RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 ANKRD33Q7Z3H0 272 aa25.65■■□□□ 1.7
RUNDC3A-201ENST00000225441 DIS3LQ8TF46 1054 aaKnown RBP25.65■■□□□ 1.7
RUNDC3A-201ENST00000225441 ZMAT2Q96NC0 199 aaKnown RBP25.65■■□□□ 1.7
RUNDC3A-201ENST00000225441 MIPEPQ99797 713 aa25.65■■□□□ 1.7
RUNDC3A-201ENST00000225441 C12orf65Q9H3J6 166 aaKnown RBP25.65■■□□□ 1.7
RUNDC3A-201ENST00000225441 SDAD1Q9NVU7 687 aaKnown RBP eCLIP25.65■■□□□ 1.7
RUNDC3A-201ENST00000225441 A8MXQ7 604 aa25.65■■□□□ 1.7
RUNDC3A-201ENST00000225441 GRAP2O75791 330 aa25.65■■□□□ 1.7
RUNDC3A-201ENST00000225441 ALDH1A2O94788 518 aa25.65■■□□□ 1.7
RUNDC3A-201ENST00000225441 GM2AP17900 193 aa25.65■■□□□ 1.7
RUNDC3A-201ENST00000225441 OCRLQ01968 901 aa25.65■■□□□ 1.7
RUNDC3A-201ENST00000225441 BST2Q10589 180 aaKnown RBP25.65■■□□□ 1.7
RUNDC3A-201ENST00000225441 RAB6CQ53S08 254 aa25.65■■□□□ 1.7
RUNDC3A-201ENST00000225441 STRADAQ7RTN6 431 aa25.65■■□□□ 1.7
RUNDC3A-201ENST00000225441 FERMT1Q9BQL6 677 aa25.65■■□□□ 1.7
RUNDC3A-201ENST00000225441 NAT9Q9BTE0 207 aa25.65■■□□□ 1.7
RUNDC3A-201ENST00000225441 RAB6CQ9H0N0 254 aa25.65■■□□□ 1.7
RUNDC3A-201ENST00000225441 MOCS1Q9NZB8 636 aa25.65■■□□□ 1.7
RUNDC3A-201ENST00000225441 KLK14Q9P0G3 267 aa25.65■■□□□ 1.7
RUNDC3A-201ENST00000225441 CXorf49A8MYA2 514 aaPredicted RBP25.64■■□□□ 1.7
RUNDC3A-201ENST00000225441 FCHO1O14526 889 aa25.64■■□□□ 1.7
RUNDC3A-201ENST00000225441 PPP1R12AO14974 1030 aaPredicted RBP25.64■■□□□ 1.7
RUNDC3A-201ENST00000225441 BCAT1P54687 386 aa25.64■■□□□ 1.7
RUNDC3A-201ENST00000225441 ZRSR2Q15696 482 aaKnown RBP25.64■■□□□ 1.7
RUNDC3A-201ENST00000225441 CA9Q16790 459 aa25.64■■□□□ 1.7
RUNDC3A-201ENST00000225441 NUDCD3Q8IVD9 361 aa25.64■■□□□ 1.7
RUNDC3A-201ENST00000225441 APLFQ8IW19 511 aaPredicted RBP25.64■■□□□ 1.7
RUNDC3A-201ENST00000225441 CRYBG2Q8N1P7 616 aa25.64■■□□□ 1.7
RUNDC3A-201ENST00000225441 C12orf29Q8N999 325 aa25.64■■□□□ 1.7
RUNDC3A-201ENST00000225441 ANKRD52Q8NB46 1076 aa25.64■■□□□ 1.7
RUNDC3A-201ENST00000225441 CCDC110Q8TBZ0 833 aa25.64■■□□□ 1.7
RUNDC3A-201ENST00000225441 MCUR1Q96AQ8 359 aa25.64■■□□□ 1.7
RUNDC3A-201ENST00000225441 HSFY1Q96LI6 401 aa25.64■■□□□ 1.7
RUNDC3A-201ENST00000225441 MRPL45Q9BRJ2 306 aaKnown RBP25.64■■□□□ 1.7
RUNDC3A-201ENST00000225441 STN1Q9H668 368 aaKnown RBP25.64■■□□□ 1.7
RUNDC3A-201ENST00000225441 ALG13Q9NP73 1137 aaKnown RBP25.64■■□□□ 1.7
RUNDC3A-201ENST00000225441 GPATCH2LQ9NWQ4 482 aa25.64■■□□□ 1.7
RUNDC3A-201ENST00000225441 PITPNM1O00562 1244 aa25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 MAGEC1O60732 1142 aa25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 SNNO75324 88 aaPredicted RBP25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 KCNE1P15382 129 aa25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 RAB27AP51159 221 aa25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 BLMHQ13867 455 aa25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 C1orf53Q5VUE5 145 aa25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 ZNF534Q76KX8 674 aa25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 MARK2Q7KZI7 788 aaKnown RBP25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 ACOT1Q86TX2 421 aa25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 CRLF3Q8IUI8 442 aa25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 TMEM130Q8N3G9 435 aa25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 NUMBLQ9Y6R0 609 aa25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 SF3B1O75533 1304 aaKnown RBP eCLIP25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 BPGMP07738 259 aa25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 ATP6V1C1P21283 382 aa25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 RAP1GDS1P52306 607 aa25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 MRPS5P82675 430 aaKnown RBP25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 TMPRSS15P98073 1019 aa25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 WASHC5Q12768 1159 aa25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 MTM1Q13496 603 aa25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 GLRA4Q5JXX5 417 aa25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 HEATR6Q6AI08 1181 aaKnown RBP25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 CDHR3Q6ZTQ4 885 aa25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 MRPL10Q7Z7H8 261 aaKnown RBP25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 SCUBE3Q8IX30 993 aa25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 TOX2Q96NM4 488 aa25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 ADAM2Q99965 735 aa25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 AP4E1Q9UPM8 1137 aa25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 SNX9Q9Y5X1 595 aa25.63■■□□□ 1.69
RUNDC3A-201ENST00000225441 SMIM28A0A1B0GU29 152 aa25.62■■□□□ 1.69
RUNDC3A-201ENST00000225441 ZNF623O75123 536 aa25.62■■□□□ 1.69
RUNDC3A-201ENST00000225441 DGKIO75912 1065 aa25.62■■□□□ 1.69
RUNDC3A-201ENST00000225441 STK10O94804 968 aaKnown RBP25.62■■□□□ 1.69
RUNDC3A-201ENST00000225441 ACADSP16219 412 aa25.62■■□□□ 1.69
RUNDC3A-201ENST00000225441 BST1Q10588 318 aa25.62■■□□□ 1.69
RUNDC3A-201ENST00000225441 TRIM60Q495X7 471 aa25.62■■□□□ 1.69
RUNDC3A-201ENST00000225441 TEX44Q53QW1 395 aa25.62■■□□□ 1.69
RUNDC3A-201ENST00000225441 TMPRSS6Q8IU80 811 aa25.62■■□□□ 1.69
RUNDC3A-201ENST00000225441 FAM96AQ9H5X1 160 aa25.62■■□□□ 1.69
RUNDC3A-201ENST00000225441 SMYD2Q9NRG4 433 aa25.62■■□□□ 1.69
RUNDC3A-201ENST00000225441 UBQLN1Q9UMX0 589 aaKnown RBP25.62■■□□□ 1.69
RUNDC3A-201ENST00000225441 A0A0A0MRY4 1105 aa25.61■■□□□ 1.69
RUNDC3A-201ENST00000225441 PIK3R2O00459 728 aa25.61■■□□□ 1.69
RUNDC3A-201ENST00000225441 METTL18O95568 372 aa25.61■■□□□ 1.69
RUNDC3A-201ENST00000225441 TLE2Q04725 743 aa25.61■■□□□ 1.69
RUNDC3A-201ENST00000225441 PPP6R3Q5H9R7 873 aaPredicted RBP25.61■■□□□ 1.69
RUNDC3A-201ENST00000225441 EFHC1Q5JVL4 640 aa25.61■■□□□ 1.69
RUNDC3A-201ENST00000225441 KCNT2Q6UVM3 1135 aa25.61■■□□□ 1.69
RUNDC3A-201ENST00000225441 LMNTD2Q8IXW0 634 aa25.61■■□□□ 1.69
RUNDC3A-201ENST00000225441 TFB1MQ8WVM0 346 aaKnown RBP25.61■■□□□ 1.69
RUNDC3A-201ENST00000225441 CDKL2Q92772 493 aa25.61■■□□□ 1.69
RUNDC3A-201ENST00000225441 SPATA13Q96N96 652 aa25.61■■□□□ 1.69
RUNDC3A-201ENST00000225441 OLFM3Q96PB7 478 aa25.61■■□□□ 1.69
RUNDC3A-201ENST00000225441 CSPG4P5Q96PW8 444 aa25.61■■□□□ 1.69
RUNDC3A-201ENST00000225441 DHX35Q9H5Z1 703 aaKnown RBP25.61■■□□□ 1.69
RUNDC3A-201ENST00000225441 THAP1Q9NVV9 213 aa25.61■■□□□ 1.69
RUNDC3A-201ENST00000225441 TAS2R1Q9NYW7 299 aa25.61■■□□□ 1.69
RUNDC3A-201ENST00000225441 TUBGCP4Q9UGJ1 667 aa25.61■■□□□ 1.69
RUNDC3A-201ENST00000225441 A0A0U1RQF3 1178 aa25.6■■□□□ 1.69
RUNDC3A-201ENST00000225441 CAPN14A8MX76 684 aa25.6■■□□□ 1.69
RUNDC3A-201ENST00000225441 F8W8V4 182 aa25.6■■□□□ 1.69
RUNDC3A-201ENST00000225441 CSH1P0DML2 217 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms