RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 NT5C3BQ969T7 300 aa22.85■■□□□ 1.25
CCDC9-201ENST00000221922 MTBPQ96DY7 904 aa22.85■■□□□ 1.25
CCDC9-201ENST00000221922 EBNA1BP2Q99848 306 aaKnown RBP22.85■■□□□ 1.25
CCDC9-201ENST00000221922 SIRPGQ9P1W8 387 aa22.85■■□□□ 1.25
CCDC9-201ENST00000221922 GABRQQ9UN88 632 aa22.85■■□□□ 1.25
CCDC9-201ENST00000221922 A0A0A0MRY4 1105 aa22.84■■□□□ 1.25
CCDC9-201ENST00000221922 FAM237BA0A1B0GVD1 139 aa22.84■■□□□ 1.25
CCDC9-201ENST00000221922 THP07101 528 aa22.84■■□□□ 1.25
CCDC9-201ENST00000221922 CDK18Q07002 472 aa22.84■■□□□ 1.25
CCDC9-201ENST00000221922 ZNF534Q76KX8 674 aa22.84■■□□□ 1.25
CCDC9-201ENST00000221922 TMEM86AQ8N2M4 240 aa22.84■■□□□ 1.25
CCDC9-201ENST00000221922 SIGLEC10Q96LC7 697 aa22.84■■□□□ 1.25
CCDC9-201ENST00000221922 SPATA13Q96N96 652 aa22.84■■□□□ 1.25
CCDC9-201ENST00000221922 NPY6RQ99463 290 aa22.84■■□□□ 1.25
CCDC9-201ENST00000221922 ARHGAP39Q9C0H5 1083 aa22.84■■□□□ 1.25
CCDC9-201ENST00000221922 GIT1Q9Y2X7 761 aa22.84■■□□□ 1.25
CCDC9-201ENST00000221922 I3L4J1 428 aa22.83■■□□□ 1.25
CCDC9-201ENST00000221922 GPR182O15218 404 aa22.83■■□□□ 1.25
CCDC9-201ENST00000221922 ADAMTS4O75173 837 aa22.83■■□□□ 1.25
CCDC9-201ENST00000221922 ZNF189O75820 626 aaPredicted RBP22.83■■□□□ 1.25
CCDC9-201ENST00000221922 CTSHP09668 335 aa22.83■■□□□ 1.25
CCDC9-201ENST00000221922 ESRRAP11474 423 aaPredicted RBP22.83■■□□□ 1.25
CCDC9-201ENST00000221922 PAX7P23759 505 aa22.83■■□□□ 1.25
CCDC9-201ENST00000221922 CDC25CP30307 473 aa22.83■■□□□ 1.25
CCDC9-201ENST00000221922 FLT3LGP49771 235 aa22.83■■□□□ 1.25
CCDC9-201ENST00000221922 FAM182AQ5T1J6 154 aa22.83■■□□□ 1.25
CCDC9-201ENST00000221922 UNC5AQ6ZN44 842 aa22.83■■□□□ 1.25
CCDC9-201ENST00000221922 PAQR9Q6ZVX9 377 aa22.83■■□□□ 1.25
CCDC9-201ENST00000221922 BNIPLQ7Z465 357 aa22.83■■□□□ 1.25
CCDC9-201ENST00000221922 LRRN4Q8WUT4 740 aa22.83■■□□□ 1.25
CCDC9-201ENST00000221922 SENP8Q96LD8 212 aa22.83■■□□□ 1.25
CCDC9-201ENST00000221922 GAD1Q99259 594 aa22.83■■□□□ 1.25
CCDC9-201ENST00000221922 MED10Q9BTT4 135 aa22.83■■□□□ 1.25
CCDC9-201ENST00000221922 MAGEB5Q9BZ81 275 aa22.83■■□□□ 1.25
CCDC9-201ENST00000221922 ARHGEF4Q9NR80 690 aa22.83■■□□□ 1.25
CCDC9-201ENST00000221922 STOML1Q9UBI4 398 aa22.83■■□□□ 1.25
CCDC9-201ENST00000221922 C2orf71A6NGG8 1288 aa22.83■■□□□ 1.24
CCDC9-201ENST00000221922 KRT38O76015 456 aa22.83■■□□□ 1.24
CCDC9-201ENST00000221922 FBXO21O94952 628 aa22.83■■□□□ 1.24
CCDC9-201ENST00000221922 FAM200BP0CF97 657 aa22.83■■□□□ 1.24
CCDC9-201ENST00000221922 MLNP12872 115 aa22.83■■□□□ 1.24
CCDC9-201ENST00000221922 BST1Q10588 318 aa22.83■■□□□ 1.24
CCDC9-201ENST00000221922 HSF5Q4G112 596 aaPredicted RBP22.83■■□□□ 1.24
CCDC9-201ENST00000221922 ATG16L1Q676U5 607 aa22.83■■□□□ 1.24
CCDC9-201ENST00000221922 MRPL10Q7Z7H8 261 aaKnown RBP22.83■■□□□ 1.24
CCDC9-201ENST00000221922 TTC7BQ86TV6 843 aa22.83■■□□□ 1.24
CCDC9-201ENST00000221922 PYROXD2Q8N2H3 581 aa22.83■■□□□ 1.24
CCDC9-201ENST00000221922 RAB3IL1Q8TBN0 382 aa22.83■■□□□ 1.24
CCDC9-201ENST00000221922 RNF139Q8WU17 664 aa22.83■■□□□ 1.24
CCDC9-201ENST00000221922 SLC2A13Q96QE2 648 aa22.83■■□□□ 1.24
CCDC9-201ENST00000221922 NMUR2Q9GZQ4 415 aa22.83■■□□□ 1.24
CCDC9-201ENST00000221922 MAD1L1Q9Y6D9 718 aa22.83■■□□□ 1.24
CCDC9-201ENST00000221922 A6NHS1 94 aa22.82■■□□□ 1.24
CCDC9-201ENST00000221922 FAM159BA6NKW6 160 aa22.82■■□□□ 1.24
CCDC9-201ENST00000221922 ACADSP16219 412 aa22.82■■□□□ 1.24
CCDC9-201ENST00000221922 ACAT1P24752 427 aaKnown RBP22.82■■□□□ 1.24
CCDC9-201ENST00000221922 LHX1P48742 406 aa22.82■■□□□ 1.24
CCDC9-201ENST00000221922 OCRLQ01968 901 aa22.82■■□□□ 1.24
CCDC9-201ENST00000221922 CLEC20AQ6ZU45 233 aa22.82■■□□□ 1.24
CCDC9-201ENST00000221922 E2F7Q96AV8 911 aa22.82■■□□□ 1.24
CCDC9-201ENST00000221922 PCDHA11Q9Y5I1 949 aa22.82■■□□□ 1.24
CCDC9-201ENST00000221922 CASP8AP2Q9UKL3 1982 aa22.82■■□□□ 1.24
CCDC9-201ENST00000221922 TSC2P49815 1807 aa22.82■■□□□ 1.24
CCDC9-201ENST00000221922 CAPN14A8MX76 684 aa22.81■■□□□ 1.24
CCDC9-201ENST00000221922 CLDN5O00501 218 aa22.81■■□□□ 1.24
CCDC9-201ENST00000221922 UGT1A9O60656 530 aa22.81■■□□□ 1.24
CCDC9-201ENST00000221922 OPHN1O60890 802 aa22.81■■□□□ 1.24
CCDC9-201ENST00000221922 CSH1P0DML2 217 aa22.81■■□□□ 1.24
CCDC9-201ENST00000221922 CSH2P0DML3 217 aa22.81■■□□□ 1.24
CCDC9-201ENST00000221922 AIF1P55008 147 aa22.81■■□□□ 1.24
CCDC9-201ENST00000221922 PDK1Q15118 436 aa22.81■■□□□ 1.24
CCDC9-201ENST00000221922 TEX44Q53QW1 395 aa22.81■■□□□ 1.24
CCDC9-201ENST00000221922 ACSBG2Q5FVE4 666 aa22.81■■□□□ 1.24
CCDC9-201ENST00000221922 MDH1BQ5I0G3 518 aa22.81■■□□□ 1.24
CCDC9-201ENST00000221922 OTUD1Q5VV17 481 aaPredicted RBP22.81■■□□□ 1.24
CCDC9-201ENST00000221922 MCUR1Q96AQ8 359 aa22.81■■□□□ 1.24
CCDC9-201ENST00000221922 MECRQ9BV79 373 aa22.81■■□□□ 1.24
CCDC9-201ENST00000221922 UGT1A7Q9HAW7 530 aa22.81■■□□□ 1.24
CCDC9-201ENST00000221922 UGT1A10Q9HAW8 530 aa22.81■■□□□ 1.24
CCDC9-201ENST00000221922 UGT1A8Q9HAW9 530 aa22.81■■□□□ 1.24
CCDC9-201ENST00000221922 EIF2B3Q9NR50 452 aaKnown RBP22.81■■□□□ 1.24
CCDC9-201ENST00000221922 DDX43Q9NXZ2 648 aaKnown RBP22.81■■□□□ 1.24
CCDC9-201ENST00000221922 ARL5CA6NH57 179 aa22.81■■□□□ 1.24
CCDC9-201ENST00000221922 M0QYT0 321 aa22.81■■□□□ 1.24
CCDC9-201ENST00000221922 VAV1P15498 845 aa22.81■■□□□ 1.24
CCDC9-201ENST00000221922 RPL9P32969 192 aaKnown RBP22.81■■□□□ 1.24
CCDC9-201ENST00000221922 CRHR1P34998 444 aa22.81■■□□□ 1.24
CCDC9-201ENST00000221922 SERPINB9P50453 376 aa22.81■■□□□ 1.24
CCDC9-201ENST00000221922 TSNAXIP1Q2TAA8 658 aa22.81■■□□□ 1.24
CCDC9-201ENST00000221922 KIAA0319Q5VV43 1072 aa22.81■■□□□ 1.24
CCDC9-201ENST00000221922 CES4AQ5XG92 561 aa22.81■■□□□ 1.24
CCDC9-201ENST00000221922 CYS1Q717R9 158 aa22.81■■□□□ 1.24
CCDC9-201ENST00000221922 ARMC2Q8NEN0 867 aa22.81■■□□□ 1.24
CCDC9-201ENST00000221922 DNAJC9Q8WXX5 260 aa22.81■■□□□ 1.24
CCDC9-201ENST00000221922 NDRG1Q92597 394 aaKnown RBP22.81■■□□□ 1.24
CCDC9-201ENST00000221922 SLC9A7Q96T83 725 aa22.81■■□□□ 1.24
CCDC9-201ENST00000221922 HMX2A2RU54 273 aa22.8■■□□□ 1.24
CCDC9-201ENST00000221922 MFSD11O43934 449 aa22.8■■□□□ 1.24
CCDC9-201ENST00000221922 IGFBP6P24592 240 aaPredicted RBP22.8■■□□□ 1.24
CCDC9-201ENST00000221922 GLUD2P49448 558 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms