RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 RTN3O95197 1032 aaPredicted RBP22.75■■□□□ 1.23
HTATSF1-201ENST00000218364 UQCRBP14927 111 aa22.75■■□□□ 1.23
HTATSF1-201ENST00000218364 GSTT1P30711 240 aa22.75■■□□□ 1.23
HTATSF1-201ENST00000218364 EPHB1P54762 984 aa22.75■■□□□ 1.23
HTATSF1-201ENST00000218364 CASC4Q6P4E1 433 aa22.75■■□□□ 1.23
HTATSF1-201ENST00000218364 SPATA33Q96N06 139 aa22.75■■□□□ 1.23
HTATSF1-201ENST00000218364 NAT9Q9BTE0 207 aa22.75■■□□□ 1.23
HTATSF1-201ENST00000218364 B3GNT5Q9BYG0 378 aa22.75■■□□□ 1.23
HTATSF1-201ENST00000218364 MAGEB5Q9BZ81 275 aa22.75■■□□□ 1.23
HTATSF1-201ENST00000218364 SPATC1LQ9H0A9 340 aa22.75■■□□□ 1.23
HTATSF1-201ENST00000218364 TMEM216Q9P0N5 145 aa22.75■■□□□ 1.23
HTATSF1-201ENST00000218364 POMPQ9Y244 141 aa22.75■■□□□ 1.23
HTATSF1-201ENST00000218364 PSAT1Q9Y617 370 aa22.75■■□□□ 1.23
HTATSF1-201ENST00000218364 USP3Q9Y6I4 520 aa22.75■■□□□ 1.23
HTATSF1-201ENST00000218364 RALBP11234 206 aa22.75■■□□□ 1.23
HTATSF1-201ENST00000218364 ITGAXP20702 1163 aa22.75■■□□□ 1.23
HTATSF1-201ENST00000218364 GRM2Q14416 872 aa22.75■■□□□ 1.23
HTATSF1-201ENST00000218364 CNPY1Q3B7I2 92 aa22.75■■□□□ 1.23
HTATSF1-201ENST00000218364 APOBEC3FQ8IUX4 373 aaKnown RBP22.75■■□□□ 1.23
HTATSF1-201ENST00000218364 ST13P4Q8IZP2 240 aaPredicted RBP22.75■■□□□ 1.23
HTATSF1-201ENST00000218364 CENPKQ9BS16 269 aa22.75■■□□□ 1.23
HTATSF1-201ENST00000218364 DMAP1Q9NPF5 467 aaPredicted RBP22.75■■□□□ 1.23
HTATSF1-201ENST00000218364 SLC4A7Q9Y6M7 1214 aa22.75■■□□□ 1.23
HTATSF1-201ENST00000218364 CASQ2O14958 399 aaPredicted RBP22.74■■□□□ 1.23
HTATSF1-201ENST00000218364 CRADDP78560 199 aa22.74■■□□□ 1.23
HTATSF1-201ENST00000218364 RSPH3Q86UC2 560 aa22.74■■□□□ 1.23
HTATSF1-201ENST00000218364 CPB2Q96IY4 423 aa22.74■■□□□ 1.23
HTATSF1-201ENST00000218364 SF3B1O75533 1304 aaKnown RBP eCLIP22.74■■□□□ 1.23
HTATSF1-201ENST00000218364 AP1G2O75843 785 aa22.74■■□□□ 1.23
HTATSF1-201ENST00000218364 MGAT1P26572 445 aa22.74■■□□□ 1.23
HTATSF1-201ENST00000218364 ATXN1P54253 815 aaKnown RBP22.74■■□□□ 1.23
HTATSF1-201ENST00000218364 MED21Q13503 144 aa22.74■■□□□ 1.23
HTATSF1-201ENST00000218364 SLC26A9Q7LBE3 791 aa22.74■■□□□ 1.23
HTATSF1-201ENST00000218364 ACOT1Q86TX2 421 aa22.74■■□□□ 1.23
HTATSF1-201ENST00000218364 COLGALT1Q8NBJ5 622 aa22.74■■□□□ 1.23
HTATSF1-201ENST00000218364 ETAA1Q9NY74 926 aa22.74■■□□□ 1.23
HTATSF1-201ENST00000218364 PEX1O43933 1283 aa22.73■■□□□ 1.23
HTATSF1-201ENST00000218364 PDE5AO76074 875 aa22.73■■□□□ 1.23
HTATSF1-201ENST00000218364 SORBS2O94875 1100 aaKnown RBP22.73■■□□□ 1.23
HTATSF1-201ENST00000218364 ARF4P18085 180 aaPredicted RBP22.73■■□□□ 1.23
HTATSF1-201ENST00000218364 DYNC1I2Q13409 638 aaKnown RBP22.73■■□□□ 1.23
HTATSF1-201ENST00000218364 LPCAT4Q643R3 524 aa22.73■■□□□ 1.23
HTATSF1-201ENST00000218364 GDPD5Q8WTR4 605 aa22.73■■□□□ 1.23
HTATSF1-201ENST00000218364 ISL2Q96A47 359 aa22.73■■□□□ 1.23
HTATSF1-201ENST00000218364 MRPL45Q9BRJ2 306 aaKnown RBP22.73■■□□□ 1.23
HTATSF1-201ENST00000218364 SYT17Q9BSW7 474 aa22.73■■□□□ 1.23
HTATSF1-201ENST00000218364 A0A087WZ62 844 aa22.73■■□□□ 1.23
HTATSF1-201ENST00000218364 MX2P20592 715 aa22.73■■□□□ 1.23
HTATSF1-201ENST00000218364 SCNN1AP37088 669 aa22.73■■□□□ 1.23
HTATSF1-201ENST00000218364 MAGEA12P43365 314 aa22.73■■□□□ 1.23
HTATSF1-201ENST00000218364 RASIP1Q5U651 963 aa22.73■■□□□ 1.23
HTATSF1-201ENST00000218364 FBXW8Q8N3Y1 598 aa22.73■■□□□ 1.23
HTATSF1-201ENST00000218364 FDXACB1Q9BRP7 624 aaPredicted RBP22.73■■□□□ 1.23
HTATSF1-201ENST00000218364 NR2E3Q9Y5X4 410 aa22.73■■□□□ 1.23
HTATSF1-201ENST00000218364 KLHL33A6NCF5 533 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 CCDC153Q494R4 210 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 PPM1JQ5JR12 505 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 MAP3K21Q5TCX8 1036 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 DEFB107AQ8IZN7 70 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 MPHOSPH6Q99547 160 aaKnown RBP22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 FAM49BQ9NUQ9 324 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 GGA3Q9NZ52 723 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 MFHAS1Q9Y4C4 1052 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 NME7Q9Y5B8 376 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 PCDHB12Q9Y5F1 795 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 UTRNP46939 3433 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 NFKBIEO00221 500 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 GP5P40197 560 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 SESN2P58004 480 aaPredicted RBP22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 VWA5B1Q5TIE3 1220 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 FRMD7Q6ZUT3 714 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 CCDC185Q8N715 623 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 PRDM16Q9HAZ2 1276 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 SSX2IPQ9Y2D8 614 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 OPHN1O60890 802 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 CCDC130P13994 396 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 CPA3P15088 417 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 VCLP18206 1134 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 ACAT1P24752 427 aaKnown RBP22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 PEX2P28328 305 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 TYK2P29597 1187 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 MTTPP55157 894 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 CFAP157Q5JU67 520 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 ARHGAP17Q68EM7 881 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 EPGNQ6UW88 154 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 KBTBD6Q86V97 674 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 LINC01465Q8N7H1 131 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 RNPEPQ9H4A4 650 aa22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 RCOR3Q9P2K3 495 aaPredicted RBP22.72■■□□□ 1.23
HTATSF1-201ENST00000218364 ADCY6O43306 1168 aa22.71■■□□□ 1.23
HTATSF1-201ENST00000218364 GARSP41250 739 aaKnown RBP22.71■■□□□ 1.23
HTATSF1-201ENST00000218364 AQP4P55087 323 aa22.71■■□□□ 1.23
HTATSF1-201ENST00000218364 ITGA9Q13797 1035 aa22.71■■□□□ 1.23
HTATSF1-201ENST00000218364 LRRC36Q1X8D7 754 aa22.71■■□□□ 1.23
HTATSF1-201ENST00000218364 FSCBQ5H9T9 825 aa22.71■■□□□ 1.23
HTATSF1-201ENST00000218364 GRTP1Q5TC63 336 aa22.71■■□□□ 1.23
HTATSF1-201ENST00000218364 PHTF2Q8N3S3 785 aa22.71■■□□□ 1.23
HTATSF1-201ENST00000218364 LGMNQ99538 433 aa22.71■■□□□ 1.23
HTATSF1-201ENST00000218364 ARHGAP26Q9UNA1 814 aa22.71■■□□□ 1.23
HTATSF1-201ENST00000218364 H3BNX3 289 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms