RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.37■□□□□ 0.05
UBE4B-201ENST00000253251 ARHGAP10A1A4S6 786 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 LZTS3O60299 673 aaPredicted RBP15.37■□□□□ 0.05
UBE4B-201ENST00000253251 CES1P23141 567 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 CHKAP35790 457 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 ARHGAP1Q07960 439 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 MTM1Q13496 603 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 INPP5AQ14642 412 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 C15orf59Q2T9L4 293 aaPredicted RBP15.37■□□□□ 0.05
UBE4B-201ENST00000253251 HTATIP2Q9BUP3 242 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 IL22Q9GZX6 179 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 SLC4A7Q9Y6M7 1214 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 EOMESO95936 686 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 VCLP18206 1134 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 HADHBP55084 474 aaKnown RBP15.37■□□□□ 0.05
UBE4B-201ENST00000253251 PSMD5Q16401 504 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 FAM187BQ17R55 369 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 PPP1R26Q5T8A7 1209 aaPredicted RBP15.37■□□□□ 0.05
UBE4B-201ENST00000253251 DSG4Q86SJ6 1040 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 C1orf127Q8N9H9 656 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 SNX31Q8N9S9 440 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 AGR3Q8TD06 166 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 LPPQ93052 612 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 ERP27Q96DN0 273 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 NFKBIZQ9BYH8 718 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 ACP6Q9NPH0 428 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 ETNK2Q9NVF9 386 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 RCCD1A6NED2 376 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 SLC25A52Q3SY17 297 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 TMEM139Q8IV31 216 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 ZYG11BQ9C0D3 744 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 HIPK3Q9H422 1215 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 WWOXQ9NZC7 414 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 RNF112Q9ULX5 631 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 NWD2Q9ULI1 1742 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 TRAV19A0A0A6YYK7 116 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 GPR25O00155 361 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 E2F6O75461 281 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 GJB6O95452 261 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 POLR2LP62875 67 aaKnown RBP15.36■□□□□ 0.05
UBE4B-201ENST00000253251 STX5Q13190 355 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 PRPF18Q99633 342 aaKnown RBP15.36■□□□□ 0.05
UBE4B-201ENST00000253251 MRPL45Q9BRJ2 306 aaKnown RBP15.36■□□□□ 0.05
UBE4B-201ENST00000253251 RAD18Q9NS91 495 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 NCKIPSDQ9NZQ3 722 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 RUVBL2Q9Y230 463 aaKnown RBP15.36■□□□□ 0.05
UBE4B-201ENST00000253251 REXO2Q9Y3B8 237 aaKnown RBP15.36■□□□□ 0.05
UBE4B-201ENST00000253251 ENO1P06733 434 aaKnown RBP15.36■□□□□ 0.05
UBE4B-201ENST00000253251 ERAP2Q6P179 960 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 LRRC8DQ7L1W4 858 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 RASGEF1CQ8N431 466 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 VPS37AQ8NEZ2 397 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 ADAM32Q8TC27 787 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 SLC26A7Q8TE54 656 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 DEFB118Q96PH6 123 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 TTPALQ9BTX7 342 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 TEX12Q9BXU0 123 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 PHTF1Q9UMS5 762 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 SYN3O14994 580 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 PRPF4O43172 522 aaKnown RBP eCLIP15.36■□□□□ 0.05
UBE4B-201ENST00000253251 CDK7P50613 346 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 PTK2BQ14289 1009 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 TFAP2DQ7Z6R9 452 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 KCNMB4Q86W47 210 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 ARID3BQ8IVW6 561 aaPredicted RBP15.36■□□□□ 0.05
UBE4B-201ENST00000253251 PRELID2Q8N945 189 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 NSL1Q96IY1 281 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 SIKE1Q9BRV8 207 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 TSR3Q9UJK0 312 aaKnown RBP15.36■□□□□ 0.05
UBE4B-201ENST00000253251 ZNF510Q9Y2H8 683 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 USP54Q70EL1 1684 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 MTA2O94776 668 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 ATP5BP06576 529 aaKnown RBP15.36■□□□□ 0.05
UBE4B-201ENST00000253251 FECHP22830 423 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 CD99L2Q8TCZ2 262 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 APOL2Q9BQE5 337 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 ZCCHC2Q9C0B9 1178 aaKnown RBP15.36■□□□□ 0.05
UBE4B-201ENST00000253251 ACTL7BQ9Y614 415 aa15.36■□□□□ 0.05
UBE4B-201ENST00000253251 TPBGLP0DKB5 382 aa15.35■□□□□ 0.05
UBE4B-201ENST00000253251 CYP2A6P11509 494 aaPredicted RBP15.35■□□□□ 0.05
UBE4B-201ENST00000253251 CPA3P15088 417 aa15.35■□□□□ 0.05
UBE4B-201ENST00000253251 ELNP15502 786 aa15.35■□□□□ 0.05
UBE4B-201ENST00000253251 TYMPP19971 482 aa15.35■□□□□ 0.05
UBE4B-201ENST00000253251 SPDYAQ5MJ70 313 aa15.35■□□□□ 0.05
UBE4B-201ENST00000253251 RARS2Q5T160 578 aaKnown RBP15.35■□□□□ 0.05
UBE4B-201ENST00000253251 RASIP1Q5U651 963 aa15.35■□□□□ 0.05
UBE4B-201ENST00000253251 RFX8Q6ZV50 586 aa15.35■□□□□ 0.05
UBE4B-201ENST00000253251 NECAB2Q7Z6G3 386 aa15.35■□□□□ 0.05
UBE4B-201ENST00000253251 HS6ST3Q8IZP7 471 aa15.35■□□□□ 0.05
UBE4B-201ENST00000253251 HIPK4Q8NE63 616 aa15.35■□□□□ 0.05
UBE4B-201ENST00000253251 COL16A1Q07092 1604 aaPredicted RBP15.35■□□□□ 0.05
UBE4B-201ENST00000253251 GRB14Q14449 540 aa15.35■□□□□ 0.05
UBE4B-201ENST00000253251 LRRC34Q8IZ02 419 aa15.35■□□□□ 0.05
UBE4B-201ENST00000253251 GPAMQ9HCL2 828 aa15.35■□□□□ 0.05
UBE4B-201ENST00000253251 MARCOQ9UEW3 520 aaPredicted RBP15.35■□□□□ 0.05
UBE4B-201ENST00000253251 ZNF7P17097 686 aaPredicted RBP15.35■□□□□ 0.05
UBE4B-201ENST00000253251 KDSRQ06136 332 aa15.35■□□□□ 0.05
UBE4B-201ENST00000253251 ZC3H12AQ5D1E8 599 aaKnown RBP15.35■□□□□ 0.05
UBE4B-201ENST00000253251 PARP9Q8IXQ6 854 aa15.35■□□□□ 0.05
UBE4B-201ENST00000253251 STK40Q8N2I9 435 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms