RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 LOC102724159A0A0B4J2E5 919 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 BUD23O43709 281 aaKnown RBP6.52□□□□□ -1.37
BRIP1-201ENST00000259008 SH3BGRLO75368 114 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 KRT20P35900 424 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 ALDH9A1P49189 494 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 PPP3CAQ08209 521 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 TP53BP2Q13625 1128 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 PWP2Q15269 919 aaKnown RBP6.52□□□□□ -1.37
BRIP1-201ENST00000259008 IL17AQ16552 155 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 MPPE1Q53F39 396 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 INTS6LQ5JSJ4 861 aaKnown RBP6.52□□□□□ -1.37
BRIP1-201ENST00000259008 C3orf62Q6ZUJ4 267 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 MCOLN2Q8IZK6 566 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 HIPK4Q8NE63 616 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 GLMNQ92990 594 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 WNT8BQ93098 351 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 ABHD8Q96I13 439 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 C9orf72Q96LT7 481 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 ZIC5Q96T25 663 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 TBCBQ99426 244 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 TBL1YQ9BQ87 522 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 IKZF4Q9H2S9 585 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 SEPT3Q9UH03 358 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 Q9Y3F1 56 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 BTAF1O14981 1849 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 ATRNL1Q5VV63 1379 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 CASQ2O14958 399 aaPredicted RBP6.51□□□□□ -1.37
BRIP1-201ENST00000259008 ZSCAN9O15535 394 aaPredicted RBP6.51□□□□□ -1.37
BRIP1-201ENST00000259008 E2F6O75461 281 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 STBD1O95210 358 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 C22orf31O95567 290 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 GYPCP04921 128 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 SNHG28P0DPA3 235 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 HPGDP15428 266 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 NOS2P35228 1153 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 SPRP35270 261 aaPredicted RBP6.51□□□□□ -1.37
BRIP1-201ENST00000259008 ITGA8P53708 1063 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 NCALDP61601 193 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 ZNF268Q14587 947 aaPredicted RBP6.51□□□□□ -1.37
BRIP1-201ENST00000259008 EFTUD2Q15029 972 aaKnown RBP eCLIP6.51□□□□□ -1.37
BRIP1-201ENST00000259008 LRRC14Q15048 493 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 E4F1Q66K89 784 aaPredicted RBP6.51□□□□□ -1.37
BRIP1-201ENST00000259008 OTOAQ7RTW8 1153 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 TMEM192Q8IY95 271 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 DUSP16Q9BY84 665 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 NIFKQ9BYG3 293 aaKnown RBP6.51□□□□□ -1.37
BRIP1-201ENST00000259008 POLR1EQ9GZS1 481 aaKnown RBP6.51□□□□□ -1.37
BRIP1-201ENST00000259008 PRDM12Q9H4Q4 367 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 OSGEPQ9NPF4 335 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 RGS18Q9NS28 235 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 KIF17Q9P2E2 1029 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 ZNF112Q9UJU3 913 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 SSU72P8A0A1W2PR75 194 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 KANSL1LA0AUZ9 987 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 FAM187AA6NFU0 413 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 KCNK1O00180 336 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 SUN1O94901 812 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 CFHP08603 1231 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 ELFN1P0C7U0 828 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 GALNT3Q14435 633 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 CBX2Q14781 532 aaPredicted RBP6.51□□□□□ -1.37
BRIP1-201ENST00000259008 MORF4L2Q15014 288 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 FAM133BQ5BKY9 247 aaKnown RBP6.51□□□□□ -1.37
BRIP1-201ENST00000259008 TTI2Q6NXR4 508 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 PPIL6Q8IXY8 311 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 C12orf76Q8N812 135 aaPredicted RBP6.51□□□□□ -1.37
BRIP1-201ENST00000259008 KLHL23Q8NBE8 558 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 SNX27Q96L92 541 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 ARHGAP26Q9UNA1 814 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 COL1A1P02452 1464 aaPredicted RBP6.51□□□□□ -1.37
BRIP1-201ENST00000259008 USP27XA6NNY8 438 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 CA3P07451 260 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 GPC1P35052 558 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 PCK1P35558 622 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 GLRBP48167 497 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 DGKGP49619 791 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 CAMKK1Q8N5S9 505 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 ANKRD52Q8NB46 1076 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 ZNF384Q8TF68 577 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 KAT5Q92993 513 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 KLF6Q99612 283 aaPredicted RBP6.51□□□□□ -1.37
BRIP1-201ENST00000259008 WRAP53Q9BUR4 548 aaKnown RBP6.51□□□□□ -1.37
BRIP1-201ENST00000259008 SMG9Q9H0W8 520 aaKnown RBP6.51□□□□□ -1.37
BRIP1-201ENST00000259008 DCTN4Q9UJW0 460 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 RUVBL2Q9Y230 463 aaKnown RBP6.51□□□□□ -1.37
BRIP1-201ENST00000259008 CCNT2O60583 730 aaKnown RBP6.51□□□□□ -1.37
BRIP1-201ENST00000259008 SKAP2O75563 359 aaPredicted RBP6.51□□□□□ -1.37
BRIP1-201ENST00000259008 FMO4P31512 558 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 MAXP61244 160 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 CAP1Q01518 475 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 GAD2Q05329 585 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 SMARCB1Q12824 385 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 LONRF1Q17RB8 773 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 LINGO4Q6UY18 593 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 CIR1Q86X95 450 aaPredicted RBP6.51□□□□□ -1.37
BRIP1-201ENST00000259008 ZSWIM2Q8NEG5 633 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 GMLQ99445 158 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 OSBPL2Q9H1P3 480 aa6.51□□□□□ -1.37
BRIP1-201ENST00000259008 ZFP37Q9Y6Q3 630 aaPredicted RBP6.51□□□□□ -1.37
BRIP1-201ENST00000259008 SPEF2Q9C093 1822 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms