RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 NAT14Q8WUY8 206 aa17.52■□□□□ 0.39
SRF-201ENST00000265354 NKD2Q969F2 451 aaPredicted RBP17.52■□□□□ 0.39
SRF-201ENST00000265354 FAM167AQ96KS9 214 aa17.52■□□□□ 0.39
SRF-201ENST00000265354 SPATA16Q9BXB7 569 aa17.52■□□□□ 0.39
SRF-201ENST00000265354 NMRAL1Q9HBL8 299 aa17.52■□□□□ 0.39
SRF-201ENST00000265354 ATXN10Q9UBB4 475 aa17.52■□□□□ 0.39
SRF-201ENST00000265354 CDH22Q9UJ99 828 aa17.52■□□□□ 0.39
SRF-201ENST00000265354 A0A087WZ62 844 aa17.52■□□□□ 0.39
SRF-201ENST00000265354 TMC7Q7Z402 723 aa17.52■□□□□ 0.39
SRF-201ENST00000265354 SIAH1Q8IUQ4 282 aa17.52■□□□□ 0.39
SRF-201ENST00000265354 PABPC5Q96DU9 382 aaKnown RBP17.52■□□□□ 0.39
SRF-201ENST00000265354 ABHD8Q96I13 439 aa17.52■□□□□ 0.39
SRF-201ENST00000265354 FDXACB1Q9BRP7 624 aaPredicted RBP17.52■□□□□ 0.39
SRF-201ENST00000265354 DEFB129Q9H1M3 183 aa17.52■□□□□ 0.39
SRF-201ENST00000265354 TRUB2O95900 331 aaKnown RBP17.51■□□□□ 0.39
SRF-201ENST00000265354 C4BPAP04003 597 aaKnown RBP17.51■□□□□ 0.39
SRF-201ENST00000265354 NCAM1P13591 858 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 HNRNPLP14866 589 aaKnown RBP eCLIP17.51■□□□□ 0.394e-7■■■■□ 21.9
SRF-201ENST00000265354 TWF2Q6IBS0 349 aaKnown RBP17.51■□□□□ 0.39
SRF-201ENST00000265354 BRSK2Q8IWQ3 736 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 SCN4BQ8IWT1 228 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 ZNF280CQ8ND82 737 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 DDHD1Q8NEL9 900 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 DGCR14Q96DF8 476 aaKnown RBP17.51■□□□□ 0.39
SRF-201ENST00000265354 RMND5BQ96G75 393 aaPredicted RBP17.51■□□□□ 0.39
SRF-201ENST00000265354 COQ7Q99807 217 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 ZNRF3Q9ULT6 936 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 GNEQ9Y223 722 aaKnown RBP17.51■□□□□ 0.39
SRF-201ENST00000265354 C9JVG2 144 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 NR5A2O00482 541 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 PAPSS1O43252 624 aaPredicted RBP17.51■□□□□ 0.39
SRF-201ENST00000265354 YWHAZP63104 245 aaKnown RBP17.51■□□□□ 0.39
SRF-201ENST00000265354 DLG2Q15700 870 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 TRIM16LQ309B1 348 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 PQLC1Q8N2U9 271 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 OTUD5Q96G74 571 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 EBNA1BP2Q99848 306 aaKnown RBP17.51■□□□□ 0.39
SRF-201ENST00000265354 FRMD8Q9BZ67 464 aaPredicted RBP17.51■□□□□ 0.39
SRF-201ENST00000265354 DPP3Q9NY33 737 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 PKD2L2Q9NZM6 624 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 POMPQ9Y244 141 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 SNX5Q9Y5X3 404 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 LMO7Q8WWI1 1683 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 MAP3K13O43283 966 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 VAPBO95292 243 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 ERBB2P04626 1255 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 ITGA2BP08514 1039 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 NFICP08651 508 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 VDRP11473 427 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 ACAT1P24752 427 aaKnown RBP17.51■□□□□ 0.39
SRF-201ENST00000265354 LRRC38Q5VT99 294 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 EEF1DP3Q658K8 133 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 BEST2Q8NFU1 509 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 TSPAN14Q8NG11 270 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 DCUN1D1Q96GG9 259 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 CIB1Q99828 191 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 SPC25Q9HBM1 224 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 DDIT4Q9NX09 232 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 VANGL2Q9ULK5 521 aa17.51■□□□□ 0.39
SRF-201ENST00000265354 ARIH1Q9Y4X5 557 aaPredicted RBP17.51■□□□□ 0.39
SRF-201ENST00000265354 SRP72O76094 671 aaKnown RBP17.5■□□□□ 0.39
SRF-201ENST00000265354 CCDC159P0C7I6 412 aa17.5■□□□□ 0.39
SRF-201ENST00000265354 CCR3P51677 355 aa17.5■□□□□ 0.39
SRF-201ENST00000265354 ACTR3P61158 418 aa17.5■□□□□ 0.39
SRF-201ENST00000265354 TSTA3Q13630 321 aaPredicted RBP17.5■□□□□ 0.39
SRF-201ENST00000265354 NBPF12Q5TAG4 269 aaPredicted RBP17.5■□□□□ 0.39
SRF-201ENST00000265354 IER5Q5VY09 327 aa17.5■□□□□ 0.39
SRF-201ENST00000265354 RTKN2Q8IZC4 609 aa17.5■□□□□ 0.39
SRF-201ENST00000265354 DDI1Q8WTU0 396 aa17.5■□□□□ 0.39
SRF-201ENST00000265354 ARHGEF38Q9NXL2 777 aa17.5■□□□□ 0.39
SRF-201ENST00000265354 RRN3Q9NYV6 651 aa17.5■□□□□ 0.39
SRF-201ENST00000265354 UBIAD1Q9Y5Z9 338 aa17.5■□□□□ 0.39
SRF-201ENST00000265354 ZNF839A8K0R7 811 aa17.5■□□□□ 0.39
SRF-201ENST00000265354 MAFGO15525 162 aa17.5■□□□□ 0.39
SRF-201ENST00000265354 MGEA5O60502 916 aa17.5■□□□□ 0.39
SRF-201ENST00000265354 DAB2P98082 770 aa17.5■□□□□ 0.39
SRF-201ENST00000265354 RALGDSQ12967 914 aa17.5■□□□□ 0.39
SRF-201ENST00000265354 PDK2Q15119 407 aa17.5■□□□□ 0.39
SRF-201ENST00000265354 TMTC4Q5T4D3 741 aa17.5■□□□□ 0.39
SRF-201ENST00000265354 MPP5Q8N3R9 675 aa17.5■□□□□ 0.39
SRF-201ENST00000265354 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.5■□□□□ 0.39
SRF-201ENST00000265354 LENG1Q96BZ8 264 aaPredicted RBP17.5■□□□□ 0.39
SRF-201ENST00000265354 TUBGCP3Q96CW5 907 aa17.5■□□□□ 0.39
SRF-201ENST00000265354 GJD4Q96KN9 370 aaPredicted RBP17.5■□□□□ 0.39
SRF-201ENST00000265354 SLC4A5Q9BY07 1137 aa17.5■□□□□ 0.39
SRF-201ENST00000265354 ACOT9Q9Y305 439 aa17.5■□□□□ 0.39
SRF-201ENST00000265354 ANGPTL3Q9Y5C1 460 aa17.5■□□□□ 0.39
SRF-201ENST00000265354 NCF1BA6NI72 391 aaPredicted RBP17.5■□□□□ 0.39
SRF-201ENST00000265354 NCF1CA8MVU1 366 aaPredicted RBP17.5■□□□□ 0.39
SRF-201ENST00000265354 LACTBL1A8MY62 500 aa17.5■□□□□ 0.39
SRF-201ENST00000265354 XPOTO43592 962 aaKnown RBP17.5■□□□□ 0.39
SRF-201ENST00000265354 TYROBPO43914 113 aa17.5■□□□□ 0.39
SRF-201ENST00000265354 ASS1P00966 412 aaKnown RBP17.5■□□□□ 0.39
SRF-201ENST00000265354 NCF1P14598 390 aaPredicted RBP17.5■□□□□ 0.39
SRF-201ENST00000265354 ATXN1P54253 815 aaKnown RBP17.5■□□□□ 0.39
SRF-201ENST00000265354 SFT2D3Q587I9 215 aa17.5■□□□□ 0.39
SRF-201ENST00000265354 TMEM198Q66K66 360 aa17.5■□□□□ 0.39
SRF-201ENST00000265354 MPZL3Q6UWV2 235 aa17.5■□□□□ 0.39
SRF-201ENST00000265354 FAM183BPQ6ZVS7 135 aa17.5■□□□□ 0.39
SRF-201ENST00000265354 PARP8Q8N3A8 854 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms