RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 AGAP11Q8TF27 550 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 GTF3C2Q8WUA4 911 aaPredicted RBP13.67□□□□□ -0.22
NEK4-201ENST00000233027 NSMCE2Q96MF7 247 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 RIBC2Q9H4K1 309 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 SETD4Q9NVD3 440 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 LACTBL1A8MY62 500 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 TNFAIP8O95379 198 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 POMCP01189 267 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 CCR1P32246 355 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 LHX1P48742 406 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 NCKAP1LP55160 1127 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 STARD3Q14849 445 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 NCF4Q15080 339 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 REXO4Q9GZR2 422 aaKnown RBP13.67□□□□□ -0.22
NEK4-201ENST00000233027 VTI1BQ9UEU0 232 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 LIMD1Q9UGP4 676 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 DUSP12Q9UNI6 340 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 FRMPD1Q5SYB0 1578 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 CLOCKO15516 846 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 ATG7O95352 703 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 SKIV2L2P42285 1042 aaKnown RBP13.67□□□□□ -0.22
NEK4-201ENST00000233027 CYP4Z1Q86W10 505 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 PGM2Q96G03 612 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 KLHL20Q9Y2M5 609 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 MAGEB16A2A368 324 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 ZNF839A8K0R7 811 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 PTGES3LE9PB15 166 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 ALDH9A1P49189 494 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 EIF2B2P49770 351 aaKnown RBP13.67□□□□□ -0.22
NEK4-201ENST00000233027 MYBPC2Q14324 1141 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 DDR2Q16832 855 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 TRIM48Q8IWZ4 208 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 FBXO39Q8N4B4 442 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 EFCAB3Q8N7B9 438 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 PACSIN3Q9UKS6 424 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 MEGF6O75095 1541 aa13.66□□□□□ -0.22
NEK4-201ENST00000233027 TTLL13PA6NNM8 815 aa13.66□□□□□ -0.22
NEK4-201ENST00000233027 ZNF268Q14587 947 aaPredicted RBP13.66□□□□□ -0.22
NEK4-201ENST00000233027 DGKKQ5KSL6 1271 aa13.66□□□□□ -0.22
NEK4-201ENST00000233027 RSBN1Q5VWQ0 802 aaPredicted RBP13.66□□□□□ -0.22
NEK4-201ENST00000233027 EID3Q8N140 333 aa13.66□□□□□ -0.22
NEK4-201ENST00000233027 PCDH20Q8N6Y1 951 aaKnown RBP13.66□□□□□ -0.22
NEK4-201ENST00000233027 C19orf18Q8NEA5 215 aa13.66□□□□□ -0.22
NEK4-201ENST00000233027 SPPL2AQ8TCT8 520 aa13.66□□□□□ -0.22
NEK4-201ENST00000233027 LRRN4Q8WUT4 740 aa13.66□□□□□ -0.22
NEK4-201ENST00000233027 KRCC1Q9NPI7 259 aaPredicted RBP13.66□□□□□ -0.22
NEK4-201ENST00000233027 EPHB6O15197 1021 aa13.66□□□□□ -0.22
NEK4-201ENST00000233027 PHGDHO43175 533 aaKnown RBP13.66□□□□□ -0.22
NEK4-201ENST00000233027 PIAS1O75925 651 aa13.66□□□□□ -0.22
NEK4-201ENST00000233027 CHKAP35790 457 aa13.66□□□□□ -0.22
NEK4-201ENST00000233027 ARHGAP15Q53QZ3 475 aa13.66□□□□□ -0.22
NEK4-201ENST00000233027 MIIPQ5JXC2 388 aa13.66□□□□□ -0.22
NEK4-201ENST00000233027 KCNT2Q6UVM3 1135 aa13.66□□□□□ -0.22
NEK4-201ENST00000233027 PWWP2AQ96N64 755 aa13.66□□□□□ -0.22
NEK4-201ENST00000233027 ADGRE3Q9BY15 652 aa13.66□□□□□ -0.22
NEK4-201ENST00000233027 PARVBQ9HBI1 364 aa13.66□□□□□ -0.22
NEK4-201ENST00000233027 SH3BP4Q9P0V3 963 aa13.66□□□□□ -0.22
NEK4-201ENST00000233027 POLG2Q9UHN1 485 aa13.66□□□□□ -0.22
NEK4-201ENST00000233027 MYRFQ9Y2G1 1151 aa13.66□□□□□ -0.22
NEK4-201ENST00000233027 FEN1P39748 380 aaKnown RBP13.66□□□□□ -0.22
NEK4-201ENST00000233027 PPIDQ08752 370 aaKnown RBP13.66□□□□□ -0.22
NEK4-201ENST00000233027 RRP1BQ14684 758 aaKnown RBP13.66□□□□□ -0.22
NEK4-201ENST00000233027 CDHR5Q9HBB8 845 aa13.66□□□□□ -0.22
NEK4-201ENST00000233027 CELF2O95319 508 aaKnown RBP13.66□□□□□ -0.22
NEK4-201ENST00000233027 ME2P23368 584 aa13.66□□□□□ -0.22
NEK4-201ENST00000233027 MARC1Q5VT66 337 aa13.66□□□□□ -0.22
NEK4-201ENST00000233027 TSHZ1Q6ZSZ6 1077 aa13.66□□□□□ -0.22
NEK4-201ENST00000233027 KRT78Q8N1N4 520 aa13.66□□□□□ -0.22
NEK4-201ENST00000233027 LNX1Q8TBB1 728 aaPredicted RBP13.66□□□□□ -0.22
NEK4-201ENST00000233027 UBXN6Q9BZV1 441 aa13.66□□□□□ -0.22
NEK4-201ENST00000233027 NDEL1Q9GZM8 345 aa13.66□□□□□ -0.22
NEK4-201ENST00000233027 ZSCAN32Q9NX65 697 aa13.66□□□□□ -0.22
NEK4-201ENST00000233027 LMTK2Q8IWU2 1503 aa13.66□□□□□ -0.22
NEK4-201ENST00000233027 E5RJQ4 531 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 H7C4K7 107 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 WEE1P30291 646 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 KCNJ2P63252 427 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 SLC25A3Q00325 362 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 STK32CQ86UX6 486 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 DEFB106AQ8N104 65 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 FBXL16Q8N461 479 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 ZNF184Q99676 751 aaPredicted RBP13.65□□□□□ -0.22
NEK4-201ENST00000233027 HDHD2Q9H0R4 259 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 ETNK2Q9NVF9 386 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 TRPC4Q9UBN4 977 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 FRMPD4Q14CM0 1322 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 SNTNA6NMZ2 147 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 DSG3P32926 999 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 TUBP50607 506 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 RAD23AP54725 363 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 TMC7Q7Z402 723 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 CKAP2Q8WWK9 683 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 SYT15Q9BQS2 421 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 BDH2Q9BUT1 245 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 EPS8L2Q9H6S3 715 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 CRYL1Q9Y2S2 319 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 DIP2BQ9P265 1576 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 SH3BGRLO75368 114 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 CRABP2P29373 138 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 GCNT1Q02742 428 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms