RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 SKA1Q96BD8 255 aa12.72□□□□□ -0.37
TRAF4-202ENST00000262396 IRX2Q9BZI1 471 aaPredicted RBP12.72□□□□□ -0.37
TRAF4-202ENST00000262396 PCED1AQ9H1Q7 454 aa12.72□□□□□ -0.37
TRAF4-202ENST00000262396 UBE2TQ9NPD8 197 aaPredicted RBP12.72□□□□□ -0.37
TRAF4-202ENST00000262396 TM7SF3Q9NS93 570 aa12.72□□□□□ -0.37
TRAF4-202ENST00000262396 KLK13Q9UKR3 277 aa12.72□□□□□ -0.37
TRAF4-202ENST00000262396 MSRB2Q9Y3D2 182 aa12.72□□□□□ -0.37
TRAF4-202ENST00000262396 A0A1B0GVT2 93 aa12.71□□□□□ -0.37
TRAF4-202ENST00000262396 ASLP04424 464 aa12.71□□□□□ -0.37
TRAF4-202ENST00000262396 CD70P32970 193 aa12.71□□□□□ -0.37
TRAF4-202ENST00000262396 CSNK1EP49674 416 aaKnown RBP12.71□□□□□ -0.37
TRAF4-202ENST00000262396 MCCD1P59942 119 aaPredicted RBP12.71□□□□□ -0.37
TRAF4-202ENST00000262396 RING1Q06587 406 aa12.71□□□□□ -0.37
TRAF4-202ENST00000262396 CAMK2GQ13555 558 aaPredicted RBP12.71□□□□□ -0.37
TRAF4-202ENST00000262396 ENPP2Q13822 863 aa12.71□□□□□ -0.37
TRAF4-202ENST00000262396 MPP7Q5T2T1 576 aa12.71□□□□□ -0.37
TRAF4-202ENST00000262396 PIK3R6Q5UE93 754 aa12.71□□□□□ -0.37
TRAF4-202ENST00000262396 TMEM215Q68D42 235 aa12.71□□□□□ -0.37
TRAF4-202ENST00000262396 MSANTD2Q6P1R3 559 aa12.71□□□□□ -0.37
TRAF4-202ENST00000262396 BHLHA9Q7RTU4 235 aa12.71□□□□□ -0.37
TRAF4-202ENST00000262396 CHSY1Q86X52 802 aa12.71□□□□□ -0.37
TRAF4-202ENST00000262396 SCUBE3Q8IX30 993 aa12.71□□□□□ -0.37
TRAF4-202ENST00000262396 ADAM32Q8TC27 787 aa12.71□□□□□ -0.37
TRAF4-202ENST00000262396 RHBDD1Q8TEB9 315 aa12.71□□□□□ -0.37
TRAF4-202ENST00000262396 CLEC4CQ8WTT0 213 aa12.71□□□□□ -0.37
TRAF4-202ENST00000262396 KAT5Q92993 513 aa12.71□□□□□ -0.37
TRAF4-202ENST00000262396 P2RY11Q96G91 374 aa12.71□□□□□ -0.37
TRAF4-202ENST00000262396 MED15Q96RN5 788 aa12.71□□□□□ -0.37
TRAF4-202ENST00000262396 OMDQ99983 421 aa12.71□□□□□ -0.37
TRAF4-202ENST00000262396 SRRTQ9BXP5 876 aaKnown RBP12.71□□□□□ -0.37
TRAF4-202ENST00000262396 INTS2Q9H0H0 1204 aaKnown RBP12.71□□□□□ -0.37
TRAF4-202ENST00000262396 SGK2Q9HBY8 427 aa12.71□□□□□ -0.37
TRAF4-202ENST00000262396 STOML2Q9UJZ1 356 aa12.71□□□□□ -0.37
TRAF4-202ENST00000262396 MAP1BP46821 2468 aaKnown RBP12.71□□□□□ -0.37
TRAF4-202ENST00000262396 SYNJ2BP-COX16A0A087WUM0 186 aa12.7□□□□□ -0.38
TRAF4-202ENST00000262396 PMM2O15305 246 aa12.7□□□□□ -0.38
TRAF4-202ENST00000262396 RNASEH2AO75792 299 aaKnown RBP12.7□□□□□ -0.38
TRAF4-202ENST00000262396 CALCAP01258 141 aa12.7□□□□□ -0.38
TRAF4-202ENST00000262396 FTH1P19P0C7X4 201 aa12.7□□□□□ -0.38
TRAF4-202ENST00000262396 GNA15P30679 374 aa12.7□□□□□ -0.38
TRAF4-202ENST00000262396 ACSL1P33121 698 aa12.7□□□□□ -0.38
TRAF4-202ENST00000262396 RPS14P62263 151 aaKnown RBP12.7□□□□□ -0.38
TRAF4-202ENST00000262396 FAM193AP78312 1265 aa12.7□□□□□ -0.38
TRAF4-202ENST00000262396 GCNT1Q02742 428 aa12.7□□□□□ -0.38
TRAF4-202ENST00000262396 HLA-BQ31612 363 aa12.7□□□□□ -0.38
TRAF4-202ENST00000262396 INAVAQ3KP66 663 aa12.7□□□□□ -0.38
TRAF4-202ENST00000262396 ADIPOR2Q86V24 386 aa12.7□□□□□ -0.38
TRAF4-202ENST00000262396 ARHGEF19Q8IW93 802 aa12.7□□□□□ -0.38
TRAF4-202ENST00000262396 DHX40Q8IX18 779 aaKnown RBP12.7□□□□□ -0.38
TRAF4-202ENST00000262396 LGI2Q8N0V4 545 aa12.7□□□□□ -0.38
TRAF4-202ENST00000262396 CFAP52Q8N1V2 620 aa12.7□□□□□ -0.38
TRAF4-202ENST00000262396 PNPLA1Q8N8W4 532 aa12.7□□□□□ -0.38
TRAF4-202ENST00000262396 ATP6V0D2Q8N8Y2 350 aa12.7□□□□□ -0.38
TRAF4-202ENST00000262396 KDF1Q8NAX2 398 aaPredicted RBP12.7□□□□□ -0.38
TRAF4-202ENST00000262396 SPATA20Q8TB22 786 aa12.7□□□□□ -0.38
TRAF4-202ENST00000262396 DQX1Q8TE96 717 aaKnown RBP12.7□□□□□ -0.38
TRAF4-202ENST00000262396 FAM81BQ96LP2 452 aa12.7□□□□□ -0.38
TRAF4-202ENST00000262396 CDC6Q99741 560 aa12.7□□□□□ -0.38
TRAF4-202ENST00000262396 PDCL3Q9H2J4 239 aa12.7□□□□□ -0.38
TRAF4-202ENST00000262396 TMEM245Q9H330 911 aa12.7□□□□□ -0.38
TRAF4-202ENST00000262396 C6orf106Q9H6K1 298 aaPredicted RBP12.7□□□□□ -0.38
TRAF4-202ENST00000262396 SYNCQ9H7C4 482 aa12.7□□□□□ -0.38
TRAF4-202ENST00000262396 FAM204AQ9H8W3 233 aa12.7□□□□□ -0.38
TRAF4-202ENST00000262396 PRSS16Q9NQE7 514 aa12.7□□□□□ -0.38
TRAF4-202ENST00000262396 FBXL12Q9NXK8 326 aa12.7□□□□□ -0.38
TRAF4-202ENST00000262396 COX16Q9P0S2 106 aa12.7□□□□□ -0.38
TRAF4-202ENST00000262396 KIAA1522Q9P206 1035 aaPredicted RBP12.7□□□□□ -0.38
TRAF4-202ENST00000262396 NAALADL1Q9UQQ1 740 aa12.7□□□□□ -0.38
TRAF4-202ENST00000262396 TLR6Q9Y2C9 796 aa12.7□□□□□ -0.38
TRAF4-202ENST00000262396 LRRC72A6NJI9 287 aa12.69□□□□□ -0.38
TRAF4-202ENST00000262396 F5H5T6 163 aa12.69□□□□□ -0.38
TRAF4-202ENST00000262396 RNF225M0QZC1 329 aaPredicted RBP12.69□□□□□ -0.38
TRAF4-202ENST00000262396 FLRT2O43155 660 aa12.69□□□□□ -0.38
TRAF4-202ENST00000262396 IGLV3-19P01714 112 aa12.69□□□□□ -0.38
TRAF4-202ENST00000262396 CD44P16070 742 aaKnown RBP12.69□□□□□ -0.38
TRAF4-202ENST00000262396 ABCB4P21439 1286 aa12.69□□□□□ -0.38
TRAF4-202ENST00000262396 CSKP41240 450 aa12.69□□□□□ -0.38
TRAF4-202ENST00000262396 SGSHP51688 502 aa12.69□□□□□ -0.38
TRAF4-202ENST00000262396 SNX16P57768 344 aa12.69□□□□□ -0.38
TRAF4-202ENST00000262396 RPS24P62847 133 aaKnown RBP12.69□□□□□ -0.38
TRAF4-202ENST00000262396 CDK17Q00537 523 aa12.69□□□□□ -0.38
TRAF4-202ENST00000262396 ARHGAP44Q17R89 818 aa12.69□□□□□ -0.38
TRAF4-202ENST00000262396 PKDCCQ504Y2 493 aa12.69□□□□□ -0.38
TRAF4-202ENST00000262396 TTI2Q6NXR4 508 aa12.69□□□□□ -0.38
TRAF4-202ENST00000262396 ENOSF1Q7L5Y1 443 aa12.69□□□□□ -0.38
TRAF4-202ENST00000262396 ELOA2Q8IYF1 753 aaPredicted RBP12.69□□□□□ -0.38
TRAF4-202ENST00000262396 UBR7Q8N806 425 aa12.69□□□□□ -0.38
TRAF4-202ENST00000262396 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.69□□□□□ -0.382e-10■□□□□ 9.7
TRAF4-202ENST00000262396 FIBINQ8TAL6 211 aa12.69□□□□□ -0.38
TRAF4-202ENST00000262396 AZIN2Q96A70 460 aa12.69□□□□□ -0.38
TRAF4-202ENST00000262396 NOX5Q96PH1 765 aa12.69□□□□□ -0.38
TRAF4-202ENST00000262396 PPP1R9BQ96SB3 815 aa12.69□□□□□ -0.38
TRAF4-202ENST00000262396 ACE2Q9BYF1 805 aaPredicted RBP12.69□□□□□ -0.38
TRAF4-202ENST00000262396 AASDHPPTQ9NRN7 309 aa12.69□□□□□ -0.38
TRAF4-202ENST00000262396 SCML1Q9UN30 329 aa12.69□□□□□ -0.38
TRAF4-202ENST00000262396 PLXND1Q9Y4D7 1925 aa12.68□□□□□ -0.38
TRAF4-202ENST00000262396 SLC2A3P11169 496 aa12.68□□□□□ -0.38
TRAF4-202ENST00000262396 CD27P26842 260 aa12.68□□□□□ -0.38
TRAF4-202ENST00000262396 SLC6A4P31645 630 aa12.68□□□□□ -0.38
TRAF4-202ENST00000262396 NNTQ13423 1086 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms