RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 NUMBLQ9Y6R0 609 aa10.61□□□□□ -0.71
LSG1-201ENST00000265245 PLXNB2O15031 1838 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 EEF2KO00418 725 aaKnown RBP10.6□□□□□ -0.71
LSG1-201ENST00000265245 CLDN5O00501 218 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 FCHO1O14526 889 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 ZNF189O75820 626 aaPredicted RBP10.6□□□□□ -0.71
LSG1-201ENST00000265245 ALDH1A2O94788 518 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 FAM200BP0CF97 657 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 PGAM1P18669 254 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 GLUD2P49448 558 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 CPT1AP50416 773 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 CRYBB1P53674 252 aaPredicted RBP10.6□□□□□ -0.71
LSG1-201ENST00000265245 IFRD2Q12894 506 aaPredicted RBP10.6□□□□□ -0.71
LSG1-201ENST00000265245 KYAT3Q6YP21 454 aaKnown RBP10.6□□□□□ -0.71
LSG1-201ENST00000265245 MARK2Q7KZI7 788 aaKnown RBP10.6□□□□□ -0.71
LSG1-201ENST00000265245 ACMSDQ8TDX5 336 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 KCTD13Q8WZ19 329 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 WNT8BQ93098 351 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 NPY6RQ99463 290 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 PRDM12Q9H4Q4 367 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 HMX2A2RU54 273 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 GLTPD2A6NH11 291 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 BPGMP07738 259 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 CRADDP78560 199 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 NAB1Q13506 487 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 WSCD1Q658N2 575 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 TLDC1Q6P9B6 456 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 NT5C3BQ969T7 300 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 PGBD4Q96DM1 585 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 PTCD3Q96EY7 689 aaKnown RBP10.6□□□□□ -0.71
LSG1-201ENST00000265245 E7ENQ6 273 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 PEX11AO75192 247 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 LMNAP02545 664 aaKnown RBP10.6□□□□□ -0.71
LSG1-201ENST00000265245 MYL3P08590 195 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 MGAT1P26572 445 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 PSMB4P28070 264 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 TKTL1P51854 596 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 PITX1P78337 314 aaPredicted RBP10.6□□□□□ -0.71
LSG1-201ENST00000265245 ADAM17P78536 824 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 OCRLQ01968 901 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 IRF5Q13568 498 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 MDH1BQ5I0G3 518 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 RFX8Q6ZV50 586 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 SMC1BQ8NDV3 1235 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 LENG1Q96BZ8 264 aaPredicted RBP10.6□□□□□ -0.71
LSG1-201ENST00000265245 MIPEPQ99797 713 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 CEP41Q9BYV8 373 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 AP5M1Q9H0R1 490 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 KRT82Q9NSB4 513 aa10.6□□□□□ -0.71
LSG1-201ENST00000265245 C2orf71A6NGG8 1288 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 FBXO21O94952 628 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 GNAT1P11488 350 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 LRPAP1P30533 357 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 NDUFV1P49821 464 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 PDE1BQ01064 536 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 STX3Q13277 289 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 HIC1Q14526 733 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 CRYMQ14894 314 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 DBN1Q16643 649 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 C1QTNF12Q5T7M4 302 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 OLFML2BQ68BL8 750 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 CLEC20AQ6ZU45 233 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 PID1Q7Z2X4 250 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.59□□□□□ -0.71
LSG1-201ENST00000265245 ARRDC4Q8NCT1 418 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 SMG8Q8ND04 991 aaKnown RBP10.59□□□□□ -0.71
LSG1-201ENST00000265245 SLC7A14Q8TBB6 771 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 MICAL1Q8TDZ2 1067 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 KATNAL1Q9BW62 490 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 CADM1Q9BY67 442 aaKnown RBP10.59□□□□□ -0.71
LSG1-201ENST00000265245 NMUR2Q9GZQ4 415 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 DENND2DQ9H6A0 471 aaPredicted RBP10.59□□□□□ -0.71
LSG1-201ENST00000265245 PIH1D1Q9NWS0 290 aaKnown RBP10.59□□□□□ -0.71
LSG1-201ENST00000265245 ZFATQ9P243 1243 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 KLHL8Q9P2G9 620 aaPredicted RBP10.59□□□□□ -0.71
LSG1-201ENST00000265245 C17orf102A2RUQ5 167 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 GLRA3O75311 464 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 BEST1O76090 585 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 POLBP06746 335 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 FAM163BP0C2L3 166 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 MAP3K7CLP57077 242 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 IRX4P78413 519 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 PAFAH1B3Q15102 231 aaKnown RBP10.59□□□□□ -0.71
LSG1-201ENST00000265245 OTUD1Q5VV17 481 aaPredicted RBP10.59□□□□□ -0.71
LSG1-201ENST00000265245 SYPL2Q5VXT5 272 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 PACS1Q6VY07 963 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 TTC7BQ86TV6 843 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 UNC5BQ8IZJ1 945 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 ARHGAP24Q8N264 748 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 NETO2Q8NC67 525 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 SH3TC2Q8TF17 1288 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 ZNF483Q8TF39 744 aaPredicted RBP10.59□□□□□ -0.71
LSG1-201ENST00000265245 ANKRD27Q96NW4 1050 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 SLC2A13Q96QE2 648 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 SLC9A7Q96T83 725 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 TMPRSS4Q9NRS4 437 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 PIGVQ9NUD9 493 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 THAP1Q9NVV9 213 aa10.59□□□□□ -0.71
LSG1-201ENST00000265245 PPARGC1AQ9UBK2 798 aaKnown RBP10.59□□□□□ -0.71
LSG1-201ENST00000265245 MARCOQ9UEW3 520 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms