RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 EXD1Q8NHP7 514 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 E2F7Q96AV8 911 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 ASIC4Q96FT7 647 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 VANGL2Q9ULK5 521 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 NEU3Q9UQ49 428 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 NUMBLQ9Y6R0 609 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 CTAGE9A4FU28 777 aa16.33■□□□□ 0.2
CCDC90B-201ENST00000260054 E9PAM4 449 aa16.33■□□□□ 0.2
CCDC90B-201ENST00000260054 GFRA2O00451 464 aa16.33■□□□□ 0.2
CCDC90B-201ENST00000260054 KCNK3O14649 394 aa16.33■□□□□ 0.2
CCDC90B-201ENST00000260054 SRGAP2O75044 1071 aa16.33■□□□□ 0.2
CCDC90B-201ENST00000260054 ECI2O75521 394 aa16.33■□□□□ 0.2
CCDC90B-201ENST00000260054 ZRANB2O95218 330 aaKnown RBP eCLIP16.33■□□□□ 0.2
CCDC90B-201ENST00000260054 GOT1P17174 413 aa16.33■□□□□ 0.2
CCDC90B-201ENST00000260054 CXCR5P32302 372 aa16.33■□□□□ 0.2
CCDC90B-201ENST00000260054 ZNF211Q13398 564 aaPredicted RBP16.33■□□□□ 0.2
CCDC90B-201ENST00000260054 PDK2Q15119 407 aa16.33■□□□□ 0.2
CCDC90B-201ENST00000260054 MFSD7Q6UXD7 560 aa16.33■□□□□ 0.2
CCDC90B-201ENST00000260054 MTSS1LQ765P7 747 aa16.33■□□□□ 0.2
CCDC90B-201ENST00000260054 MFSD6LQ8IWD5 586 aa16.33■□□□□ 0.2
CCDC90B-201ENST00000260054 LGI2Q8N0V4 545 aa16.33■□□□□ 0.2
CCDC90B-201ENST00000260054 KIAA1958Q8N8K9 716 aa16.33■□□□□ 0.2
CCDC90B-201ENST00000260054 TSC1Q92574 1164 aa16.33■□□□□ 0.2
CCDC90B-201ENST00000260054 IGSF8Q969P0 613 aa16.33■□□□□ 0.2
CCDC90B-201ENST00000260054 P2RY11Q96G91 374 aa16.33■□□□□ 0.2
CCDC90B-201ENST00000260054 PRICKLE1Q96MT3 831 aaPredicted RBP16.33■□□□□ 0.2
CCDC90B-201ENST00000260054 CALN1Q9BXU9 219 aa16.33■□□□□ 0.2
CCDC90B-201ENST00000260054 CWC15Q9P013 229 aaKnown RBP16.33■□□□□ 0.2
CCDC90B-201ENST00000260054 TBC1D14Q9P2M4 693 aa16.33■□□□□ 0.2
CCDC90B-201ENST00000260054 THEGQ9P2T0 379 aa16.33■□□□□ 0.2
CCDC90B-201ENST00000260054 FAM50BQ9Y247 325 aa16.33■□□□□ 0.2
CCDC90B-201ENST00000260054 NR2E1Q9Y466 385 aa16.33■□□□□ 0.2
CCDC90B-201ENST00000260054 F5H5T6 163 aa16.32■□□□□ 0.2
CCDC90B-201ENST00000260054 CASQ1P31415 396 aa16.32■□□□□ 0.2
CCDC90B-201ENST00000260054 IRAK1P51617 712 aa16.32■□□□□ 0.2
CCDC90B-201ENST00000260054 SGSHP51688 502 aa16.32■□□□□ 0.2
CCDC90B-201ENST00000260054 FCHO2Q0JRZ9 810 aa16.32■□□□□ 0.2
CCDC90B-201ENST00000260054 GRM2Q14416 872 aa16.32■□□□□ 0.2
CCDC90B-201ENST00000260054 ACBD5Q5T8D3 534 aaPredicted RBP16.32■□□□□ 0.2
CCDC90B-201ENST00000260054 PAPD7Q5XG87 772 aaKnown RBP16.32■□□□□ 0.2
CCDC90B-201ENST00000260054 TRIM68Q6AZZ1 485 aa16.32■□□□□ 0.2
CCDC90B-201ENST00000260054 MAP7D3Q8IWC1 876 aa16.32■□□□□ 0.2
CCDC90B-201ENST00000260054 RCOR2Q8IZ40 523 aa16.32■□□□□ 0.2
CCDC90B-201ENST00000260054 CPXM2Q8N436 756 aa16.32■□□□□ 0.2
CCDC90B-201ENST00000260054 OSCP1Q8WVF1 389 aa16.32■□□□□ 0.2
CCDC90B-201ENST00000260054 RSAD2Q8WXG1 361 aa16.32■□□□□ 0.2
CCDC90B-201ENST00000260054 RBM41Q96IZ5 413 aaKnown RBP16.32■□□□□ 0.2
CCDC90B-201ENST00000260054 ZFYVE19Q96K21 471 aa16.32■□□□□ 0.2
CCDC90B-201ENST00000260054 CSPG4P5Q96PW8 444 aa16.32■□□□□ 0.2
CCDC90B-201ENST00000260054 EPAS1Q99814 870 aa16.32■□□□□ 0.2
CCDC90B-201ENST00000260054 DDX50Q9BQ39 737 aaKnown RBP16.32■□□□□ 0.2
CCDC90B-201ENST00000260054 IGLV3-10A0A075B6K4 115 aa16.31■□□□□ 0.2
CCDC90B-201ENST00000260054 EEF2KO00418 725 aaKnown RBP16.31■□□□□ 0.2
CCDC90B-201ENST00000260054 TSPAN3O60637 253 aa16.31■□□□□ 0.2
CCDC90B-201ENST00000260054 PSMC3P17980 439 aa16.31■□□□□ 0.2
CCDC90B-201ENST00000260054 CHKAP35790 457 aa16.31■□□□□ 0.2
CCDC90B-201ENST00000260054 CDKN2BP42772 138 aa16.31■□□□□ 0.2
CCDC90B-201ENST00000260054 TPI1P60174 286 aa16.31■□□□□ 0.2
CCDC90B-201ENST00000260054 LLGL1Q15334 1064 aa16.31■□□□□ 0.2
CCDC90B-201ENST00000260054 ODF2Q5BJF6 829 aa16.31■□□□□ 0.2
CCDC90B-201ENST00000260054 SPOCD1Q6ZMY3 1216 aa16.31■□□□□ 0.2
CCDC90B-201ENST00000260054 RFX8Q6ZV50 586 aa16.31■□□□□ 0.2
CCDC90B-201ENST00000260054 CCDC50Q8IVM0 306 aa16.31■□□□□ 0.2
CCDC90B-201ENST00000260054 ZDHHC14Q8IZN3 488 aa16.31■□□□□ 0.2
CCDC90B-201ENST00000260054 ADGRG2Q8IZP9 1017 aa16.31■□□□□ 0.2
CCDC90B-201ENST00000260054 PLCD3Q8N3E9 789 aa16.31■□□□□ 0.2
CCDC90B-201ENST00000260054 DEPDC1BQ8WUY9 529 aa16.31■□□□□ 0.2
CCDC90B-201ENST00000260054 RPRD1AQ96P16 312 aaPredicted RBP16.31■□□□□ 0.2
CCDC90B-201ENST00000260054 ZNF670Q9BS34 389 aa16.31■□□□□ 0.2
CCDC90B-201ENST00000260054 CARD9Q9H257 536 aa16.31■□□□□ 0.2
CCDC90B-201ENST00000260054 DUS2Q9NX74 493 aaKnown RBP16.31■□□□□ 0.2
CCDC90B-201ENST00000260054 LIMD1Q9UGP4 676 aa16.31■□□□□ 0.2
CCDC90B-201ENST00000260054 SNX12Q9UMY4 172 aa16.31■□□□□ 0.2
CCDC90B-201ENST00000260054 DRGXA6NNA5 263 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 H3BRJ5 948 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 KIF2AO00139 706 aaPredicted RBP16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 SLC9A3R1O14745 358 aaPredicted RBP16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 EPHB2P29323 1055 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 HOXC13P31276 330 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 ARL4AP40617 200 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 RPS24P62847 133 aaKnown RBP16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 AMPD2Q01433 879 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 TAZQ16635 292 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 EML3Q32P44 896 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 C5orf22Q49AR2 442 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 RWDD4Q6NW29 188 aaKnown RBP16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 LRRC31Q6UY01 552 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 TPGS1Q6ZTW0 290 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 CIR1Q86X95 450 aaPredicted RBP16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 VSIG1Q86XK7 387 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 CFAP52Q8N1V2 620 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 FAF2Q96CS3 445 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 OTUB2Q96DC9 234 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 TBC1D31Q96DN5 1066 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 OSBPL9Q96SU4 736 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 FAM83CQ9BQN1 747 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 THG1LQ9NWX6 298 aaKnown RBP16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 MPP6Q9NZW5 540 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 RCOR3Q9P2K3 495 aaPredicted RBP16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 KIF26AQ9ULI4 1882 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms