RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 MED30Q96HR3 178 aa10.9□□□□□ -0.67
KPNA3-201ENST00000261667 BDH2Q9BUT1 245 aa10.9□□□□□ -0.67
KPNA3-201ENST00000261667 STN1Q9H668 368 aaKnown RBP10.9□□□□□ -0.67
KPNA3-201ENST00000261667 WDR41Q9HAD4 459 aa10.9□□□□□ -0.67
KPNA3-201ENST00000261667 RAPGEFL1Q9UHV5 662 aa10.9□□□□□ -0.67
KPNA3-201ENST00000261667 NIP7Q9Y221 180 aaKnown RBP eCLIP10.9□□□□□ -0.67
KPNA3-201ENST00000261667 SLIT2O94813 1529 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 PRAMEF22A3QJZ6 481 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 APOL3O95236 402 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 ILF2Q12905 390 aaKnown RBP10.89□□□□□ -0.67
KPNA3-201ENST00000261667 C6orf10Q5SRN2 563 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 DUPD1Q68J44 220 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 MZT2BQ6NZ67 158 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 TMEM26Q6ZUK4 368 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 HACE1Q8IYU2 909 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 AGAP3Q96P47 875 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 RSPH9Q9H1X1 276 aaPredicted RBP10.89□□□□□ -0.67
KPNA3-201ENST00000261667 FANCFQ9NPI8 374 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 PI4KBQ9UBF8 816 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 C2orf71A6NGG8 1288 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 OR6C70A6NIJ9 312 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 FOXO6A8MYZ6 492 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 USP17L12C9JPN9 530 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 KLRF2D3W0D1 207 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 USP17L21D6R901 530 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 MEIS1O00470 390 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 PLD2O14939 933 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 AURKAO14965 403 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 KMOO15229 486 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 SNAP91O60641 907 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 FAM20BO75063 409 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 ABCE1P61221 599 aaKnown RBP10.89□□□□□ -0.67
KPNA3-201ENST00000261667 IL18R1Q13478 541 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 GTF2H3Q13889 308 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 SFT2D3Q587I9 215 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 TAGAPQ8N103 731 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 SCFD2Q8WU76 684 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 SRPK1Q96SB4 655 aaKnown RBP10.89□□□□□ -0.67
KPNA3-201ENST00000261667 OR2B2Q9GZK3 357 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 INTS2Q9H0H0 1204 aaKnown RBP10.89□□□□□ -0.67
KPNA3-201ENST00000261667 H0Y858 1186 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 APRTP07741 180 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 CREB1P16220 341 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 MSH3P20585 1137 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 SMUG1Q53HV7 270 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 AGAP9Q5VTM2 703 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 KCTD8Q6ZWB6 473 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 TICAM1Q8IUC6 712 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 SDR16C5Q8N3Y7 309 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 RAB2BQ8WUD1 216 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 C19orf60Q96EN9 201 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 TP63Q9H3D4 680 aaPredicted RBP10.89□□□□□ -0.67
KPNA3-201ENST00000261667 DYRK4Q9NR20 520 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 SLC7A8Q9UHI5 535 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 TMCC3Q9ULS5 477 aa10.89□□□□□ -0.67
KPNA3-201ENST00000261667 ZMYM2Q9UBW7 1377 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 XDHP47989 1333 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 MAP3K15Q6ZN16 1313 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 F5H423 210 aaPredicted RBP10.88□□□□□ -0.67
KPNA3-201ENST00000261667 RALBP11234 206 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 PSMA2P25787 234 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 NR4A2P43354 598 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 NPEPPSP55786 919 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 RAB25P57735 213 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 IFRD2Q12894 506 aaPredicted RBP10.88□□□□□ -0.67
KPNA3-201ENST00000261667 PLCL1Q15111 1095 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 BHLHB9Q6PI77 547 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 PDSS2Q86YH6 399 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 APOPT1Q96IL0 206 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 MAELQ96JY0 434 aaKnown RBP10.88□□□□□ -0.67
KPNA3-201ENST00000261667 ADPRHL2Q9NX46 363 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 ANKRD34BA5PLL1 514 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 F8A1P23610 371 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 VARSP26640 1264 aaKnown RBP10.88□□□□□ -0.67
KPNA3-201ENST00000261667 HTR2BP41595 481 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 GCLMP48507 274 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 INHBEP58166 350 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 FUT11Q495W5 492 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 BRDTQ58F21 947 aaPredicted RBP10.88□□□□□ -0.67
KPNA3-201ENST00000261667 MTX3Q5HYI7 312 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 NT5DC1Q5TFE4 455 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 MFSD5Q6N075 450 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 RNF135Q8IUD6 432 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 TBC1D21Q8IYX1 336 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 PCDH20Q8N6Y1 951 aaKnown RBP10.88□□□□□ -0.67
KPNA3-201ENST00000261667 SHCBP1Q8NEM2 672 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 PPP1R16BQ96T49 567 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 TTYH1Q9H313 450 aaPredicted RBP10.88□□□□□ -0.67
KPNA3-201ENST00000261667 RAB6BQ9NRW1 208 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 MKS1Q9NXB0 559 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 UBA2Q9UBT2 640 aaPredicted RBP10.88□□□□□ -0.67
KPNA3-201ENST00000261667 COL15A1P39059 1388 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 TESPA1A2RU30 521 aaPredicted RBP10.88□□□□□ -0.67
KPNA3-201ENST00000261667 TK2O00142 265 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 TOMM70O94826 608 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 UGT2B4P06133 528 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 CYP2D6P10635 497 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 LRRC24Q50LG9 513 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 CCDC157Q569K6 752 aa10.88□□□□□ -0.67
KPNA3-201ENST00000261667 SLC30A5Q8TAD4 765 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms