RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 ELMO3Q96BJ8 720 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 MMP19Q99542 508 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 HIPK3Q9H422 1215 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 C10orf88Q9H8K7 445 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 COL20A1Q9P218 1284 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 ARHGAP28Q9P2N2 729 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 CDH7Q9ULB5 785 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 IVNS1ABPQ9Y6Y0 642 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 TCRBV5S1A1TA0A578 114 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 ARHGEF37A1IGU5 675 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 ZNF701M0R085 212 aaPredicted RBP13.47□□□□□ -0.25
NUP54-201ENST00000264883 MCF2LO15068 1137 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 UGT1A9O60656 530 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 BMP10O95393 424 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 KRT7P08729 469 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 CYP2C9P11712 490 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 TCF4P15884 667 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 UGT1A6P19224 532 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 UGT1A1P22309 533 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 UGT1A4P22310 534 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 RPL22P35268 128 aaKnown RBP13.47□□□□□ -0.25
NUP54-201ENST00000264883 UGT1A3P35503 534 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 UGT1A5P35504 534 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 LIG4P49917 911 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 AP3M2P53677 418 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 GDF10P55107 478 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 RPS3AP61247 264 aaKnown RBP13.47□□□□□ -0.25
NUP54-201ENST00000264883 TXNL4AP83876 142 aaKnown RBP13.47□□□□□ -0.25
NUP54-201ENST00000264883 LGSNQ5TDP6 509 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 EGFLAMQ63HQ2 1017 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 PLA2G4FQ68DD2 849 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 DCUN1D2Q6PH85 259 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 THNSL1Q8IYQ7 743 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 TMEM35BQ8NCS4 154 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 IL31RAQ8NI17 732 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 KBTBD7Q8WVZ9 684 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 CLEC4DQ8WXI8 215 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 RMND5BQ96G75 393 aaPredicted RBP13.47□□□□□ -0.25
NUP54-201ENST00000264883 SERPINI1Q99574 410 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 FRMD8Q9BZ67 464 aaPredicted RBP13.47□□□□□ -0.25
NUP54-201ENST00000264883 GBA3Q9H227 469 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 UGT1A7Q9HAW7 530 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 UGT1A10Q9HAW8 530 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 UGT1A8Q9HAW9 530 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 BCAP29Q9UHQ4 241 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 GNPTGQ9UJJ9 305 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 PCDHA10Q9Y5I2 948 aa13.47□□□□□ -0.25
NUP54-201ENST00000264883 RFPL1O75677 317 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 IDH3AP50213 366 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 ZNF132P52740 706 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 CD300CQ08708 224 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 KRT80Q6KB66 452 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 TBC1D15Q8TC07 691 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 RSAD2Q8WXG1 361 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 BSNDQ8WZ55 320 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 CEP170P1Q96L14 293 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 RTKNQ9BST9 563 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 KIFC3Q9BVG8 833 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 GLIS2Q9BZE0 524 aaPredicted RBP13.46□□□□□ -0.25
NUP54-201ENST00000264883 IMPG2Q9BZV3 1241 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 CCDC68Q9H2F9 335 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 CNOT11Q9UKZ1 510 aaKnown RBP13.46□□□□□ -0.25
NUP54-201ENST00000264883 ARID2Q68CP9 1835 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.46□□□□□ -0.25
NUP54-201ENST00000264883 SULT1C4O75897 302 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 PIGRP01833 764 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 CAPNS1P04632 268 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 C8BP07358 591 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 MYL4P12829 197 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 CCDC130P13994 396 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 EIF2AK2P19525 551 aaKnown RBP13.46□□□□□ -0.25
NUP54-201ENST00000264883 NRF1Q16656 503 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 ZBED5Q49AG3 693 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 NBPF12Q5TAG4 269 aaPredicted RBP13.46□□□□□ -0.25
NUP54-201ENST00000264883 XKR5Q6UX68 686 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 BBS12Q6ZW61 710 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 APOBEC3FQ8IUX4 373 aaKnown RBP13.46□□□□□ -0.25
NUP54-201ENST00000264883 CPNE9Q8IYJ1 553 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 PHTF2Q8N3S3 785 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 HM13Q8TCT9 377 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 CGRRF1Q99675 332 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 MAN1C1Q9NR34 630 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 PNPLA3Q9NST1 481 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 GID8Q9NWU2 228 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 MKS1Q9NXB0 559 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 PRPF19Q9UMS4 504 aaKnown RBP13.46□□□□□ -0.25
NUP54-201ENST00000264883 AGTPBP1Q9UPW5 1226 aa13.46□□□□□ -0.25
NUP54-201ENST00000264883 TMX2-CTNND1H3BSU7 103 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 CLASP2O75122 1294 aaKnown RBP13.45□□□□□ -0.26
NUP54-201ENST00000264883 VNN1O95497 513 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 INHBBP09529 407 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 EPHA3P29320 983 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 SLC1A6P48664 564 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 KPNA1P52294 538 aaPredicted RBP13.45□□□□□ -0.26
NUP54-201ENST00000264883 CDH15P55291 814 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 CTBSQ01459 385 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 PGM5Q15124 567 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 HADHQ16836 314 aaKnown RBP13.45□□□□□ -0.26
NUP54-201ENST00000264883 RGS21Q2M5E4 152 aa13.45□□□□□ -0.26
NUP54-201ENST00000264883 MAVSQ7Z434 540 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms