RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 OVGP1Q12889 678 aa17.3■□□□□ 0.36
SORT1-201ENST00000256637 TMEM63BQ5T3F8 832 aa17.3■□□□□ 0.36
SORT1-201ENST00000256637 EFL1Q7Z2Z2 1120 aaKnown RBP17.3■□□□□ 0.36
SORT1-201ENST00000256637 HMGB4Q8WW32 186 aa17.3■□□□□ 0.36
SORT1-201ENST00000256637 MKNK1Q9BUB5 465 aa17.3■□□□□ 0.36
SORT1-201ENST00000256637 GRID2IPA4D2P6 1211 aa17.3■□□□□ 0.36
SORT1-201ENST00000256637 CAPN1P07384 714 aa17.3■□□□□ 0.36
SORT1-201ENST00000256637 GCKP35557 465 aa17.3■□□□□ 0.36
SORT1-201ENST00000256637 PLK1P53350 603 aa17.3■□□□□ 0.36
SORT1-201ENST00000256637 HSPA14Q0VDF9 509 aa17.3■□□□□ 0.36
SORT1-201ENST00000256637 BTN2A1Q7KYR7 527 aa17.3■□□□□ 0.36
SORT1-201ENST00000256637 ZNF677Q86XU0 584 aa17.3■□□□□ 0.36
SORT1-201ENST00000256637 IFNL1Q8IU54 200 aa17.3■□□□□ 0.36
SORT1-201ENST00000256637 ELOVL6Q9H5J4 265 aa17.3■□□□□ 0.36
SORT1-201ENST00000256637 ABCC13Q9NSE7 274 aa17.3■□□□□ 0.36
SORT1-201ENST00000256637 RIC8BQ9NVN3 520 aa17.3■□□□□ 0.36
SORT1-201ENST00000256637 NSMCE4AQ9NXX6 385 aa17.3■□□□□ 0.36
SORT1-201ENST00000256637 FDPSP14324 419 aaKnown RBP17.3■□□□□ 0.36
SORT1-201ENST00000256637 MGAT1P26572 445 aa17.3■□□□□ 0.36
SORT1-201ENST00000256637 RTP1P59025 263 aa17.3■□□□□ 0.36
SORT1-201ENST00000256637 SNRPD1P62314 119 aaKnown RBP17.3■□□□□ 0.36
SORT1-201ENST00000256637 CENPCQ03188 943 aa17.3■□□□□ 0.36
SORT1-201ENST00000256637 TROAPQ12815 778 aa17.3■□□□□ 0.36
SORT1-201ENST00000256637 WDR41Q9HAD4 459 aa17.3■□□□□ 0.36
SORT1-201ENST00000256637 FAM105AQ9NUU6 356 aa17.3■□□□□ 0.36
SORT1-201ENST00000256637 PXDNLA1KZ92 1463 aa17.3■□□□□ 0.36
SORT1-201ENST00000256637 YDJCA8MPS7 323 aa17.3■□□□□ 0.36
SORT1-201ENST00000256637 CRADDP78560 199 aa17.3■□□□□ 0.36
SORT1-201ENST00000256637 C16orf62Q7Z3J2 963 aa17.3■□□□□ 0.36
SORT1-201ENST00000256637 FBXO36Q8NEA4 188 aa17.3■□□□□ 0.36
SORT1-201ENST00000256637 SAE1Q9UBE0 346 aaPredicted RBP17.3■□□□□ 0.36
SORT1-201ENST00000256637 PRKAG3Q9UGI9 489 aa17.3■□□□□ 0.36
SORT1-201ENST00000256637 F9P00740 461 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 SERPINA4P29622 427 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 MMP13P45452 471 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 MAPRE2Q15555 327 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 TRADDQ15628 312 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 EFCAB3Q8N7B9 438 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 IL31RAQ8NI17 732 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 TRPC4APQ8TEL6 797 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 ACAT2Q9BWD1 397 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 SEMA6BQ9H3T3 888 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 INO80Q9ULG1 1556 aaPredicted RBP17.29■□□□□ 0.36
SORT1-201ENST00000256637 A0A1W2PQH9 124 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 TBC1D4O60343 1298 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 RARRES1P49788 294 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 GEMIN4P57678 1058 aaKnown RBP17.29■□□□□ 0.36
SORT1-201ENST00000256637 LRRC14BA6NHZ5 514 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 ANXA5P08758 320 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 PMS1P54277 932 aaKnown RBP17.29■□□□□ 0.36
SORT1-201ENST00000256637 MCOLN3Q8TDD5 553 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 TUBGCP4Q9UGJ1 667 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 RPTORQ8N122 1335 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 MSI1O43347 362 aaKnown RBP17.29■□□□□ 0.36
SORT1-201ENST00000256637 RAD51CO43502 376 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 NFKB1P19838 968 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 HTR1BP28222 390 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 SCNN1AP37088 669 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 HSPA9P38646 679 aaKnown RBP17.29■□□□□ 0.36
SORT1-201ENST00000256637 GUCY1A3Q02108 690 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 DENND1BQ6P3S1 775 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 KLRG1Q96E93 195 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 SLC4A9Q96Q91 983 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 THEGQ9P2T0 379 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 TCRBV5S4A2TA0A5A2 114 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 CD44P16070 742 aaKnown RBP17.29■□□□□ 0.36
SORT1-201ENST00000256637 SMAD3P84022 425 aaKnown RBP17.29■□□□□ 0.36
SORT1-201ENST00000256637 ANKRD23Q86SG2 305 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 EXOSC4Q9NPD3 245 aaKnown RBP17.29■□□□□ 0.36
SORT1-201ENST00000256637 OSGEPQ9NPF4 335 aa17.29■□□□□ 0.36
SORT1-201ENST00000256637 POLR2LP62875 67 aaKnown RBP17.29■□□□□ 0.36
SORT1-201ENST00000256637 A0A0B4J269 797 aa17.28■□□□□ 0.36
SORT1-201ENST00000256637 GSNP06396 782 aa17.28■□□□□ 0.36
SORT1-201ENST00000256637 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.28■□□□□ 0.36
SORT1-201ENST00000256637 MTMR8Q96EF0 704 aa17.28■□□□□ 0.36
SORT1-201ENST00000256637 KRCC1Q9NPI7 259 aaPredicted RBP17.28■□□□□ 0.36
SORT1-201ENST00000256637 ADGRG1Q9Y653 693 aa17.28■□□□□ 0.36
SORT1-201ENST00000256637 SNRPFP62306 86 aaKnown RBP17.28■□□□□ 0.36
SORT1-201ENST00000256637 UGCGQ16739 394 aa17.28■□□□□ 0.36
SORT1-201ENST00000256637 C16orf87Q6PH81 154 aa17.28■□□□□ 0.36
SORT1-201ENST00000256637 FBXO38Q6PIJ6 1188 aa17.28■□□□□ 0.36
SORT1-201ENST00000256637 TAF8Q7Z7C8 310 aa17.28■□□□□ 0.36
SORT1-201ENST00000256637 CIR1Q86X95 450 aaPredicted RBP17.28■□□□□ 0.36
SORT1-201ENST00000256637 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.28■□□□□ 0.36
SORT1-201ENST00000256637 MRPL45Q9BRJ2 306 aaKnown RBP17.28■□□□□ 0.36
SORT1-201ENST00000256637 MPP6Q9NZW5 540 aa17.28■□□□□ 0.36
SORT1-201ENST00000256637 CSNK2BP67870 215 aa17.28■□□□□ 0.36
SORT1-201ENST00000256637 INPP5AQ14642 412 aa17.28■□□□□ 0.36
SORT1-201ENST00000256637 CASP10Q92851 521 aa17.28■□□□□ 0.36
SORT1-201ENST00000256637 RBM12Q9NTZ6 932 aaKnown RBP17.28■□□□□ 0.36
SORT1-201ENST00000256637 TBC1D13Q9NVG8 400 aa17.28■□□□□ 0.36
SORT1-201ENST00000256637 F8VP50 259 aa17.28■□□□□ 0.36
SORT1-201ENST00000256637 STBD1O95210 358 aa17.28■□□□□ 0.36
SORT1-201ENST00000256637 GLUD2P49448 558 aa17.28■□□□□ 0.36
SORT1-201ENST00000256637 SEMG2Q02383 582 aa17.28■□□□□ 0.36
SORT1-201ENST00000256637 FGD2Q7Z6J4 655 aa17.28■□□□□ 0.36
SORT1-201ENST00000256637 FAM84AQ96KN4 292 aa17.28■□□□□ 0.36
SORT1-201ENST00000256637 CAMKK2Q96RR4 588 aa17.28■□□□□ 0.36
SORT1-201ENST00000256637 TTPALQ9BTX7 342 aa17.28■□□□□ 0.36
SORT1-201ENST00000256637 NDEL1Q9GZM8 345 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms