717 GABPB1Q06547 395 aaPredicted RBP15.84■□□□□ 0.13
COPS3-201ENST00000268717 ZNF844Q08AG5 666 aa15.84■□□□□ 0.13
COPS3-201ENST00000268717 SLC10A2Q12908 348 aaPredicted RBP15.84■□□□□ 0.13
COPS3-201ENST00000268717 MTA1Q13330 715 aa15.84■□□□□ 0.13
COPS3-201ENST00000268717 MGAT5BQ3V5L5 792 aa15.84■□□□□ 0.13
COPS3-201ENST00000268717 KIAA1841Q6NSI8 718 aa15.84■□□□□ 0.13
COPS3-201ENST00000268717 PRSS55Q6UWB4 352 aaPredicted RBP15.84■□□□□ 0.13
COPS3-201ENST00000268717 PRUNE1Q86TP1 453 aa15.84■□□□□ 0.13
COPS3-201ENST00000268717 OVCA2Q8WZ82 227 aa15.84■□□□□ 0.13
COPS3-201ENST00000268717 CPT1BQ92523 772 aa15.84■□□□□ 0.13
COPS3-201ENST00000268717 TTC25Q96NG3 672 aa15.84■□□□□ 0.13
COPS3-201ENST00000268717 CDK5RAP1Q96SZ6 601 aaKnown RBP15.84■□□□□ 0.13
COPS3-201ENST00000268717 MAGEB5Q9BZ81 275 aa15.84■□□□□ 0.13
COPS3-201ENST00000268717 CDC42EP4Q9H3Q1 356 aaKnown RBP15.84■□□□□ 0.13
COPS3-201ENST00000268717 SEMA4AQ9H3S1 761 aa15.84■□□□□ 0.13
COPS3-201ENST00000268717 NMUR1Q9HB89 426 aa15.84■□□□□ 0.13
COPS3-201ENST00000268717 TLR8Q9NR97 1041 aaKnown RBP15.84■□□□□ 0.13
COPS3-201ENST00000268717 ETNK2Q9NVF9 386 aa15.84■□□□□ 0.13
COPS3-201ENST00000268717 SPG21Q9NZD8 308 aa15.84■□□□□ 0.13
COPS3-201ENST00000268717 LZTS1Q9Y250 596 aa15.84■□□□□ 0.13
COPS3-201ENST00000268717 TLR6Q9Y2C9 796 aa15.84■□□□□ 0.13
COPS3-201ENST00000268717 HMGB1P1B2RPK0 211 aaPredicted RBP15.83■□□□□ 0.13
COPS3-201ENST00000268717 PPP1R12AO14974 1030 aaPredicted RBP15.83■□□□□ 0.13
COPS3-201ENST00000268717 CHADO15335 359 aa15.83■□□□□ 0.13
COPS3-201ENST00000268717 KCNN4O15554 427 aa15.83■□□□□ 0.13
COPS3-201ENST00000268717 CREB3O43889 395 aa15.83■□□□□ 0.13
COPS3-201ENST00000268717 TTC4O95801 387 aa15.83■□□□□ 0.13
COPS3-201ENST00000268717 ABHD2P08910 425 aa15.83■□□□□ 0.13
COPS3-201ENST00000268717 RBL1P28749 1068 aa15.83■□□□□ 0.13
COPS3-201ENST00000268717 SERPINB6P35237 376 aa15.83■□□□□ 0.13
COPS3-201ENST00000268717 IRS1P35568 1242 aa15.83■□□□□ 0.13
COPS3-201ENST00000268717 GLUD2P49448 558 aa15.83■□□□□ 0.13
COPS3-201ENST00000268717 ARPP19P56211 112 aa15.83■□□□□ 0.13
COPS3-201ENST00000268717 TJAP1Q5JTD0 557 aa15.83■□□□□ 0.13
COPS3-201ENST00000268717 CEP85LQ5SZL2 805 aa15.83■□□□□ 0.13
COPS3-201ENST00000268717 DDX53Q86TM3 631 aaKnown RBP15.83■□□□□ 0.13
COPS3-201ENST00000268717 CCDC25Q86WR0 208 aa15.83■□□□□ 0.13
COPS3-201ENST00000268717 TTC9BQ8N6N2 239 aa15.83■□□□□ 0.13
COPS3-201ENST00000268717 TFB1MQ8WVM0 346 aaKnown RBP15.83■□□□□ 0.13
COPS3-201ENST00000268717 CASP10Q92851 521 aa15.83■□□□□ 0.13
COPS3-201ENST00000268717 RNF34Q969K3 372 aa15.83■□□□□ 0.13
COPS3-201ENST00000268717 FBXO32Q969P5 355 aa15.83■□□□□ 0.13
COPS3-201ENST00000268717 SLC39A13Q96H72 371 aa15.83■□□□□ 0.13
COPS3-201ENST00000268717 ASB2Q96Q27 587 aa15.83■□□□□ 0.13
COPS3-201ENST00000268717 SEPT5Q99719 369 aaPredicted RBP15.83■□□□□ 0.13
COPS3-201ENST00000268717 ROPN1BQ9BZX4 212 aaPredicted RBP15.83■□□□□ 0.13
COPS3-201ENST00000268717 CRISPLD1Q9H336 500 aa15.83■□□□□ 0.13
COPS3-201ENST00000268717 ROPN1Q9HAT0 212 aaPredicted RBP15.83■□□□□ 0.13
COPS3-201ENST00000268717 TMBIM4Q9HC24 238 aa15.83■□□□□ 0.13
COPS3-201ENST00000268717 TLR9Q9NR96 1032 aa15.83■□□□□ 0.13
COPS3-201ENST00000268717 GMIPQ9P107 970 aa15.83■□□□□ 0.13
COPS3-201ENST00000268717 OR12D3Q9UGF7 316 aa15.83■□□□□ 0.13
COPS3-201ENST00000268717 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.83■□□□□ 0.12
COPS3-201ENST00000268717 KCNU1A8MYU2 1149 aa15.83■□□□□ 0.12
COPS3-201ENST00000268717 FAM72CH0Y354 149 aa15.83■□□□□ 0.12
COPS3-201ENST00000268717 MFSD11O43934 449 aa15.83■□□□□ 0.12
COPS3-201ENST00000268717 ABLIM3O94929 683 aa15.83■□□□□ 0.12
COPS3-201ENST00000268717 ERCC2P18074 760 aa15.83■□□□□ 0.12
COPS3-201ENST00000268717 USP46P62068 366 aa15.83■□□□□ 0.12
COPS3-201ENST00000268717 CREMQ03060 361 aa15.83■□□□□ 0.12
COPS3-201ENST00000268717 IFFO1Q0D2I5 559 aa15.83■□□□□ 0.12
COPS3-201ENST00000268717 IFRD2Q12894 506 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms