RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 WASH4PA8MWX3 477 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 CHADO15335 359 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 MTSS1O43312 755 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 MSI1O43347 362 aaKnown RBP14.64□□□□□ -0.07
SDF2-201ENST00000247020 TLR5O60602 858 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 STK10O94804 968 aaKnown RBP14.64□□□□□ -0.07
SDF2-201ENST00000247020 C1RP00736 705 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 ZSCAN5DPP0CG00 497 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 ATP2A2P16615 1042 aaKnown RBP14.64□□□□□ -0.07
SDF2-201ENST00000247020 HMGA1P17096 107 aaKnown RBP14.64□□□□□ -0.07
SDF2-201ENST00000247020 EPHB2P29323 1055 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 GGCXP38435 758 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 MAGEA6P43360 314 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 MLLT6P55198 1093 aaPredicted RBP14.64□□□□□ -0.07
SDF2-201ENST00000247020 UBE3AQ05086 875 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 EFEMP1Q12805 493 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 C10orf120Q5SQS8 335 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 NUGGCQ68CJ6 796 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 PPP1R21Q6ZMI0 780 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 ITIH5Q86UX2 942 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 NAT8LQ8N9F0 302 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 PRCCQ92733 491 aaPredicted RBP14.64□□□□□ -0.07
SDF2-201ENST00000247020 HDAC11Q96DB2 347 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 RETREG1Q9H6L5 497 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 NEU3Q9UQ49 428 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 PLAAQ9Y263 795 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 INSL5Q9Y5Q6 135 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 GOLGA8KD6RF30 607 aa14.63□□□□□ -0.07
SDF2-201ENST00000247020 TEX28O15482 410 aa14.63□□□□□ -0.07
SDF2-201ENST00000247020 TLL1O43897 1013 aa14.63□□□□□ -0.07
SDF2-201ENST00000247020 ATP5C1P36542 298 aaKnown RBP14.63□□□□□ -0.07
SDF2-201ENST00000247020 EPHB3P54753 998 aa14.63□□□□□ -0.07
SDF2-201ENST00000247020 COG7P83436 770 aa14.63□□□□□ -0.07
SDF2-201ENST00000247020 PPIDQ08752 370 aaKnown RBP14.63□□□□□ -0.07
SDF2-201ENST00000247020 RTL10Q7L3V2 364 aa14.63□□□□□ -0.07
SDF2-201ENST00000247020 PRUNE1Q86TP1 453 aa14.63□□□□□ -0.07
SDF2-201ENST00000247020 KLHL23Q8NBE8 558 aa14.63□□□□□ -0.07
SDF2-201ENST00000247020 HTR3CQ8WXA8 447 aa14.63□□□□□ -0.07
SDF2-201ENST00000247020 CPT1BQ92523 772 aa14.63□□□□□ -0.07
SDF2-201ENST00000247020 PSMG2Q969U7 264 aa14.63□□□□□ -0.07
SDF2-201ENST00000247020 KLC2Q9H0B6 622 aa14.63□□□□□ -0.07
SDF2-201ENST00000247020 TRPM5Q9NZQ8 1165 aa14.63□□□□□ -0.07
SDF2-201ENST00000247020 PPARGC1AQ9UBK2 798 aaKnown RBP14.63□□□□□ -0.07
SDF2-201ENST00000247020 DNMT3LQ9UJW3 386 aa14.63□□□□□ -0.07
SDF2-201ENST00000247020 MAGED2Q9UNF1 606 aaPredicted RBP14.63□□□□□ -0.07
SDF2-201ENST00000247020 ZNF840PA6NDX5 716 aa14.62□□□□□ -0.07
SDF2-201ENST00000247020 H0YGN5 161 aa14.62□□□□□ -0.07
SDF2-201ENST00000247020 PRRG1O14668 218 aa14.62□□□□□ -0.07
SDF2-201ENST00000247020 OPHN1O60890 802 aa14.62□□□□□ -0.07
SDF2-201ENST00000247020 SYF2O95926 243 aaKnown RBP14.62□□□□□ -0.07
SDF2-201ENST00000247020 ADH1AP07327 375 aa14.62□□□□□ -0.07
SDF2-201ENST00000247020 BMPR1AP36894 532 aa14.62□□□□□ -0.07
SDF2-201ENST00000247020 GALNT2Q10471 571 aa14.62□□□□□ -0.07
SDF2-201ENST00000247020 TAF12Q16514 161 aa14.62□□□□□ -0.07
SDF2-201ENST00000247020 KCTD19Q17RG1 926 aaPredicted RBP14.62□□□□□ -0.07
SDF2-201ENST00000247020 DENND2CQ68D51 928 aa14.62□□□□□ -0.07
SDF2-201ENST00000247020 CCDC149Q6ZUS6 474 aa14.62□□□□□ -0.07
SDF2-201ENST00000247020 LRRC49Q8IUZ0 686 aa14.62□□□□□ -0.07
SDF2-201ENST00000247020 AZIN2Q96A70 460 aa14.62□□□□□ -0.07
SDF2-201ENST00000247020 TTC25Q96NG3 672 aa14.62□□□□□ -0.07
SDF2-201ENST00000247020 LBHD1Q9BQE6 289 aaPredicted RBP14.62□□□□□ -0.07
SDF2-201ENST00000247020 C10orf88Q9H8K7 445 aa14.62□□□□□ -0.07
SDF2-201ENST00000247020 NUDT5Q9UKK9 219 aa14.62□□□□□ -0.07
SDF2-201ENST00000247020 MFHAS1Q9Y4C4 1052 aa14.62□□□□□ -0.07
SDF2-201ENST00000247020 HS3ST4Q9Y661 456 aa14.62□□□□□ -0.07
SDF2-201ENST00000247020 NFS1Q9Y697 457 aa14.62□□□□□ -0.07
SDF2-201ENST00000247020 IGLV3-10A0A075B6K4 115 aa14.61□□□□□ -0.07
SDF2-201ENST00000247020 A0A0A0MRY4 1105 aa14.61□□□□□ -0.07
SDF2-201ENST00000247020 E9PAM4 449 aa14.61□□□□□ -0.07
SDF2-201ENST00000247020 C5orf67F2Z3F1 127 aa14.61□□□□□ -0.07
SDF2-201ENST00000247020 RIPK2O43353 540 aa14.61□□□□□ -0.07
SDF2-201ENST00000247020 DNAJB2P25686 324 aa14.61□□□□□ -0.07
SDF2-201ENST00000247020 OAS2P29728 719 aaKnown RBP14.61□□□□□ -0.07
SDF2-201ENST00000247020 CHKAP35790 457 aa14.61□□□□□ -0.07
SDF2-201ENST00000247020 FDFT1P37268 417 aa14.61□□□□□ -0.07
SDF2-201ENST00000247020 ARL4CP56559 192 aa14.61□□□□□ -0.07
SDF2-201ENST00000247020 KCNJ11Q14654 390 aa14.61□□□□□ -0.07
SDF2-201ENST00000247020 HECTD3Q5T447 861 aa14.61□□□□□ -0.07
SDF2-201ENST00000247020 LRRC31Q6UY01 552 aa14.61□□□□□ -0.07
SDF2-201ENST00000247020 CENPUQ71F23 418 aa14.61□□□□□ -0.07
SDF2-201ENST00000247020 CCDC25Q86WR0 208 aa14.61□□□□□ -0.07
SDF2-201ENST00000247020 EXOC4Q96A65 974 aa14.61□□□□□ -0.07
SDF2-201ENST00000247020 PLD4Q96BZ4 506 aa14.61□□□□□ -0.07
SDF2-201ENST00000247020 ZNF512Q96ME7 567 aaPredicted RBP14.61□□□□□ -0.07
SDF2-201ENST00000247020 SPATA13Q96N96 652 aa14.61□□□□□ -0.07
SDF2-201ENST00000247020 RBM15Q96T37 977 aaKnown RBP eCLIP14.61□□□□□ -0.07
SDF2-201ENST00000247020 VAT1Q99536 393 aa14.61□□□□□ -0.07
SDF2-201ENST00000247020 TMEM109Q9BVC6 243 aa14.61□□□□□ -0.07
SDF2-201ENST00000247020 EMILIN2Q9BXX0 1053 aa14.61□□□□□ -0.07
SDF2-201ENST00000247020 SIK2Q9H0K1 926 aa14.61□□□□□ -0.07
SDF2-201ENST00000247020 EPB41L4BQ9H329 900 aa14.61□□□□□ -0.07
SDF2-201ENST00000247020 CDC42EP4Q9H3Q1 356 aaKnown RBP14.61□□□□□ -0.07
SDF2-201ENST00000247020 PRDM12Q9H4Q4 367 aa14.61□□□□□ -0.07
SDF2-201ENST00000247020 SLC12A8A0AV02 714 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 GOLGA6L10A6NI86 522 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 SPDYE4A6NLX3 237 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 E7ESA3 106 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 H3BQF6 201 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 MAP3K6O95382 1288 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 TTC4O95801 387 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms