RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 CDKL3Q8IVW4 592 aaPredicted RBP11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 NIPA2Q8N8Q9 360 aa11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 NTAN1Q96AB6 310 aa11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 ATP13A1Q9HD20 1204 aa11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 SLC25A13Q9UJS0 675 aa11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 E9PAM4 449 aa11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 EIF3EP60228 445 aaKnown RBP11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 PFKPQ01813 784 aa11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 CALCOCO2Q13137 446 aa11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 TTC39BQ5VTQ0 682 aaPredicted RBP11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 RETSATQ6NUM9 610 aa11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 ARHGEF18Q6ZSZ5 1173 aa11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 KATNAL2Q8IYT4 538 aa11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 RUNDC3BQ96NL0 473 aa11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 AP1M1Q9BXS5 423 aa11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 DNAJC17Q9NVM6 304 aaKnown RBP11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 MPP6Q9NZW5 540 aa11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 CBX4O00257 560 aa11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 ZNF189O75820 626 aaPredicted RBP11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 STC2O76061 302 aa11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 ATP5BP06576 529 aaKnown RBP11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 LINC00271P0C7V0 271 aa11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 L1CAMP32004 1257 aa11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 PITX1P78337 314 aaPredicted RBP11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 SLC7A9P82251 487 aa11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 MFSD7Q6UXD7 560 aa11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 RFX8Q6ZV50 586 aa11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 HOOK3Q86VS8 718 aa11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 NPAS3Q8IXF0 933 aa11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 GANCQ8TET4 914 aa11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 RNF38Q9H0F5 515 aa11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 GOT1P17174 413 aa11.46□□□□□ -0.57
TNFAIP3-201ENST00000237289 POLR2EP19388 210 aaKnown RBP11.46□□□□□ -0.57
TNFAIP3-201ENST00000237289 NUMBP49757 651 aa11.46□□□□□ -0.57
TNFAIP3-201ENST00000237289 OGDHQ02218 1023 aa11.46□□□□□ -0.57
TNFAIP3-201ENST00000237289 C8orf74Q6P047 294 aa11.46□□□□□ -0.57
TNFAIP3-201ENST00000237289 SYCE2Q6PIF2 218 aa11.46□□□□□ -0.57
TNFAIP3-201ENST00000237289 CELF6Q96J87 481 aaKnown RBP11.46□□□□□ -0.57
TNFAIP3-201ENST00000237289 PHF7Q9BWX1 381 aaPredicted RBP11.46□□□□□ -0.57
TNFAIP3-201ENST00000237289 FZD10Q9ULW2 581 aa11.46□□□□□ -0.57
TNFAIP3-201ENST00000237289 CTNNA1P35221 906 aaKnown RBP11.46□□□□□ -0.57
TNFAIP3-201ENST00000237289 KRT35Q92764 455 aa11.46□□□□□ -0.57
TNFAIP3-201ENST00000237289 EBF3Q9H4W6 596 aa11.46□□□□□ -0.57
TNFAIP3-201ENST00000237289 PRDM16Q9HAZ2 1276 aa11.46□□□□□ -0.57
TNFAIP3-201ENST00000237289 KIAA1522Q9P206 1035 aaPredicted RBP11.46□□□□□ -0.57
TNFAIP3-201ENST00000237289 A0A1B0GVM2 712 aa11.46□□□□□ -0.58
TNFAIP3-201ENST00000237289 TCAF2A6NFQ2 919 aa11.46□□□□□ -0.58
TNFAIP3-201ENST00000237289 HTR7P34969 479 aa11.46□□□□□ -0.58
TNFAIP3-201ENST00000237289 VPS41P49754 854 aa11.46□□□□□ -0.58
TNFAIP3-201ENST00000237289 MLLT6P55198 1093 aaPredicted RBP11.46□□□□□ -0.58
TNFAIP3-201ENST00000237289 ZNF670Q9BS34 389 aa11.46□□□□□ -0.58
TNFAIP3-201ENST00000237289 C2orf49Q9BVC5 232 aaPredicted RBP11.46□□□□□ -0.58
TNFAIP3-201ENST00000237289 POMKQ9H5K3 350 aa11.46□□□□□ -0.58
TNFAIP3-201ENST00000237289 MTMR10Q9NXD2 777 aa11.46□□□□□ -0.58
TNFAIP3-201ENST00000237289 UTP11Q9Y3A2 253 aaKnown RBP11.46□□□□□ -0.58
TNFAIP3-201ENST00000237289 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.46□□□□□ -0.58
TNFAIP3-201ENST00000237289 ZNF500O60304 480 aaPredicted RBP11.46□□□□□ -0.58
TNFAIP3-201ENST00000237289 LRIG2O94898 1065 aa11.46□□□□□ -0.58
TNFAIP3-201ENST00000237289 VNN2O95498 520 aa11.46□□□□□ -0.58
TNFAIP3-201ENST00000237289 OAS1P00973 400 aaKnown RBP11.46□□□□□ -0.58
TNFAIP3-201ENST00000237289 LAMP2P13473 410 aa11.46□□□□□ -0.58
TNFAIP3-201ENST00000237289 ERCC2P18074 760 aa11.46□□□□□ -0.58
TNFAIP3-201ENST00000237289 GEMIN4P57678 1058 aaKnown RBP11.46□□□□□ -0.58
TNFAIP3-201ENST00000237289 ANKRD20A8PQ5CZ79 823 aa11.46□□□□□ -0.58
TNFAIP3-201ENST00000237289 FAM78AQ5JUQ0 283 aa11.46□□□□□ -0.58
TNFAIP3-201ENST00000237289 BBS7Q8IWZ6 715 aa11.46□□□□□ -0.58
TNFAIP3-201ENST00000237289 ZNF707Q96C28 371 aaPredicted RBP11.46□□□□□ -0.58
TNFAIP3-201ENST00000237289 PCDH18Q9HCL0 1135 aa11.46□□□□□ -0.58
TNFAIP3-201ENST00000237289 OSER1Q9NX31 292 aa11.46□□□□□ -0.58
TNFAIP3-201ENST00000237289 SALL4Q9UJQ4 1053 aa11.46□□□□□ -0.58
TNFAIP3-201ENST00000237289 AGO1Q9UL18 857 aaKnown RBP11.46□□□□□ -0.58
TNFAIP3-201ENST00000237289 NCAM2O15394 837 aa11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 MAP3K6O95382 1288 aa11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 GRAMD4Q6IC98 578 aa11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 TAB3Q8N5C8 712 aaPredicted RBP11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 RAPGEF5Q92565 580 aa11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 USP13Q92995 863 aaPredicted RBP11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 OSBPL2Q9H1P3 480 aa11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 IL37Q9NZH6 218 aa11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 TBX10O75333 385 aa11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 APODP05090 189 aa11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 ADH5P11766 374 aa11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 RHOQP17081 205 aa11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 TFE3P19532 575 aaPredicted RBP11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 CDH4P55283 916 aa11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 SLC5A9Q2M3M2 681 aa11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 SLC13A5Q86YT5 568 aaPredicted RBP11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 C1orf54Q8WWF1 131 aa11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 CARD6Q9BX69 1037 aa11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 KLF16Q9BXK1 252 aaPredicted RBP11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 TRIM31Q9BZY9 425 aa11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 IL21Q9HBE4 155 aa11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 MRPS17Q9Y2R5 130 aaKnown RBP11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 SNX10Q9Y5X0 201 aa11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 HS3ST4Q9Y661 456 aa11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 RALGAPA2Q2PPJ7 1873 aa11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 GOLGA6L7A0A1B0GV03 622 aa11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 RBP3P10745 1247 aa11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 PYGMP11217 842 aa11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 ADCY8P40145 1251 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms