RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 TIMM44O43615 452 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 FAM155BO75949 473 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 PTPRAP18433 802 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 GRIK1P39086 918 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 GP5P40197 560 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 USP46P62068 366 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 ZNF235Q14590 738 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 KCNT2Q6UVM3 1135 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 KBTBD2Q8IY47 623 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 GALNT15Q8N3T1 639 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.82□□□□□ -0.52
VPS33A-201ENST00000267199 TBCBQ99426 244 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 TRPC7Q9HCX4 862 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 GIMAP4Q9NUV9 329 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 PEX11AO75192 247 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 PIGNO95427 931 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 ERVK-10P10266 1014 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 DCAF4L1Q3SXM0 396 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 SGO1Q5FBB7 561 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 ANO7Q6IWH7 933 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 BBS12Q6ZW61 710 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 AMIGO2Q86SJ2 522 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 HPS6Q86YV9 775 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 FBXW8Q8N3Y1 598 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 DNAJC1Q96KC8 554 aaKnown RBP11.82□□□□□ -0.52
VPS33A-201ENST00000267199 WDR41Q9HAD4 459 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 TAS2R1Q9NYW7 299 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 WRAP73Q9P2S5 460 aaPredicted RBP11.82□□□□□ -0.52
VPS33A-201ENST00000267199 ZMYND8Q9ULU4 1186 aaPredicted RBP11.82□□□□□ -0.52
VPS33A-201ENST00000267199 STXBP5LQ9Y2K9 1186 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 BAIAP3O94812 1187 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 FKBP9O95302 570 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 APOA4P06727 396 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 FESP07332 822 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 NAGLUP54802 743 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 MMRN1Q13201 1228 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 SNAPC2Q13487 334 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 AASDHQ4L235 1098 aaPredicted RBP11.82□□□□□ -0.52
VPS33A-201ENST00000267199 FKBP9P1Q75LS8 142 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 TAS2R42Q7RTR8 314 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 DAW1Q8N136 415 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 REPS2Q8NFH8 660 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 SNX19Q92543 992 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 FAM162AQ96A26 154 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 P2RX7Q99572 595 aaKnown RBP11.82□□□□□ -0.52
VPS33A-201ENST00000267199 THUMPD3Q9BV44 507 aaKnown RBP11.82□□□□□ -0.52
VPS33A-201ENST00000267199 NDEL1Q9GZM8 345 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 DNAJC5Q9H3Z4 198 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 ASB7Q9H672 318 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 TMEM134Q9H6X4 195 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 NCKIPSDQ9NZQ3 722 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 FAM8A1Q9UBU6 413 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 NOCTQ9UK39 431 aaKnown RBP11.82□□□□□ -0.52
VPS33A-201ENST00000267199 RGPD5Q99666 1765 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 H3BRB1 525 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 CYB561D2O14569 222 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 PHGDHO43175 533 aaKnown RBP11.82□□□□□ -0.52
VPS33A-201ENST00000267199 TBX10O75333 385 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 ASS1P00966 412 aaKnown RBP11.82□□□□□ -0.52
VPS33A-201ENST00000267199 JCHAINP01591 159 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 CHRNB2P17787 502 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 CNTFP26441 200 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 PNPLA4P41247 253 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 TGFB2P61812 414 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 BFSP2Q13515 415 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 TNS4Q8IZW8 715 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.82□□□□□ -0.52
VPS33A-201ENST00000267199 LZICQ8WZA0 190 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 C17orf80Q9BSJ5 609 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 TMEM109Q9BVC6 243 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 TUT1Q9H6E5 874 aaKnown RBP11.82□□□□□ -0.52
VPS33A-201ENST00000267199 NDFIP2Q9NV92 336 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 DOLKQ9UPQ8 538 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 MRPL42Q9Y6G3 142 aaKnown RBP11.82□□□□□ -0.52
VPS33A-201ENST00000267199 TMEM191CA6NGB0 347 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 PSMD3O43242 534 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 ITGAVP06756 1048 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 ZNF286BP0CG31 522 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 UQCRBP14927 111 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 ATP6V1B2P21281 511 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 MMP8P22894 467 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 FSTL1Q12841 308 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 AMIGO3Q86WK7 504 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 DGCR14Q96DF8 476 aaKnown RBP11.81□□□□□ -0.52
VPS33A-201ENST00000267199 OSMRQ99650 979 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 TRIM62Q9BVG3 475 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 WDCPQ9H6R7 721 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 RNF19AQ9NV58 838 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 SNTG2Q9NY99 539 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 RIPK3Q9Y572 518 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 COX4I1P13073 169 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 PCSK1P29120 753 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 RTP1P59025 263 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 PEX6Q13608 980 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 NFYCQ13952 458 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 TAF5Q15542 800 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 SZRD1Q7Z422 152 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 SPATA2LQ8IUW3 424 aaPredicted RBP11.81□□□□□ -0.52
VPS33A-201ENST00000267199 UNC45BQ8IWX7 931 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 ZCCHC7Q8N3Z6 543 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms