RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 ZNF683Q8IZ20 524 aa16.87■□□□□ 0.29
TPM1-201ENST00000267996 NPWQ8N729 165 aa16.87■□□□□ 0.29
TPM1-201ENST00000267996 KLHL23Q8NBE8 558 aa16.87■□□□□ 0.29
TPM1-201ENST00000267996 HTR3CQ8WXA8 447 aa16.87■□□□□ 0.29
TPM1-201ENST00000267996 ZBTB9Q96C00 473 aa16.87■□□□□ 0.29
TPM1-201ENST00000267996 KLC2Q9H0B6 622 aa16.87■□□□□ 0.29
TPM1-201ENST00000267996 BRD8Q9H0E9 1235 aa16.87■□□□□ 0.29
TPM1-201ENST00000267996 SIK2Q9H0K1 926 aa16.87■□□□□ 0.29
TPM1-201ENST00000267996 CDC42EP4Q9H3Q1 356 aaKnown RBP16.87■□□□□ 0.29
TPM1-201ENST00000267996 XPO7Q9UIA9 1087 aaKnown RBP16.87■□□□□ 0.29
TPM1-201ENST00000267996 MAGED2Q9UNF1 606 aaPredicted RBP16.87■□□□□ 0.29
TPM1-201ENST00000267996 HS3ST4Q9Y661 456 aa16.87■□□□□ 0.29
TPM1-201ENST00000267996 ZNF840PA6NDX5 716 aa16.86■□□□□ 0.29
TPM1-201ENST00000267996 FGF10O15520 208 aaPredicted RBP16.86■□□□□ 0.29
TPM1-201ENST00000267996 SERPINB6P35237 376 aa16.86■□□□□ 0.29
TPM1-201ENST00000267996 ACTN2P35609 894 aa16.86■□□□□ 0.29
TPM1-201ENST00000267996 KPNA1P52294 538 aaPredicted RBP16.86■□□□□ 0.29
TPM1-201ENST00000267996 EIF3BP55884 814 aaKnown RBP16.86■□□□□ 0.29
TPM1-201ENST00000267996 ZNF844Q08AG5 666 aa16.86■□□□□ 0.29
TPM1-201ENST00000267996 GALNT2Q10471 571 aa16.86■□□□□ 0.29
TPM1-201ENST00000267996 KCNJ11Q14654 390 aa16.86■□□□□ 0.29
TPM1-201ENST00000267996 PIK3R6Q5UE93 754 aa16.86■□□□□ 0.29
TPM1-201ENST00000267996 HEATR6Q6AI08 1181 aaKnown RBP16.86■□□□□ 0.29
TPM1-201ENST00000267996 KLHDC10Q6PID8 442 aa16.86■□□□□ 0.29
TPM1-201ENST00000267996 TP53INP2Q8IXH6 220 aa16.86■□□□□ 0.29
TPM1-201ENST00000267996 CCDC33Q8N5R6 958 aa16.86■□□□□ 0.29
TPM1-201ENST00000267996 LRRN4Q8WUT4 740 aa16.86■□□□□ 0.29
TPM1-201ENST00000267996 TBC1D31Q96DN5 1066 aa16.86■□□□□ 0.29
TPM1-201ENST00000267996 LGMNQ99538 433 aa16.86■□□□□ 0.29
TPM1-201ENST00000267996 CCSER2Q9H7U1 834 aa16.86■□□□□ 0.29
TPM1-201ENST00000267996 WASH4PA8MWX3 477 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 CHADO15335 359 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 APOEP02649 317 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 CNPP09543 421 aaKnown RBP16.85■□□□□ 0.29
TPM1-201ENST00000267996 MX2P20592 715 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 ELF1P32519 619 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 MTA1Q13330 715 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 SLC29A2Q14542 456 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 UBAP2Q5T6F2 1119 aaKnown RBP16.85■□□□□ 0.29
TPM1-201ENST00000267996 ACBD5Q5T8D3 534 aaPredicted RBP16.85■□□□□ 0.29
TPM1-201ENST00000267996 DENND2CQ68D51 928 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 C14orf80Q86SX3 495 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 TADA2BQ86TJ2 420 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 ATP6V0D2Q8N8Y2 350 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 CCDC110Q8TBZ0 833 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 P2RY11Q96G91 374 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 PKNOX2Q96KN3 472 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 RBM15Q96T37 977 aaKnown RBP eCLIP16.85■□□□□ 0.292e-7■■□□□ 13.8
TPM1-201ENST00000267996 LZTS1Q9Y250 596 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 HBS1LQ9Y450 684 aaKnown RBP16.85■□□□□ 0.29
TPM1-201ENST00000267996 INSL5Q9Y5Q6 135 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 A0A0A0MRY4 1105 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 TCRBV7S3A2A0A539 114 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 SLC12A8A0AV02 714 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 LCHNA4D1U4 455 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 GOLGA8KD6RF30 607 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 E9PAM4 449 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 PRRG1O14668 218 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 ALOX15BO15296 676 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 TMEM63AO94886 807 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 TTC4O95801 387 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 SRGAP2BP0DMP2 458 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 ATP2A2P16615 1042 aaKnown RBP16.85■□□□□ 0.29
TPM1-201ENST00000267996 BMPR1AP36894 532 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 TUBP50607 506 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 CBX1P83916 185 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 PPIDQ08752 370 aaKnown RBP16.85■□□□□ 0.29
TPM1-201ENST00000267996 VEPH1Q14D04 833 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 LZTR1Q8N653 840 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 NETO2Q8NC67 525 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 OR2W6PQ8NHA6 318 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 HDAC11Q96DB2 347 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 BTN2A3PQ96KV6 586 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 SPATA13Q96N96 652 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 TMEM109Q9BVC6 243 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 CATSPERBQ9H7T0 1116 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 RAB6BQ9NRW1 208 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 DNAJC17Q9NVM6 304 aaKnown RBP16.85■□□□□ 0.29
TPM1-201ENST00000267996 NINJ2Q9NZG7 142 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 SLC12A6Q9UHW9 1150 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 DNMT3LQ9UJW3 386 aa16.85■□□□□ 0.29
TPM1-201ENST00000267996 PLXNA4Q9HCM2 1894 aa16.84■□□□□ 0.29
TPM1-201ENST00000267996 IGLV3-10A0A075B6K4 115 aa16.84■□□□□ 0.29
TPM1-201ENST00000267996 E7ESA3 106 aa16.84■□□□□ 0.29
TPM1-201ENST00000267996 EIF3HO15372 352 aaKnown RBP eCLIP16.84■□□□□ 0.29
TPM1-201ENST00000267996 TLL1O43897 1013 aa16.84■□□□□ 0.29
TPM1-201ENST00000267996 RNF40O75150 1001 aa16.84■□□□□ 0.29
TPM1-201ENST00000267996 MOCS2O96007 188 aaPredicted RBP16.84■□□□□ 0.29
TPM1-201ENST00000267996 SYN1P17600 705 aa16.84■□□□□ 0.29
TPM1-201ENST00000267996 ATP5C1P36542 298 aaKnown RBP16.84■□□□□ 0.29
TPM1-201ENST00000267996 MAGEA4P43358 317 aa16.84■□□□□ 0.29
TPM1-201ENST00000267996 PPP3CCP48454 512 aa16.84■□□□□ 0.29
TPM1-201ENST00000267996 BASP1P80723 227 aaKnown RBP16.84■□□□□ 0.29
TPM1-201ENST00000267996 ZNF33AQ06730 810 aa16.84■□□□□ 0.29
TPM1-201ENST00000267996 WASHC5Q12768 1159 aa16.84■□□□□ 0.29
TPM1-201ENST00000267996 TWF1Q12792 350 aa16.84■□□□□ 0.29
TPM1-201ENST00000267996 MS4A13Q5J8X5 152 aa16.84■□□□□ 0.29
TPM1-201ENST00000267996 CEP85LQ5SZL2 805 aa16.84■□□□□ 0.29
TPM1-201ENST00000267996 HECTD3Q5T447 861 aa16.84■□□□□ 0.29
TPM1-201ENST00000267996 RWDD4Q6NW29 188 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms