RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 SPATA17Q96L03 361 aa17.53■□□□□ 0.4
CDKN1A-201ENST00000244741 ELAC2Q9BQ52 826 aaKnown RBP17.53■□□□□ 0.4
CDKN1A-201ENST00000244741 ADAM33Q9BZ11 813 aa17.53■□□□□ 0.4
CDKN1A-201ENST00000244741 TBK1Q9UHD2 729 aa17.53■□□□□ 0.4
CDKN1A-201ENST00000244741 ZNF638Q14966 1978 aaKnown RBP17.53■□□□□ 0.4
CDKN1A-201ENST00000244741 COL4A4P53420 1690 aaPredicted RBP17.53■□□□□ 0.4
CDKN1A-201ENST00000244741 PATJQ8NI35 1801 aa17.53■□□□□ 0.4
CDKN1A-201ENST00000244741 DNALI1O14645 258 aaPredicted RBP17.53■□□□□ 0.4
CDKN1A-201ENST00000244741 FYNP06241 537 aa17.53■□□□□ 0.4
CDKN1A-201ENST00000244741 ATP5DP30049 168 aa17.53■□□□□ 0.4
CDKN1A-201ENST00000244741 HNRNPH1P31943 449 aaKnown RBP17.53■□□□□ 0.4
CDKN1A-201ENST00000244741 ARSEP51690 589 aa17.53■□□□□ 0.4
CDKN1A-201ENST00000244741 YWHAZP63104 245 aaKnown RBP17.53■□□□□ 0.4
CDKN1A-201ENST00000244741 TFDP3Q5H9I0 405 aa17.53■□□□□ 0.4
CDKN1A-201ENST00000244741 BSPRYQ5W0U4 402 aa17.53■□□□□ 0.4
CDKN1A-201ENST00000244741 PM20D1Q6GTS8 502 aa17.53■□□□□ 0.4
CDKN1A-201ENST00000244741 SLC26A9Q7LBE3 791 aa17.53■□□□□ 0.4
CDKN1A-201ENST00000244741 DNAJB7Q7Z6W7 309 aaPredicted RBP17.53■□□□□ 0.4
CDKN1A-201ENST00000244741 SCD5Q86SK9 330 aa17.53■□□□□ 0.4
CDKN1A-201ENST00000244741 ZDHHC17Q8IUH5 632 aa17.53■□□□□ 0.4
CDKN1A-201ENST00000244741 C12orf76Q8N812 135 aaPredicted RBP17.53■□□□□ 0.4
CDKN1A-201ENST00000244741 KCNK9Q9NPC2 374 aa17.53■□□□□ 0.4
CDKN1A-201ENST00000244741 LGALS13Q9UHV8 139 aa17.53■□□□□ 0.4
CDKN1A-201ENST00000244741 DRG1Q9Y295 367 aaKnown RBP17.53■□□□□ 0.4
CDKN1A-201ENST00000244741 MYO16Q9Y6X6 1858 aa17.52■□□□□ 0.4
CDKN1A-201ENST00000244741 FBXO21O94952 628 aa17.52■□□□□ 0.4
CDKN1A-201ENST00000244741 LRG1P02750 347 aa17.52■□□□□ 0.4
CDKN1A-201ENST00000244741 LTFP02788 710 aa17.52■□□□□ 0.4
CDKN1A-201ENST00000244741 NCAM1P13591 858 aa17.52■□□□□ 0.4
CDKN1A-201ENST00000244741 HMGA1P17096 107 aaKnown RBP17.52■□□□□ 0.4
CDKN1A-201ENST00000244741 PSMA2P25787 234 aa17.52■□□□□ 0.4
CDKN1A-201ENST00000244741 PTPN7P35236 360 aa17.52■□□□□ 0.4
CDKN1A-201ENST00000244741 EPHB3P54753 998 aa17.52■□□□□ 0.4
CDKN1A-201ENST00000244741 GSCP56915 257 aaPredicted RBP17.52■□□□□ 0.4
CDKN1A-201ENST00000244741 OASLQ15646 514 aaKnown RBP17.52■□□□□ 0.4
CDKN1A-201ENST00000244741 LACTB2Q53H82 288 aaPredicted RBP17.52■□□□□ 0.4
CDKN1A-201ENST00000244741 EFHC1Q5JVL4 640 aa17.52■□□□□ 0.4
CDKN1A-201ENST00000244741 ARFGAP1Q8N6T3 406 aa17.52■□□□□ 0.4
CDKN1A-201ENST00000244741 ANKRD42Q8N9B4 389 aa17.52■□□□□ 0.4
CDKN1A-201ENST00000244741 MRPL38Q96DV4 380 aaKnown RBP17.52■□□□□ 0.4
CDKN1A-201ENST00000244741 ACTR5Q9H9F9 607 aaPredicted RBP17.52■□□□□ 0.4
CDKN1A-201ENST00000244741 MLXIPLQ9NP71 852 aa17.52■□□□□ 0.4
CDKN1A-201ENST00000244741 HCFC1R1Q9NWW0 138 aa17.52■□□□□ 0.4
CDKN1A-201ENST00000244741 DDX56Q9NY93 547 aaKnown RBP17.52■□□□□ 0.4
CDKN1A-201ENST00000244741 GREB1Q4ZG55 1949 aa17.52■□□□□ 0.39
CDKN1A-201ENST00000244741 C3orf70A6NLC5 250 aaPredicted RBP17.52■□□□□ 0.39
CDKN1A-201ENST00000244741 C2CD4BA6NLJ0 364 aa17.52■□□□□ 0.39
CDKN1A-201ENST00000244741 CAPN9O14815 690 aa17.52■□□□□ 0.39
CDKN1A-201ENST00000244741 ATXN1P54253 815 aaKnown RBP17.52■□□□□ 0.39
CDKN1A-201ENST00000244741 VCPP55072 806 aaKnown RBP17.52■□□□□ 0.39
CDKN1A-201ENST00000244741 YWHAGP61981 247 aaKnown RBP eCLIP17.52■□□□□ 0.39
CDKN1A-201ENST00000244741 GPS1Q13098 491 aa17.52■□□□□ 0.39
CDKN1A-201ENST00000244741 STAT4Q14765 748 aa17.52■□□□□ 0.39
CDKN1A-201ENST00000244741 CCDC14Q49A88 953 aa17.52■□□□□ 0.39
CDKN1A-201ENST00000244741 PPM1LQ5SGD2 360 aa17.52■□□□□ 0.39
CDKN1A-201ENST00000244741 PDE12Q6L8Q7 609 aaKnown RBP17.52■□□□□ 0.39
CDKN1A-201ENST00000244741 HS6ST3Q8IZP7 471 aa17.52■□□□□ 0.39
CDKN1A-201ENST00000244741 VN1R2Q8NFZ6 395 aa17.52■□□□□ 0.39
CDKN1A-201ENST00000244741 CCHCR1Q8TD31 782 aa17.52■□□□□ 0.39
CDKN1A-201ENST00000244741 DYDC1Q8WWB3 177 aa17.52■□□□□ 0.39
CDKN1A-201ENST00000244741 APOL5Q9BWW9 433 aa17.52■□□□□ 0.39
CDKN1A-201ENST00000244741 FOXP3Q9BZS1 431 aa17.52■□□□□ 0.39
CDKN1A-201ENST00000244741 FBXO44Q9H4M3 255 aa17.52■□□□□ 0.39
CDKN1A-201ENST00000244741 ZNF334Q9HCZ1 680 aaPredicted RBP17.52■□□□□ 0.39
CDKN1A-201ENST00000244741 SAYSD1Q9NPB0 183 aa17.52■□□□□ 0.39
CDKN1A-201ENST00000244741 SCML2Q9UQR0 700 aa17.52■□□□□ 0.39
CDKN1A-201ENST00000244741 CCT8L1PA6NM43 557 aa17.51■□□□□ 0.39
CDKN1A-201ENST00000244741 RTN3O95197 1032 aaPredicted RBP17.51■□□□□ 0.39
CDKN1A-201ENST00000244741 TBX18O95935 607 aa17.51■□□□□ 0.39
CDKN1A-201ENST00000244741 BRAFP15056 766 aa17.51■□□□□ 0.39
CDKN1A-201ENST00000244741 GPD1P21695 349 aa17.51■□□□□ 0.39
CDKN1A-201ENST00000244741 VEPH1Q14D04 833 aa17.51■□□□□ 0.39
CDKN1A-201ENST00000244741 NKD2Q969F2 451 aaPredicted RBP17.51■□□□□ 0.39
CDKN1A-201ENST00000244741 ZNF512Q96ME7 567 aaPredicted RBP17.51■□□□□ 0.39
CDKN1A-201ENST00000244741 KDM4CQ9H3R0 1056 aa17.51■□□□□ 0.39
CDKN1A-201ENST00000244741 POPDC2Q9HBU9 364 aa17.51■□□□□ 0.39
CDKN1A-201ENST00000244741 HSFX1Q9UBD0 423 aa17.51■□□□□ 0.39
CDKN1A-201ENST00000244741 TPX2Q9ULW0 747 aaKnown RBP17.51■□□□□ 0.39
CDKN1A-201ENST00000244741 NRG2O14511 850 aaPredicted RBP17.5■□□□□ 0.39
CDKN1A-201ENST00000244741 LINC01565O15544 149 aa17.5■□□□□ 0.39
CDKN1A-201ENST00000244741 CDH16O75309 829 aa17.5■□□□□ 0.39
CDKN1A-201ENST00000244741 PECAM1P16284 738 aaPredicted RBP17.5■□□□□ 0.39
CDKN1A-201ENST00000244741 IL1R2P27930 398 aa17.5■□□□□ 0.39
CDKN1A-201ENST00000244741 SCTRP47872 440 aa17.5■□□□□ 0.39
CDKN1A-201ENST00000244741 ITIH4Q14624 930 aa17.5■□□□□ 0.39
CDKN1A-201ENST00000244741 SMTNL2Q2TAL5 461 aa17.5■□□□□ 0.39
CDKN1A-201ENST00000244741 TCEAL5Q5H9L2 206 aa17.5■□□□□ 0.39
CDKN1A-201ENST00000244741 CCDC149Q6ZUS6 474 aa17.5■□□□□ 0.39
CDKN1A-201ENST00000244741 CCDC77Q9BR77 488 aa17.5■□□□□ 0.39
CDKN1A-201ENST00000244741 TMEM121Q9BTD3 319 aa17.5■□□□□ 0.39
CDKN1A-201ENST00000244741 ZWILCHQ9H900 591 aa17.5■□□□□ 0.39
CDKN1A-201ENST00000244741 EURLQ9NYK6 297 aa17.5■□□□□ 0.39
CDKN1A-201ENST00000244741 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.5■□□□□ 0.393e-6■■□□□ 13.4
CDKN1A-201ENST00000244741 SAMD15Q9P1V8 674 aa17.5■□□□□ 0.39
CDKN1A-201ENST00000244741 SAE1Q9UBE0 346 aaPredicted RBP17.5■□□□□ 0.39
CDKN1A-201ENST00000244741 TCP11X1B4DZS4 312 aa17.5■□□□□ 0.39
CDKN1A-201ENST00000244741 MDM4O15151 490 aa17.5■□□□□ 0.39
CDKN1A-201ENST00000244741 LRCH4O75427 683 aa17.5■□□□□ 0.39
CDKN1A-201ENST00000244741 ABHD2P08910 425 aa17.5■□□□□ 0.39
CDKN1A-201ENST00000244741 CSH1P0DML2 217 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms