RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 ZNF534Q76KX8 674 aa23.95■■□□□ 1.42
MSX2-201ENST00000239243 SH3TC2Q8TF17 1288 aa23.95■■□□□ 1.42
MSX2-201ENST00000239243 DCAKDQ8WVC6 231 aa23.95■■□□□ 1.42
MSX2-201ENST00000239243 HDAC11Q96DB2 347 aa23.95■■□□□ 1.42
MSX2-201ENST00000239243 MRPL9Q9BYD2 267 aaKnown RBP23.95■■□□□ 1.42
MSX2-201ENST00000239243 SEPT10Q9P0V9 454 aa23.95■■□□□ 1.42
MSX2-201ENST00000239243 IGSF9Q9P2J2 1179 aa23.95■■□□□ 1.42
MSX2-201ENST00000239243 FAM169AQ9Y6X4 670 aa23.95■■□□□ 1.42
MSX2-201ENST00000239243 LRIG2O94898 1065 aa23.94■■□□□ 1.42
MSX2-201ENST00000239243 ALDH2P05091 517 aa23.94■■□□□ 1.42
MSX2-201ENST00000239243 INHBAP08476 426 aa23.94■■□□□ 1.42
MSX2-201ENST00000239243 CCR1P32246 355 aa23.94■■□□□ 1.42
MSX2-201ENST00000239243 MAGEA11P43364 429 aa23.94■■□□□ 1.42
MSX2-201ENST00000239243 IL9RQ01113 521 aa23.94■■□□□ 1.42
MSX2-201ENST00000239243 NUP93Q8N1F7 819 aa23.94■■□□□ 1.42
MSX2-201ENST00000239243 AGGF1Q8N302 714 aaeCLIP23.94■■□□□ 1.42
MSX2-201ENST00000239243 ARHGAP18Q8N392 663 aa23.94■■□□□ 1.42
MSX2-201ENST00000239243 SLC44A1Q8WWI5 657 aa23.94■■□□□ 1.42
MSX2-201ENST00000239243 ALKBH8Q96BT7 664 aaKnown RBP23.94■■□□□ 1.42
MSX2-201ENST00000239243 CASD1Q96PB1 797 aa23.94■■□□□ 1.42
MSX2-201ENST00000239243 EBNA1BP2Q99848 306 aaKnown RBP23.94■■□□□ 1.42
MSX2-201ENST00000239243 AMHP03971 560 aa23.94■■□□□ 1.42
MSX2-201ENST00000239243 WASHC5Q12768 1159 aa23.94■■□□□ 1.42
MSX2-201ENST00000239243 GPNMBQ14956 572 aa23.94■■□□□ 1.42
MSX2-201ENST00000239243 KBTBD12Q3ZCT8 623 aa23.94■■□□□ 1.42
MSX2-201ENST00000239243 CTXN3Q4LDR2 81 aa23.94■■□□□ 1.42
MSX2-201ENST00000239243 LRRC34Q8IZ02 419 aa23.94■■□□□ 1.42
MSX2-201ENST00000239243 SEC16BQ96JE7 1060 aa23.94■■□□□ 1.42
MSX2-201ENST00000239243 SIGLEC10Q96LC7 697 aa23.94■■□□□ 1.42
MSX2-201ENST00000239243 UNC93B1Q9H1C4 597 aa23.94■■□□□ 1.42
MSX2-201ENST00000239243 SAMD15Q9P1V8 674 aa23.94■■□□□ 1.42
MSX2-201ENST00000239243 SCML2Q9UQR0 700 aa23.94■■□□□ 1.42
MSX2-201ENST00000239243 KIAA0754O94854 1291 aa23.93■■□□□ 1.42
MSX2-201ENST00000239243 GALNT2Q10471 571 aa23.93■■□□□ 1.42
MSX2-201ENST00000239243 ELAVL2Q12926 359 aaKnown RBP23.93■■□□□ 1.42
MSX2-201ENST00000239243 MRPL58Q14197 206 aaKnown RBP23.93■■□□□ 1.42
MSX2-201ENST00000239243 PPP2R5DQ14738 602 aa23.93■■□□□ 1.42
MSX2-201ENST00000239243 FAM171A1Q5VUB5 890 aa23.93■■□□□ 1.42
MSX2-201ENST00000239243 MON1AQ86VX9 555 aa23.93■■□□□ 1.42
MSX2-201ENST00000239243 ZNF567Q8N184 647 aa23.93■■□□□ 1.42
MSX2-201ENST00000239243 MAGEB18Q96M61 343 aa23.93■■□□□ 1.42
MSX2-201ENST00000239243 PRKCHP24723 683 aa23.92■■□□□ 1.42
MSX2-201ENST00000239243 LRRC8BQ6P9F7 803 aa23.92■■□□□ 1.42
MSX2-201ENST00000239243 YTHDF3Q7Z739 585 aaKnown RBP23.92■■□□□ 1.42
MSX2-201ENST00000239243 CABS1Q96KC9 395 aa23.92■■□□□ 1.42
MSX2-201ENST00000239243 SERPINB11Q96P15 392 aa23.92■■□□□ 1.42
MSX2-201ENST00000239243 VAT1Q99536 393 aa23.92■■□□□ 1.42
MSX2-201ENST00000239243 TTLL3Q9Y4R7 772 aa23.92■■□□□ 1.42
MSX2-201ENST00000239243 APOEP02649 317 aa23.92■■□□□ 1.42
MSX2-201ENST00000239243 COG7P83436 770 aa23.92■■□□□ 1.42
MSX2-201ENST00000239243 ZNF33AQ06730 810 aa23.92■■□□□ 1.42
MSX2-201ENST00000239243 FAM182AQ5T1J6 154 aa23.92■■□□□ 1.42
MSX2-201ENST00000239243 PID1Q7Z2X4 250 aa23.92■■□□□ 1.42
MSX2-201ENST00000239243 SCD5Q86SK9 330 aa23.92■■□□□ 1.42
MSX2-201ENST00000239243 CEP57Q86XR8 500 aa23.92■■□□□ 1.42
MSX2-201ENST00000239243 NPAS4Q8IUM7 802 aa23.92■■□□□ 1.42
MSX2-201ENST00000239243 CCNJLQ8IV13 435 aa23.92■■□□□ 1.42
MSX2-201ENST00000239243 GSDMBQ8TAX9 411 aa23.92■■□□□ 1.42
MSX2-201ENST00000239243 PAK6Q9NQU5 681 aaPredicted RBP23.92■■□□□ 1.42
MSX2-201ENST00000239243 KLHL8Q9P2G9 620 aaPredicted RBP23.92■■□□□ 1.42
MSX2-201ENST00000239243 TRHDEQ9UKU6 1024 aa23.92■■□□□ 1.42
MSX2-201ENST00000239243 NR2E3Q9Y5X4 410 aa23.92■■□□□ 1.42
MSX2-201ENST00000239243 MAD1L1Q9Y6D9 718 aa23.92■■□□□ 1.42
MSX2-201ENST00000239243 MYO16Q9Y6X6 1858 aa23.92■■□□□ 1.42
MSX2-201ENST00000239243 PARNO95453 639 aaKnown RBP23.91■■□□□ 1.42
MSX2-201ENST00000239243 CA4P22748 312 aa23.91■■□□□ 1.42
MSX2-201ENST00000239243 SPARCL1Q14515 664 aa23.91■■□□□ 1.42
MSX2-201ENST00000239243 SLC26A11Q86WA9 606 aa23.91■■□□□ 1.42
MSX2-201ENST00000239243 LRRC6Q86X45 466 aa23.91■■□□□ 1.42
MSX2-201ENST00000239243 C4orf33Q8N1A6 199 aa23.91■■□□□ 1.42
MSX2-201ENST00000239243 NPWQ8N729 165 aa23.91■■□□□ 1.42
MSX2-201ENST00000239243 ANKS4BQ8N8V4 417 aa23.91■■□□□ 1.42
MSX2-201ENST00000239243 TMEM175Q9BSA9 504 aa23.91■■□□□ 1.42
MSX2-201ENST00000239243 ZNF180Q9UJW8 692 aa23.91■■□□□ 1.42
MSX2-201ENST00000239243 FGF10O15520 208 aaPredicted RBP23.91■■□□□ 1.42
MSX2-201ENST00000239243 SPAG7O75391 227 aa23.91■■□□□ 1.42
MSX2-201ENST00000239243 ZWINTO95229 277 aa23.91■■□□□ 1.42
MSX2-201ENST00000239243 KRT4P19013 534 aa23.91■■□□□ 1.42
MSX2-201ENST00000239243 FGFR3P22607 806 aa23.91■■□□□ 1.42
MSX2-201ENST00000239243 GARSP41250 739 aaKnown RBP23.91■■□□□ 1.42
MSX2-201ENST00000239243 SMARCB1Q12824 385 aa23.91■■□□□ 1.42
MSX2-201ENST00000239243 LGSNQ5TDP6 509 aa23.91■■□□□ 1.42
MSX2-201ENST00000239243 PDCD7Q8N8D1 485 aaKnown RBP23.91■■□□□ 1.42
MSX2-201ENST00000239243 GDAP1Q8TB36 358 aa23.91■■□□□ 1.42
MSX2-201ENST00000239243 MZB1Q8WU39 189 aa23.91■■□□□ 1.42
MSX2-201ENST00000239243 NAT9Q9BTE0 207 aa23.91■■□□□ 1.42
MSX2-201ENST00000239243 OXCT2Q9BYC2 517 aaPredicted RBP23.91■■□□□ 1.42
MSX2-201ENST00000239243 KIF9Q9HAQ2 790 aa23.91■■□□□ 1.42
MSX2-201ENST00000239243 MLXIPLQ9NP71 852 aa23.91■■□□□ 1.42
MSX2-201ENST00000239243 A0A1W2PPM1 405 aa23.9■■□□□ 1.42
MSX2-201ENST00000239243 TYROBPO43914 113 aa23.9■■□□□ 1.42
MSX2-201ENST00000239243 PTPN3P26045 913 aa23.9■■□□□ 1.42
MSX2-201ENST00000239243 PSMB4P28070 264 aa23.9■■□□□ 1.42
MSX2-201ENST00000239243 ITPRIPL1Q6GPH6 555 aa23.9■■□□□ 1.42
MSX2-201ENST00000239243 UNC5AQ6ZN44 842 aa23.9■■□□□ 1.42
MSX2-201ENST00000239243 CYS1Q717R9 158 aa23.9■■□□□ 1.42
MSX2-201ENST00000239243 PIGWQ7Z7B1 504 aa23.9■■□□□ 1.42
MSX2-201ENST00000239243 NETO2Q8NC67 525 aa23.9■■□□□ 1.42
MSX2-201ENST00000239243 CCDC197Q8NCU1 140 aa23.9■■□□□ 1.42
MSX2-201ENST00000239243 DENND1AQ8TEH3 1009 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms