RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 ZNF461Q8TAF7 563 aa19.48■□□□□ 0.71
TRIM47-201ENST00000254816 TFB1MQ8WVM0 346 aaKnown RBP19.48■□□□□ 0.71
TRIM47-201ENST00000254816 RTP4Q96DX8 246 aa19.48■□□□□ 0.71
TRIM47-201ENST00000254816 C9orf72Q96LT7 481 aa19.48■□□□□ 0.71
TRIM47-201ENST00000254816 FAM107BQ9H098 131 aa19.48■□□□□ 0.71
TRIM47-201ENST00000254816 CYP4F11Q9HBI6 524 aa19.48■□□□□ 0.71
TRIM47-201ENST00000254816 CFAP69A5D8W1 941 aa19.48■□□□□ 0.71
TRIM47-201ENST00000254816 TMEM63AO94886 807 aa19.48■□□□□ 0.71
TRIM47-201ENST00000254816 FPGSQ05932 587 aa19.48■□□□□ 0.71
TRIM47-201ENST00000254816 AP1B1Q10567 949 aa19.48■□□□□ 0.71
TRIM47-201ENST00000254816 RWDD4Q6NW29 188 aaKnown RBP19.48■□□□□ 0.71
TRIM47-201ENST00000254816 MSANTD2Q6P1R3 559 aa19.48■□□□□ 0.71
TRIM47-201ENST00000254816 PCGF5Q86SE9 256 aa19.48■□□□□ 0.71
TRIM47-201ENST00000254816 DDX53Q86TM3 631 aaKnown RBP19.48■□□□□ 0.71
TRIM47-201ENST00000254816 MIB1Q86YT6 1006 aa19.48■□□□□ 0.71
TRIM47-201ENST00000254816 OSBPL2Q9H1P3 480 aa19.48■□□□□ 0.71
TRIM47-201ENST00000254816 CCSER2Q9H7U1 834 aa19.48■□□□□ 0.71
TRIM47-201ENST00000254816 SAYSD1Q9NPB0 183 aa19.48■□□□□ 0.71
TRIM47-201ENST00000254816 PPANQ9NQ55 473 aaKnown RBP19.48■□□□□ 0.71
TRIM47-201ENST00000254816 AFF4Q9UHB7 1163 aaKnown RBP19.48■□□□□ 0.71
TRIM47-201ENST00000254816 SLC12A6Q9UHW9 1150 aa19.48■□□□□ 0.71
TRIM47-201ENST00000254816 ABLIM3O94929 683 aa19.47■□□□□ 0.71
TRIM47-201ENST00000254816 GJB5O95377 273 aa19.47■□□□□ 0.71
TRIM47-201ENST00000254816 URODP06132 367 aa19.47■□□□□ 0.71
TRIM47-201ENST00000254816 SYN1P17600 705 aa19.47■□□□□ 0.71
TRIM47-201ENST00000254816 CA8P35219 290 aa19.47■□□□□ 0.71
TRIM47-201ENST00000254816 HCAR3P49019 387 aa19.47■□□□□ 0.71
TRIM47-201ENST00000254816 PPP2R2AP63151 447 aa19.47■□□□□ 0.71
TRIM47-201ENST00000254816 PPIGQ13427 754 aaKnown RBP eCLIP19.47■□□□□ 0.719e-7■■□□□ 14.4
TRIM47-201ENST00000254816 FASTKD3Q14CZ7 662 aaKnown RBP19.47■□□□□ 0.71
TRIM47-201ENST00000254816 C10orf120Q5SQS8 335 aa19.47■□□□□ 0.71
TRIM47-201ENST00000254816 HEATR6Q6AI08 1181 aaKnown RBP19.47■□□□□ 0.71
TRIM47-201ENST00000254816 C7orf61Q8IZ16 206 aa19.47■□□□□ 0.71
TRIM47-201ENST00000254816 ARFGAP2Q8N6H7 521 aa19.47■□□□□ 0.71
TRIM47-201ENST00000254816 CCNYQ8ND76 341 aa19.47■□□□□ 0.71
TRIM47-201ENST00000254816 CEP41Q9BYV8 373 aa19.47■□□□□ 0.71
TRIM47-201ENST00000254816 PRDM12Q9H4Q4 367 aa19.47■□□□□ 0.71
TRIM47-201ENST00000254816 RAB6BQ9NRW1 208 aa19.47■□□□□ 0.71
TRIM47-201ENST00000254816 NINJ2Q9NZG7 142 aa19.47■□□□□ 0.71
TRIM47-201ENST00000254816 PAK5Q9P286 719 aa19.47■□□□□ 0.71
TRIM47-201ENST00000254816 SHOC2Q9UQ13 582 aa19.47■□□□□ 0.71
TRIM47-201ENST00000254816 E7EVH7 732 aa19.46■□□□□ 0.71
TRIM47-201ENST00000254816 HMBSP08397 361 aa19.46■□□□□ 0.71
TRIM47-201ENST00000254816 TUFMP49411 452 aaKnown RBP19.46■□□□□ 0.71
TRIM47-201ENST00000254816 TBX4P57082 545 aa19.46■□□□□ 0.71
TRIM47-201ENST00000254816 PPP2R5DQ14738 602 aa19.46■□□□□ 0.71
TRIM47-201ENST00000254816 TRMT10CQ7L0Y3 403 aaKnown RBP19.46■□□□□ 0.71
TRIM47-201ENST00000254816 HTR3CQ8WXA8 447 aa19.46■□□□□ 0.71
TRIM47-201ENST00000254816 FCRL2Q96LA5 508 aaPredicted RBP19.46■□□□□ 0.71
TRIM47-201ENST00000254816 HAPLN3Q96S86 360 aa19.46■□□□□ 0.71
TRIM47-201ENST00000254816 ZBED2Q9BTP6 218 aa19.46■□□□□ 0.71
TRIM47-201ENST00000254816 TSPYL1Q9H0U9 437 aa19.46■□□□□ 0.71
TRIM47-201ENST00000254816 CLIC5Q9NZA1 410 aa19.46■□□□□ 0.71
TRIM47-201ENST00000254816 NEU3Q9UQ49 428 aa19.46■□□□□ 0.71
TRIM47-201ENST00000254816 TLR6Q9Y2C9 796 aa19.46■□□□□ 0.71
TRIM47-201ENST00000254816 TLDC2A0PJX2 215 aa19.46■□□□□ 0.71
TRIM47-201ENST00000254816 KCNU1A8MYU2 1149 aa19.46■□□□□ 0.71
TRIM47-201ENST00000254816 F5H423 210 aaPredicted RBP19.46■□□□□ 0.71
TRIM47-201ENST00000254816 NUDT17P0C025 328 aa19.46■□□□□ 0.71
TRIM47-201ENST00000254816 EIF3BP55884 814 aaKnown RBP19.46■□□□□ 0.71
TRIM47-201ENST00000254816 CORO7P57737 925 aa19.46■□□□□ 0.71
TRIM47-201ENST00000254816 BZW1Q7L1Q6 419 aaKnown RBP19.46■□□□□ 0.71
TRIM47-201ENST00000254816 SLC39A13Q96H72 371 aa19.46■□□□□ 0.71
TRIM47-201ENST00000254816 PRDM16Q9HAZ2 1276 aa19.46■□□□□ 0.71
TRIM47-201ENST00000254816 SEPT10Q9P0V9 454 aa19.46■□□□□ 0.71
TRIM47-201ENST00000254816 HS3ST4Q9Y661 456 aa19.46■□□□□ 0.71
TRIM47-201ENST00000254816 FAM169AQ9Y6X4 670 aa19.46■□□□□ 0.71
TRIM47-201ENST00000254816 CSPG5O95196 566 aa19.45■□□□□ 0.7
TRIM47-201ENST00000254816 MAGEA4P43358 317 aa19.45■□□□□ 0.7
TRIM47-201ENST00000254816 TMEM240Q5SV17 173 aa19.45■□□□□ 0.7
TRIM47-201ENST00000254816 FNBP1LQ5T0N5 605 aa19.45■□□□□ 0.7
TRIM47-201ENST00000254816 C14orf80Q86SX3 495 aa19.45■□□□□ 0.7
TRIM47-201ENST00000254816 NLRP14Q86W24 1093 aa19.45■□□□□ 0.7
TRIM47-201ENST00000254816 FIBCD1Q8N539 461 aa19.45■□□□□ 0.7
TRIM47-201ENST00000254816 ZNF473Q8WTR7 871 aaKnown RBP19.45■□□□□ 0.7
TRIM47-201ENST00000254816 DEPDC1BQ8WUY9 529 aa19.45■□□□□ 0.7
TRIM47-201ENST00000254816 CELF6Q96J87 481 aaKnown RBP19.45■□□□□ 0.7
TRIM47-201ENST00000254816 DOCK4Q8N1I0 1966 aa19.45■□□□□ 0.7
TRIM47-201ENST00000254816 FGF18O76093 207 aa19.45■□□□□ 0.7
TRIM47-201ENST00000254816 METTL18O95568 372 aa19.45■□□□□ 0.7
TRIM47-201ENST00000254816 TTC4O95801 387 aa19.45■□□□□ 0.7
TRIM47-201ENST00000254816 LINC00271P0C7V0 271 aa19.45■□□□□ 0.7
TRIM47-201ENST00000254816 PSEN1P49768 467 aa19.45■□□□□ 0.7
TRIM47-201ENST00000254816 PDK1Q15118 436 aa19.45■□□□□ 0.7
TRIM47-201ENST00000254816 PRKD1Q15139 912 aaPredicted RBP19.45■□□□□ 0.7
TRIM47-201ENST00000254816 MSS51Q4VC12 460 aa19.45■□□□□ 0.7
TRIM47-201ENST00000254816 P2RY11Q96G91 374 aa19.45■□□□□ 0.7
TRIM47-201ENST00000254816 CCT8L2Q96SF2 557 aa19.45■□□□□ 0.7
TRIM47-201ENST00000254816 TTLL2Q9BWV7 592 aa19.45■□□□□ 0.7
TRIM47-201ENST00000254816 ETNK1Q9HBU6 452 aa19.45■□□□□ 0.7
TRIM47-201ENST00000254816 COMMD8Q9NX08 183 aa19.45■□□□□ 0.7
TRIM47-201ENST00000254816 MARCH2Q9P0N8 246 aa19.45■□□□□ 0.7
TRIM47-201ENST00000254816 PCDHB12Q9Y5F1 795 aa19.45■□□□□ 0.7
TRIM47-201ENST00000254816 ANAPC1Q9H1A4 1944 aa19.45■□□□□ 0.7
TRIM47-201ENST00000254816 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.44■□□□□ 0.7
TRIM47-201ENST00000254816 SLC12A8A0AV02 714 aa19.44■□□□□ 0.7
TRIM47-201ENST00000254816 HACD1B0YJ81 288 aa19.44■□□□□ 0.7
TRIM47-201ENST00000254816 ZDHHC11BP0C7U3 371 aa19.44■□□□□ 0.7
TRIM47-201ENST00000254816 SPATA31D3P0C874 917 aa19.44■□□□□ 0.7
TRIM47-201ENST00000254816 HTRA4P83105 476 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms