RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 ITGA2BP08514 1039 aa17.27■□□□□ 0.36
SQLE-201ENST00000265896 GSTT1P30711 240 aa17.27■□□□□ 0.36
SQLE-201ENST00000265896 ABCD1P33897 745 aa17.27■□□□□ 0.36
SQLE-201ENST00000265896 COPAP53621 1224 aa17.27■□□□□ 0.36
SQLE-201ENST00000265896 SLC6A3Q01959 620 aa17.27■□□□□ 0.36
SQLE-201ENST00000265896 CCNIQ14094 377 aa17.27■□□□□ 0.36
SQLE-201ENST00000265896 BOLA3Q53S33 107 aa17.27■□□□□ 0.36
SQLE-201ENST00000265896 DALRD3Q5D0E6 543 aaKnown RBP17.27■□□□□ 0.36
SQLE-201ENST00000265896 LBX2Q6XYB7 198 aa17.27■□□□□ 0.36
SQLE-201ENST00000265896 MYLK4Q86YV6 388 aaPredicted RBP17.27■□□□□ 0.36
SQLE-201ENST00000265896 DNERQ8NFT8 737 aa17.27■□□□□ 0.36
SQLE-201ENST00000265896 PPP4R1Q8TF05 950 aa17.27■□□□□ 0.36
SQLE-201ENST00000265896 GDPD5Q8WTR4 605 aa17.27■□□□□ 0.36
SQLE-201ENST00000265896 NMD3Q96D46 503 aaKnown RBP17.27■□□□□ 0.36
SQLE-201ENST00000265896 HESX1Q9UBX0 185 aa17.27■□□□□ 0.36
SQLE-201ENST00000265896 PCDHA11Q9Y5I1 949 aa17.27■□□□□ 0.36
SQLE-201ENST00000265896 NELFEP18615 380 aaKnown RBP17.27■□□□□ 0.35
SQLE-201ENST00000265896 EPHA3P29320 983 aa17.27■□□□□ 0.35
SQLE-201ENST00000265896 SCN1AP35498 2009 aa17.27■□□□□ 0.35
SQLE-201ENST00000265896 RAP1GDS1P52306 607 aa17.27■□□□□ 0.35
SQLE-201ENST00000265896 TUBB3Q13509 450 aa17.27■□□□□ 0.35
SQLE-201ENST00000265896 SURF1Q15526 300 aa17.27■□□□□ 0.35
SQLE-201ENST00000265896 HSP90AA5PQ58FG0 334 aa17.27■□□□□ 0.35
SQLE-201ENST00000265896 CELF3Q5SZQ8 465 aaKnown RBP17.27■□□□□ 0.35
SQLE-201ENST00000265896 PID1Q7Z2X4 250 aa17.27■□□□□ 0.35
SQLE-201ENST00000265896 TFB1MQ8WVM0 346 aaKnown RBP17.27■□□□□ 0.35
SQLE-201ENST00000265896 HTR3CQ8WXA8 447 aa17.27■□□□□ 0.35
SQLE-201ENST00000265896 MFSD3Q96ES6 412 aa17.27■□□□□ 0.35
SQLE-201ENST00000265896 FCRL3Q96P31 734 aaPredicted RBP17.27■□□□□ 0.35
SQLE-201ENST00000265896 SORT1Q99523 831 aa17.27■□□□□ 0.35
SQLE-201ENST00000265896 MTMR10Q9NXD2 777 aa17.27■□□□□ 0.35
SQLE-201ENST00000265896 CLIC5Q9NZA1 410 aa17.27■□□□□ 0.35
SQLE-201ENST00000265896 MCM3APO60318 1980 aa17.26■□□□□ 0.35
SQLE-201ENST00000265896 CCDC160A6NGH7 325 aa17.26■□□□□ 0.35
SQLE-201ENST00000265896 PLIN3O60664 434 aa17.26■□□□□ 0.35
SQLE-201ENST00000265896 FESP07332 822 aa17.26■□□□□ 0.35
SQLE-201ENST00000265896 GABRB2P47870 512 aa17.26■□□□□ 0.35
SQLE-201ENST00000265896 ZNF280AP59817 542 aaPredicted RBP17.26■□□□□ 0.35
SQLE-201ENST00000265896 ZNF460Q14592 562 aa17.26■□□□□ 0.35
SQLE-201ENST00000265896 LBRQ14739 615 aaKnown RBP17.26■□□□□ 0.35
SQLE-201ENST00000265896 ZRSR2Q15696 482 aaKnown RBP17.26■□□□□ 0.35
SQLE-201ENST00000265896 NET1Q7Z628 596 aaPredicted RBP17.26■□□□□ 0.35
SQLE-201ENST00000265896 DNAAF3Q8N9W5 541 aa17.26■□□□□ 0.35
SQLE-201ENST00000265896 ZNF669Q96BR6 464 aaPredicted RBP17.26■□□□□ 0.35
SQLE-201ENST00000265896 SGF29Q96ES7 293 aa17.26■□□□□ 0.35
SQLE-201ENST00000265896 SH3GL3Q99963 347 aa17.26■□□□□ 0.35
SQLE-201ENST00000265896 INPP5FQ9Y2H2 1132 aa17.26■□□□□ 0.35
SQLE-201ENST00000265896 C19orf81C9J6K1 198 aa17.26■□□□□ 0.35
SQLE-201ENST00000265896 SOCS7O14512 581 aa17.26■□□□□ 0.35
SQLE-201ENST00000265896 CLGNO14967 610 aa17.26■□□□□ 0.35
SQLE-201ENST00000265896 MAGEC1O60732 1142 aa17.26■□□□□ 0.35
SQLE-201ENST00000265896 ATP6V1B1P15313 513 aa17.26■□□□□ 0.35
SQLE-201ENST00000265896 GRIA2P42262 883 aa17.26■□□□□ 0.35
SQLE-201ENST00000265896 BTKQ06187 659 aa17.26■□□□□ 0.35
SQLE-201ENST00000265896 TRMT5Q32P41 509 aaKnown RBP17.26■□□□□ 0.35
SQLE-201ENST00000265896 NCBP2-AS2Q69YL0 99 aa17.26■□□□□ 0.35
SQLE-201ENST00000265896 SLC9A4Q6AI14 798 aa17.26■□□□□ 0.35
SQLE-201ENST00000265896 NXNQ6DKJ4 435 aa17.26■□□□□ 0.35
SQLE-201ENST00000265896 LCLAT1Q6UWP7 414 aa17.26■□□□□ 0.35
SQLE-201ENST00000265896 SATL1Q86VE3 508 aa17.26■□□□□ 0.35
SQLE-201ENST00000265896 P2RY11Q96G91 374 aa17.26■□□□□ 0.35
SQLE-201ENST00000265896 EIF2AQ9BY44 585 aaKnown RBP17.26■□□□□ 0.35
SQLE-201ENST00000265896 S100A14Q9HCY8 104 aa17.26■□□□□ 0.35
SQLE-201ENST00000265896 TNFSF13BQ9Y275 285 aa17.26■□□□□ 0.35
SQLE-201ENST00000265896 hCG_2014768A0A024R1R8 64 aa17.25■□□□□ 0.35
SQLE-201ENST00000265896 ADM5C9JUS6 153 aa17.25■□□□□ 0.35
SQLE-201ENST00000265896 NDC80O14777 642 aa17.25■□□□□ 0.35
SQLE-201ENST00000265896 SPAG6O75602 509 aa17.25■□□□□ 0.35
SQLE-201ENST00000265896 PRKCGP05129 697 aa17.25■□□□□ 0.35
SQLE-201ENST00000265896 RALBP11234 206 aa17.25■□□□□ 0.35
SQLE-201ENST00000265896 CCNFP41002 786 aa17.25■□□□□ 0.35
SQLE-201ENST00000265896 TBL3Q12788 808 aaKnown RBP17.25■□□□□ 0.35
SQLE-201ENST00000265896 SLC2A14Q8TDB8 520 aa17.25■□□□□ 0.35
SQLE-201ENST00000265896 DNAJC1Q96KC8 554 aaKnown RBP17.25■□□□□ 0.35
SQLE-201ENST00000265896 C2orf40Q9H1Z8 148 aa17.25■□□□□ 0.35
SQLE-201ENST00000265896 COG4Q9H9E3 785 aa17.25■□□□□ 0.35
SQLE-201ENST00000265896 CITO14578 2027 aa17.25■□□□□ 0.35
SQLE-201ENST00000265896 KLF11O14901 512 aa17.25■□□□□ 0.35
SQLE-201ENST00000265896 CWF19L1Q69YN2 538 aaKnown RBP17.25■□□□□ 0.35
SQLE-201ENST00000265896 GALNT4Q8N4A0 578 aa17.25■□□□□ 0.35
SQLE-201ENST00000265896 DCLK2Q8N568 766 aa17.25■□□□□ 0.35
SQLE-201ENST00000265896 OR6Y1Q8NGX8 325 aa17.25■□□□□ 0.35
SQLE-201ENST00000265896 USP33Q8TEY7 942 aa17.25■□□□□ 0.35
SQLE-201ENST00000265896 FRMD8P1Q9BZ68 369 aaPredicted RBP17.25■□□□□ 0.35
SQLE-201ENST00000265896 CDHR5Q9HBB8 845 aa17.25■□□□□ 0.35
SQLE-201ENST00000265896 CDH22Q9UJ99 828 aa17.25■□□□□ 0.35
SQLE-201ENST00000265896 PPME1Q9Y570 386 aa17.25■□□□□ 0.35
SQLE-201ENST00000265896 BCLAF3A2AJT9 711 aaKnown RBP17.25■□□□□ 0.35
SQLE-201ENST00000265896 PHGDHO43175 533 aaKnown RBP17.25■□□□□ 0.35
SQLE-201ENST00000265896 HSPA4LO95757 839 aa17.25■□□□□ 0.35
SQLE-201ENST00000265896 MSLNQ13421 630 aaPredicted RBP17.25■□□□□ 0.35
SQLE-201ENST00000265896 CERCAMQ5T4B2 595 aa17.25■□□□□ 0.35
SQLE-201ENST00000265896 RPS27LQ71UM5 84 aaKnown RBP17.25■□□□□ 0.35
SQLE-201ENST00000265896 CHST13Q8NET6 341 aa17.25■□□□□ 0.35
SQLE-201ENST00000265896 ARNTL2Q8WYA1 636 aa17.25■□□□□ 0.35
SQLE-201ENST00000265896 MMADHCQ9H3L0 296 aaPredicted RBP17.25■□□□□ 0.35
SQLE-201ENST00000265896 PRDM12Q9H4Q4 367 aa17.25■□□□□ 0.35
SQLE-201ENST00000265896 POMPQ9Y244 141 aa17.25■□□□□ 0.35
SQLE-201ENST00000265896 FAM72CH0Y354 149 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 BUD23O43709 281 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms