RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 ATP6V1C1P21283 382 aa26.27■■□□□ 1.8
RAB40C-201ENST00000248139 C10orf107Q8IVU9 208 aa26.27■■□□□ 1.8
RAB40C-201ENST00000248139 TRIM42Q8IWZ5 723 aa26.27■■□□□ 1.8
RAB40C-201ENST00000248139 ARRDC4Q8NCT1 418 aa26.27■■□□□ 1.8
RAB40C-201ENST00000248139 APPL2Q8NEU8 664 aa26.27■■□□□ 1.8
RAB40C-201ENST00000248139 UCMAQ8WVF2 138 aa26.27■■□□□ 1.8
RAB40C-201ENST00000248139 SCG3Q8WXD2 468 aaKnown RBP26.27■■□□□ 1.8
RAB40C-201ENST00000248139 MRPL42Q9Y6G3 142 aaKnown RBP26.27■■□□□ 1.8
RAB40C-201ENST00000248139 CCDC78A2IDD5 438 aa26.27■■□□□ 1.8
RAB40C-201ENST00000248139 PIRO00625 290 aa26.27■■□□□ 1.8
RAB40C-201ENST00000248139 FGF3P11487 239 aaPredicted RBP26.27■■□□□ 1.8
RAB40C-201ENST00000248139 WASHC5Q12768 1159 aa26.27■■□□□ 1.8
RAB40C-201ENST00000248139 PID1Q7Z2X4 250 aa26.27■■□□□ 1.8
RAB40C-201ENST00000248139 CRYBG2Q8N1P7 616 aa26.27■■□□□ 1.8
RAB40C-201ENST00000248139 OR52K1Q8NGK4 314 aa26.27■■□□□ 1.8
RAB40C-201ENST00000248139 STMN2Q93045 179 aa26.27■■□□□ 1.8
RAB40C-201ENST00000248139 FCRL3Q96P31 734 aaPredicted RBP26.27■■□□□ 1.8
RAB40C-201ENST00000248139 APOL2Q9BQE5 337 aa26.27■■□□□ 1.8
RAB40C-201ENST00000248139 CCDC106Q9BWC9 280 aa26.27■■□□□ 1.8
RAB40C-201ENST00000248139 TMEM216Q9P0N5 145 aa26.27■■□□□ 1.8
RAB40C-201ENST00000248139 STOML1Q9UBI4 398 aa26.27■■□□□ 1.8
RAB40C-201ENST00000248139 C6orf222P0C671 652 aaPredicted RBP26.26■■□□□ 1.79
RAB40C-201ENST00000248139 NIPAL4Q0D2K0 466 aa26.26■■□□□ 1.79
RAB40C-201ENST00000248139 CBLBQ13191 982 aa26.26■■□□□ 1.79
RAB40C-201ENST00000248139 SNAPC2Q13487 334 aa26.26■■□□□ 1.79
RAB40C-201ENST00000248139 TEDDM1Q5T9Z0 273 aa26.26■■□□□ 1.79
RAB40C-201ENST00000248139 MBLAC2Q68D91 279 aa26.26■■□□□ 1.79
RAB40C-201ENST00000248139 TNS4Q8IZW8 715 aa26.26■■□□□ 1.79
RAB40C-201ENST00000248139 PIGVQ9NUD9 493 aa26.26■■□□□ 1.79
RAB40C-201ENST00000248139 E7ENQ6 273 aa26.26■■□□□ 1.79
RAB40C-201ENST00000248139 CYP2C9P11712 490 aa26.26■■□□□ 1.79
RAB40C-201ENST00000248139 SERPINB9P50453 376 aa26.26■■□□□ 1.79
RAB40C-201ENST00000248139 SNX16P57768 344 aa26.26■■□□□ 1.79
RAB40C-201ENST00000248139 DGKDQ16760 1214 aa26.26■■□□□ 1.79
RAB40C-201ENST00000248139 SLC25A52Q3SY17 297 aa26.26■■□□□ 1.79
RAB40C-201ENST00000248139 ZNF333Q96JL9 665 aa26.26■■□□□ 1.79
RAB40C-201ENST00000248139 OXCT2Q9BYC2 517 aaPredicted RBP26.26■■□□□ 1.79
RAB40C-201ENST00000248139 SLC24A3Q9HC58 644 aa26.26■■□□□ 1.79
RAB40C-201ENST00000248139 UBQLN1Q9UMX0 589 aaKnown RBP26.26■■□□□ 1.79
RAB40C-201ENST00000248139 SNX10Q9Y5X0 201 aa26.26■■□□□ 1.79
RAB40C-201ENST00000248139 RPS6KL1Q9Y6S9 549 aa26.26■■□□□ 1.79
RAB40C-201ENST00000248139 I6L893 689 aaPredicted RBP26.25■■□□□ 1.79
RAB40C-201ENST00000248139 SORBS2O94875 1100 aaKnown RBP26.25■■□□□ 1.79
RAB40C-201ENST00000248139 PRKCGP05129 697 aa26.25■■□□□ 1.79
RAB40C-201ENST00000248139 ITGA2BP08514 1039 aa26.25■■□□□ 1.79
RAB40C-201ENST00000248139 SARNPP82979 210 aaKnown RBP26.25■■□□□ 1.79
RAB40C-201ENST00000248139 PEX6Q13608 980 aa26.25■■□□□ 1.79
RAB40C-201ENST00000248139 SHCBP1Q8NEM2 672 aa26.25■■□□□ 1.79
RAB40C-201ENST00000248139 NUP205Q92621 2012 aa26.25■■□□□ 1.79
RAB40C-201ENST00000248139 THAP1Q9NVV9 213 aa26.25■■□□□ 1.79
RAB40C-201ENST00000248139 MKS1Q9NXB0 559 aa26.25■■□□□ 1.79
RAB40C-201ENST00000248139 GSTA2P09210 222 aa26.25■■□□□ 1.79
RAB40C-201ENST00000248139 SLC1A6P48664 564 aa26.25■■□□□ 1.79
RAB40C-201ENST00000248139 SLC25A3Q00325 362 aa26.25■■□□□ 1.79
RAB40C-201ENST00000248139 LRRC8BQ6P9F7 803 aa26.25■■□□□ 1.79
RAB40C-201ENST00000248139 RASSF3Q86WH2 238 aa26.25■■□□□ 1.79
RAB40C-201ENST00000248139 B3GALNT2Q8NCR0 500 aa26.25■■□□□ 1.79
RAB40C-201ENST00000248139 SLC10A4Q96EP9 437 aa26.25■■□□□ 1.79
RAB40C-201ENST00000248139 ZFP42Q96MM3 310 aa26.25■■□□□ 1.79
RAB40C-201ENST00000248139 TIMM13Q9Y5L4 95 aaPredicted RBP26.25■■□□□ 1.79
RAB40C-201ENST00000248139 GOLGA8TH3BQL2 631 aa26.24■■□□□ 1.79
RAB40C-201ENST00000248139 NRP1O14786 923 aa26.24■■□□□ 1.79
RAB40C-201ENST00000248139 SMIM10L2AP0DMW4 78 aa26.24■■□□□ 1.79
RAB40C-201ENST00000248139 SMIM10L2BP0DMW5 78 aa26.24■■□□□ 1.79
RAB40C-201ENST00000248139 MAP3K7CLP57077 242 aa26.24■■□□□ 1.79
RAB40C-201ENST00000248139 PCLAFQ15004 111 aa26.24■■□□□ 1.79
RAB40C-201ENST00000248139 DUSP28Q4G0W2 176 aa26.24■■□□□ 1.79
RAB40C-201ENST00000248139 CAPRIN2Q6IMN6 1127 aaKnown RBP26.24■■□□□ 1.79
RAB40C-201ENST00000248139 LRRC74BQ6ZQY2 392 aa26.24■■□□□ 1.79
RAB40C-201ENST00000248139 MAVSQ7Z434 540 aa26.24■■□□□ 1.79
RAB40C-201ENST00000248139 TMPRSS6Q8IU80 811 aa26.24■■□□□ 1.79
RAB40C-201ENST00000248139 AGR3Q8TD06 166 aa26.24■■□□□ 1.79
RAB40C-201ENST00000248139 AGAP2Q99490 1192 aa26.24■■□□□ 1.79
RAB40C-201ENST00000248139 ZFATQ9P243 1243 aa26.24■■□□□ 1.79
RAB40C-201ENST00000248139 MORF4L1Q9UBU8 362 aa26.24■■□□□ 1.79
RAB40C-201ENST00000248139 TAGLN3Q9UI15 199 aa26.24■■□□□ 1.79
RAB40C-201ENST00000248139 SPECC1L-ADORA2AF8WAN1 911 aa26.24■■□□□ 1.79
RAB40C-201ENST00000248139 PLIN3O60664 434 aa26.24■■□□□ 1.79
RAB40C-201ENST00000248139 ALDH1A2O94788 518 aa26.24■■□□□ 1.79
RAB40C-201ENST00000248139 LMNAP02545 664 aaKnown RBP26.24■■□□□ 1.79
RAB40C-201ENST00000248139 DARSP14868 501 aaKnown RBP26.24■■□□□ 1.79
RAB40C-201ENST00000248139 VHLP40337 213 aa26.24■■□□□ 1.79
RAB40C-201ENST00000248139 SLC34A1Q06495 639 aa26.24■■□□□ 1.79
RAB40C-201ENST00000248139 DLG2Q15700 870 aa26.24■■□□□ 1.79
RAB40C-201ENST00000248139 SMYD5Q6GMV2 418 aa26.24■■□□□ 1.79
RAB40C-201ENST00000248139 PAQR9Q6ZVX9 377 aa26.24■■□□□ 1.79
RAB40C-201ENST00000248139 STRADAQ7RTN6 431 aa26.24■■□□□ 1.79
RAB40C-201ENST00000248139 EMID1Q96A84 441 aaPredicted RBP26.24■■□□□ 1.79
RAB40C-201ENST00000248139 PANX3Q96QZ0 392 aa26.24■■□□□ 1.79
RAB40C-201ENST00000248139 CAB39LQ9H9S4 337 aa26.24■■□□□ 1.79
RAB40C-201ENST00000248139 DERAQ9Y315 318 aa26.24■■□□□ 1.79
RAB40C-201ENST00000248139 TRIP12Q14669 1992 aaPredicted RBP26.23■■□□□ 1.79
RAB40C-201ENST00000248139 RBM47A0AV96 593 aaKnown RBP26.23■■□□□ 1.79
RAB40C-201ENST00000248139 MEIS3P2A8K0S8 358 aa26.23■■□□□ 1.79
RAB40C-201ENST00000248139 KIAA0319Q5VV43 1072 aa26.23■■□□□ 1.79
RAB40C-201ENST00000248139 STEAP4Q687X5 459 aa26.23■■□□□ 1.79
RAB40C-201ENST00000248139 C4orf22Q6V702 233 aa26.23■■□□□ 1.79
RAB40C-201ENST00000248139 MARK2Q7KZI7 788 aaKnown RBP26.23■■□□□ 1.79
RAB40C-201ENST00000248139 SCUBE1Q8IWY4 988 aa26.23■■□□□ 1.79
RAB40C-201ENST00000248139 KBTBD2Q8IY47 623 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms