RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 CHN1P15882 459 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 POU6F1Q14863 301 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 SH3D19Q5HYK7 790 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 PIGZQ86VD9 579 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 OR6K2Q8NGY2 324 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 NSMCE4AQ9NXX6 385 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 GMIPQ9P107 970 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 SEPT3Q9UH03 358 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 LOC102724159A0A0B4J2E5 919 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 PWP2Q15269 919 aaKnown RBP14.09□□□□□ -0.15
SIX4-201ENST00000216513 CHST9Q7L1S5 443 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 MIER2Q8N344 545 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 ARL14EPQ8N8R7 260 aaPredicted RBP14.09□□□□□ -0.15
SIX4-201ENST00000216513 C12orf29Q8N999 325 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 CEP70Q8NHQ1 597 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 MAGED4Q96JG8 741 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 TRIM55Q9BYV6 548 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 TBC1D13Q9NVG8 400 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 ZNF214Q9UL59 606 aaPredicted RBP14.09□□□□□ -0.15
SIX4-201ENST00000216513 TPH1P17752 444 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 MMP13P45452 471 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 PMS1P54277 932 aaKnown RBP14.09□□□□□ -0.15
SIX4-201ENST00000216513 DLG4P78352 724 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 UBE3AQ05086 875 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 C6orf10Q5SRN2 563 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 CAMKK1Q8N5S9 505 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 TC2NQ8N9U0 490 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 POF1BQ8WVV4 589 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 NR1H4Q96RI1 486 aaPredicted RBP14.09□□□□□ -0.15
SIX4-201ENST00000216513 NEUROG2Q9H2A3 272 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 TMEM161AQ9NX61 479 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 C2CD2Q9Y426 696 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 TARSL2A2RTX5 802 aaKnown RBP14.09□□□□□ -0.15
SIX4-201ENST00000216513 PPP1R11O60927 126 aaPredicted RBP14.09□□□□□ -0.15
SIX4-201ENST00000216513 PAX3P23760 479 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 GPC1P35052 558 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 SPRP35270 261 aaPredicted RBP14.09□□□□□ -0.15
SIX4-201ENST00000216513 VARS2Q5ST30 1063 aaKnown RBP14.09□□□□□ -0.15
SIX4-201ENST00000216513 SPATA20Q8TB22 786 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 OTUB1Q96FW1 271 aaPredicted RBP14.09□□□□□ -0.15
SIX4-201ENST00000216513 YIPF3Q9GZM5 350 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 DNAJC18Q9H819 358 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 ARHGAP26Q9UNA1 814 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 RPS6KL1Q9Y6S9 549 aa14.09□□□□□ -0.15
SIX4-201ENST00000216513 A0A1B0GTH6 734 aa14.08□□□□□ -0.15
SIX4-201ENST00000216513 HMGB1P1B2RPK0 211 aaPredicted RBP14.08□□□□□ -0.15
SIX4-201ENST00000216513 GUCA1CO95843 209 aa14.08□□□□□ -0.15
SIX4-201ENST00000216513 SEC24CP53992 1094 aa14.08□□□□□ -0.15
SIX4-201ENST00000216513 TERF2Q15554 542 aa14.08□□□□□ -0.15
SIX4-201ENST00000216513 PRPF39Q86UA1 669 aaKnown RBP14.08□□□□□ -0.15
SIX4-201ENST00000216513 FAM35AQ86V20 835 aa14.08□□□□□ -0.15
SIX4-201ENST00000216513 IARS2Q9NSE4 1012 aaKnown RBP14.08□□□□□ -0.15
SIX4-201ENST00000216513 CACNB4O00305 520 aaPredicted RBP14.08□□□□□ -0.16
SIX4-201ENST00000216513 NCALDP61601 193 aa14.08□□□□□ -0.16
SIX4-201ENST00000216513 HLA-DQA1Q5Y7H0 255 aa14.08□□□□□ -0.16
SIX4-201ENST00000216513 STAMBPL1Q96FJ0 436 aa14.08□□□□□ -0.16
SIX4-201ENST00000216513 EXOC2Q96KP1 924 aa14.08□□□□□ -0.16
SIX4-201ENST00000216513 FAM187AA6NFU0 413 aa14.08□□□□□ -0.16
SIX4-201ENST00000216513 HNRNPCL2B2RXH8 293 aa14.08□□□□□ -0.16
SIX4-201ENST00000216513 PDE2AO00408 941 aaPredicted RBP14.08□□□□□ -0.16
SIX4-201ENST00000216513 HNRNPCL1O60812 293 aaKnown RBP14.08□□□□□ -0.16
SIX4-201ENST00000216513 PHF2O75151 1096 aa14.08□□□□□ -0.16
SIX4-201ENST00000216513 TGM3Q08188 693 aa14.08□□□□□ -0.16
SIX4-201ENST00000216513 EFTUD2Q15029 972 aaKnown RBP eCLIP14.08□□□□□ -0.16
SIX4-201ENST00000216513 RBM15Q96T37 977 aaKnown RBP eCLIP14.08□□□□□ -0.162e-7■■■■■ 29.1
SIX4-201ENST00000216513 TIE1P35590 1138 aa14.08□□□□□ -0.16
SIX4-201ENST00000216513 MROH9Q5TGP6 573 aa14.08□□□□□ -0.16
SIX4-201ENST00000216513 TRMT61BQ9BVS5 477 aaKnown RBP14.08□□□□□ -0.16
SIX4-201ENST00000216513 WDR41Q9HAD4 459 aa14.08□□□□□ -0.16
SIX4-201ENST00000216513 ETNK1Q9HBU6 452 aa14.08□□□□□ -0.16
SIX4-201ENST00000216513 SSU72P8A0A1W2PR75 194 aa14.08□□□□□ -0.16
SIX4-201ENST00000216513 DHX34Q14147 1143 aaKnown RBP14.08□□□□□ -0.16
SIX4-201ENST00000216513 NR1I3Q14994 352 aa14.08□□□□□ -0.16
SIX4-201ENST00000216513 ASPSCR1Q9BZE9 553 aa14.08□□□□□ -0.16
SIX4-201ENST00000216513 TXLNGQ9NUQ3 528 aa14.08□□□□□ -0.16
SIX4-201ENST00000216513 OR12D3Q9UGF7 316 aa14.08□□□□□ -0.16
SIX4-201ENST00000216513 CASZ1Q86V15 1759 aa14.08□□□□□ -0.16
SIX4-201ENST00000216513 CYP3A7-CYP3A51PA0A087WV96 503 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 A0A1W2PRU2 124 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 GSAPA4D1B5 854 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 AP5Z1O43299 807 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 CYP3A7P24462 503 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 CORO1AP31146 461 aaKnown RBP14.07□□□□□ -0.16
SIX4-201ENST00000216513 OTOAQ7RTW8 1153 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 DEFB119Q8N690 84 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 LRRN4CLQ8ND94 238 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 KIAA1522Q9P206 1035 aaPredicted RBP14.07□□□□□ -0.16
SIX4-201ENST00000216513 OR56A5P0C7T3 313 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 SMARCB1Q12824 385 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 ECHDC2Q86YB7 292 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 TOP6BLQ8N6T0 577 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 KIAA0895Q8NCT3 520 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 FAM84AQ96KN4 292 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 ATP13A3Q9H7F0 1226 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 TRBV23OR9-2A0A075B6M9 112 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 FGF18O76093 207 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 ALKBH2Q6NS38 261 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 DENND1BQ6P3S1 775 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 MCOLN3Q8TDD5 553 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 DTNAQ9Y4J8 743 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms