RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 ZNF410Q86VK4 478 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 FNDC8Q8TC99 324 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 SLC7A3Q8WY07 619 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 C8orf37Q96NL8 207 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 SLC39A3Q9BRY0 314 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 CYP26B1Q9NR63 512 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 ASNSD1Q9NWL6 643 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 EGFL7Q9UHF1 273 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 TELO2Q9Y4R8 837 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 AP4S1Q9Y587 144 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 ATP8B3O60423 1300 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 A8MU76 341 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 APOC4-APOC2K7ER74 178 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 PPEF1O14829 653 aaPredicted RBP16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 RFPL1O75677 317 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 PIGNO95427 931 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 APOC2P02655 101 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 TPH1P17752 444 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 UGT1A6P19224 532 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 GJA8P48165 433 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 ZNF252P-AS1Q0IIN9 211 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 TEDDM1Q5T9Z0 273 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 ANGEL2Q5VTE6 544 aaKnown RBP16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 TMEM214Q6NUQ4 689 aaKnown RBP16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 SAPCD2Q86UD0 394 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 SOX17Q9H6I2 414 aaPredicted RBP16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 RPS6KA4O75676 772 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 SMIM18P0DKX4 95 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 CDH3P22223 829 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 DLGAP5Q15398 846 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 C1QTNF12Q5T7M4 302 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 TMEM53Q6P2H8 277 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 GK5Q6ZS86 529 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 PID1Q7Z2X4 250 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 KIAA2013Q8IYS2 634 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 ZNF276Q8N554 614 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 RXFP2Q8WXD0 754 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 BTBD9Q96Q07 612 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 GPATCH1Q9BRR8 931 aaKnown RBP16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 CCDC28BQ9BUN5 200 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 ZNF341Q9BYN7 854 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 ILKAPQ9H0C8 392 aaPredicted RBP16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 RSAD1Q9HA92 442 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 PSAT1Q9Y617 370 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 SF3B1O75533 1304 aaKnown RBP eCLIP16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 MAN1A2O60476 641 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 HALP42357 657 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 ADGRE1Q14246 886 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 AGKQ53H12 422 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 APOBEC3HQ6NTF7 200 aaKnown RBP16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 TMC2Q8TDI7 906 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 ACTRT2Q8TDY3 377 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 ZMAT2Q96NC0 199 aaKnown RBP16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 SNX25Q9H3E2 840 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 DYTNA2CJ06 578 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 NDUFB5O43674 189 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 EXTL3O43909 919 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 PARNO95453 639 aaKnown RBP16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 TNNC2P02585 160 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 HMOX2P30519 316 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 GRIA3P42263 894 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 EN1Q05925 392 aaPredicted RBP16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 ZACNQ401N2 412 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 SEL1L3Q68CR1 1132 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 KYAT3Q6YP21 454 aaKnown RBP16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 MAP4K3Q8IVH8 894 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 ADGRF2Q8IZF7 708 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 HPS1Q92902 700 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 ATP6V0A1Q93050 837 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 RIT2Q99578 217 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 EFCAB1Q9HAE3 211 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 GID8Q9NWU2 228 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 C6orf203Q9P0P8 240 aaPredicted RBP16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 MICAL3Q7RTP6 2002 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 SPAG6O75602 509 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 UGT1A1P22309 533 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 UGT1A4P22310 534 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 UGT1A3P35503 534 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 UGT1A5P35504 534 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 CPOXP36551 454 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 ACTR2P61160 394 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 MS4A2Q01362 244 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 SLC39A4Q6P5W5 647 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 PRR23BQ6ZRT6 265 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 TMEM26Q6ZUK4 368 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 STRA8Q7Z7C7 330 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 SIX6OS1Q8N1H7 587 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 BPIFB6Q8NFQ5 453 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 GFM2Q969S9 779 aaKnown RBP16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 OSBPL6Q9BZF3 934 aa16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 FARP1Q9Y4F1 1045 aaPredicted RBP16.31■□□□□ 0.2
PRPF40B-201ENST00000261897 K7EPI3 171 aa16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 KCNK1O00180 336 aa16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 AP3B1O00203 1094 aa16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 FBP2O00757 339 aa16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 SLC18A2Q05940 514 aa16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 SPIDRQ14159 915 aa16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 NFIL3Q16649 462 aa16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 PACS1Q6VY07 963 aa16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 SNX29P2Q8IUI4 249 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms