RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 SLC7A6OSQ96CW6 309 aaPredicted RBP16.64■□□□□ 0.25
UBE3D-201ENST00000237186 C7orf26Q96N11 449 aa16.64■□□□□ 0.25
UBE3D-201ENST00000237186 TRIM56Q9BRZ2 755 aaKnown RBP16.64■□□□□ 0.25
UBE3D-201ENST00000237186 TUBB6Q9BUF5 446 aa16.64■□□□□ 0.25
UBE3D-201ENST00000237186 ZFYVE28Q9HCC9 887 aa16.64■□□□□ 0.25
UBE3D-201ENST00000237186 TNPO2O14787 897 aaKnown RBP16.63■□□□□ 0.25
UBE3D-201ENST00000237186 HGSO14964 777 aaPredicted RBP16.63■□□□□ 0.25
UBE3D-201ENST00000237186 GPR182O15218 404 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 BIRC5O15392 142 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 ERCC2P18074 760 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 BGNP21810 368 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 PAX3P23760 479 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 PCSK1P29120 753 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 AFF1P51825 1210 aaKnown RBP16.63■□□□□ 0.25
UBE3D-201ENST00000237186 CDK18Q07002 472 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 UPP1Q16831 310 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 PREPLQ4J6C6 727 aaPredicted RBP16.63■□□□□ 0.25
UBE3D-201ENST00000237186 GNASQ5JWF2 1037 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 GDF6Q6KF10 455 aaPredicted RBP16.63■□□□□ 0.25
UBE3D-201ENST00000237186 DSTYKQ6XUX3 929 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 BHLHA9Q7RTU4 235 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 CLNKQ7Z7G1 428 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 SCML4Q8N228 414 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 C3orf58Q8NDZ4 430 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 DEPDC1BQ8WUY9 529 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 IRGQQ8WZA9 623 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 CDKL2Q92772 493 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 UTP4Q969X6 686 aaKnown RBP16.63■□□□□ 0.25
UBE3D-201ENST00000237186 KCNK16Q96T55 309 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 UPF3AQ9H1J1 476 aaKnown RBP16.63■□□□□ 0.25
UBE3D-201ENST00000237186 TMEM30AQ9NV96 361 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 LNPEPQ9UIQ6 1025 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 ZFP69BQ9UJL9 534 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 SYNJ2BP-COX16A0A087WUM0 186 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 FAM72CH0Y354 149 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 I6L893 689 aaPredicted RBP16.63■□□□□ 0.25
UBE3D-201ENST00000237186 LTFP02788 710 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 ARFIP2P53365 341 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 SREBF2Q12772 1141 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 OVGP1Q12889 678 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 BMPR2Q13873 1038 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 ARL13BQ3SXY8 428 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 TAF1BQ53T94 588 aaPredicted RBP16.63■□□□□ 0.25
UBE3D-201ENST00000237186 FAM72AQ5TYM5 149 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 ATG16L1Q676U5 607 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 PM20D1Q6GTS8 502 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 FAM72DQ6L9T8 149 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 FAM171BQ6P995 826 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 GPRIN1Q7Z2K8 1008 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 MTDHQ86UE4 582 aaKnown RBP16.63■□□□□ 0.25
UBE3D-201ENST00000237186 FAM72BQ86X60 149 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 CCNYQ8ND76 341 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 SMARCD1Q96GM5 515 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 ANLNQ9NQW6 1124 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 COX16Q9P0S2 106 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 HAO1Q9UJM8 370 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 DOCK3Q8IZD9 2030 aa16.63■□□□□ 0.25
UBE3D-201ENST00000237186 MTSS1O43312 755 aa16.62■□□□□ 0.25
UBE3D-201ENST00000237186 WFS1O76024 890 aa16.62■□□□□ 0.25
UBE3D-201ENST00000237186 CYP11A1P05108 521 aa16.62■□□□□ 0.25
UBE3D-201ENST00000237186 CYBAP13498 195 aa16.62■□□□□ 0.25
UBE3D-201ENST00000237186 NCAM1P13591 858 aa16.62■□□□□ 0.25
UBE3D-201ENST00000237186 TARSP26639 723 aaKnown RBP16.62■□□□□ 0.25
UBE3D-201ENST00000237186 PSMB4P28070 264 aa16.62■□□□□ 0.25
UBE3D-201ENST00000237186 CACNA2D1P54289 1103 aa16.62■□□□□ 0.25
UBE3D-201ENST00000237186 PPIDQ08752 370 aaKnown RBP16.62■□□□□ 0.25
UBE3D-201ENST00000237186 FRG1Q14331 258 aaKnown RBP16.62■□□□□ 0.25
UBE3D-201ENST00000237186 MROH9Q5TGP6 573 aa16.62■□□□□ 0.25
UBE3D-201ENST00000237186 FAM91A1Q658Y4 838 aa16.62■□□□□ 0.25
UBE3D-201ENST00000237186 KYAT3Q6YP21 454 aaKnown RBP16.62■□□□□ 0.25
UBE3D-201ENST00000237186 BEND5Q7L4P6 421 aa16.62■□□□□ 0.25
UBE3D-201ENST00000237186 NDUFAF2Q8N183 169 aa16.62■□□□□ 0.25
UBE3D-201ENST00000237186 RTP3Q9BQQ7 232 aa16.62■□□□□ 0.25
UBE3D-201ENST00000237186 ACBD6Q9BR61 282 aa16.62■□□□□ 0.25
UBE3D-201ENST00000237186 COLEC11Q9BWP8 271 aa16.62■□□□□ 0.25
UBE3D-201ENST00000237186 TLE6Q9H808 572 aa16.62■□□□□ 0.25
UBE3D-201ENST00000237186 CACNG4Q9UBN1 327 aa16.62■□□□□ 0.25
UBE3D-201ENST00000237186 DCTN4Q9UJW0 460 aa16.62■□□□□ 0.25
UBE3D-201ENST00000237186 ABT1Q9ULW3 272 aaKnown RBP16.62■□□□□ 0.25
UBE3D-201ENST00000237186 TIMM13Q9Y5L4 95 aaPredicted RBP16.62■□□□□ 0.25
UBE3D-201ENST00000237186 USP17L7P0C7H9 530 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 NEFHP12036 1026 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 PTPN3P26045 913 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 MGAT1P26572 445 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 CXCR3P49682 368 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 SCNN1GP51170 649 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 GTF2A1P52655 376 aaPredicted RBP16.61■□□□□ 0.25
UBE3D-201ENST00000237186 IFRD2Q12894 506 aaPredicted RBP16.61■□□□□ 0.25
UBE3D-201ENST00000237186 CRHR2Q13324 411 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 CRYMQ14894 314 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 TIGD5Q53EQ6 642 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 CXCL17Q6UXB2 119 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 PID1Q7Z2X4 250 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 ARMC2Q8NEN0 867 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 LPPQ93052 612 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 E2F7Q96AV8 911 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 SKA1Q96BD8 255 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 SLC13A1Q9BZW2 595 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 RPL26L1Q9UNX3 145 aaKnown RBP16.61■□□□□ 0.25
UBE3D-201ENST00000237186 NUMBLQ9Y6R0 609 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms