RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 CAMK1GQ96NX5 476 aa22.98■■□□□ 1.27
VTI1B-201ENST00000216456 WASF3Q9UPY6 502 aa22.98■■□□□ 1.27
VTI1B-201ENST00000216456 SPEGQ15772 3267 aa22.98■■□□□ 1.27
VTI1B-201ENST00000216456 NUMA1Q14980 2115 aa22.97■■□□□ 1.27
VTI1B-201ENST00000216456 TIMM44O43615 452 aa22.97■■□□□ 1.27
VTI1B-201ENST00000216456 CEACAM1P13688 526 aa22.97■■□□□ 1.27
VTI1B-201ENST00000216456 RING1Q06587 406 aa22.97■■□□□ 1.27
VTI1B-201ENST00000216456 ST3GAL2Q16842 350 aa22.97■■□□□ 1.27
VTI1B-201ENST00000216456 ZC3H12AQ5D1E8 599 aaKnown RBP22.97■■□□□ 1.27
VTI1B-201ENST00000216456 DCAF12L1Q5VU92 463 aa22.97■■□□□ 1.27
VTI1B-201ENST00000216456 MFN1Q8IWA4 741 aa22.97■■□□□ 1.27
VTI1B-201ENST00000216456 AHI1Q8N157 1196 aa22.97■■□□□ 1.27
VTI1B-201ENST00000216456 CARNMT1Q8N4J0 409 aa22.97■■□□□ 1.27
VTI1B-201ENST00000216456 WFIKKN2Q8TEU8 576 aa22.97■■□□□ 1.27
VTI1B-201ENST00000216456 MYO19Q96H55 970 aa22.97■■□□□ 1.27
VTI1B-201ENST00000216456 SIX2Q9NPC8 291 aa22.97■■□□□ 1.27
VTI1B-201ENST00000216456 PRSS16Q9NQE7 514 aa22.97■■□□□ 1.27
VTI1B-201ENST00000216456 PLA2G4CQ9UP65 541 aa22.97■■□□□ 1.27
VTI1B-201ENST00000216456 ASPMQ8IZT6 3477 aa22.96■■□□□ 1.27
VTI1B-201ENST00000216456 ACADMP11310 421 aa22.96■■□□□ 1.27
VTI1B-201ENST00000216456 CD59P13987 128 aa22.96■■□□□ 1.27
VTI1B-201ENST00000216456 PON1P27169 355 aa22.96■■□□□ 1.27
VTI1B-201ENST00000216456 ACSL1P33121 698 aa22.96■■□□□ 1.27
VTI1B-201ENST00000216456 DPP6P42658 865 aa22.96■■□□□ 1.27
VTI1B-201ENST00000216456 CTSOP43234 321 aaPredicted RBP22.96■■□□□ 1.27
VTI1B-201ENST00000216456 ZNF445P59923 1031 aa22.96■■□□□ 1.27
VTI1B-201ENST00000216456 PDCLQ13371 301 aa22.96■■□□□ 1.27
VTI1B-201ENST00000216456 DCAF6Q58WW2 860 aa22.96■■□□□ 1.27
VTI1B-201ENST00000216456 MS4A13Q5J8X5 152 aa22.96■■□□□ 1.27
VTI1B-201ENST00000216456 RAP1GAP2Q684P5 730 aa22.96■■□□□ 1.27
VTI1B-201ENST00000216456 FOXJ1Q92949 421 aa22.96■■□□□ 1.27
VTI1B-201ENST00000216456 SERPINB11Q96P15 392 aa22.96■■□□□ 1.27
VTI1B-201ENST00000216456 C6orf106Q9H6K1 298 aaPredicted RBP22.96■■□□□ 1.27
VTI1B-201ENST00000216456 EIF2B4Q9UI10 523 aaKnown RBP22.96■■□□□ 1.27
VTI1B-201ENST00000216456 TLR6Q9Y2C9 796 aa22.96■■□□□ 1.27
VTI1B-201ENST00000216456 USP24Q9UPU5 2620 aa22.96■■□□□ 1.27
VTI1B-201ENST00000216456 ZFHX4Q86UP3 3567 aa22.96■■□□□ 1.27
VTI1B-201ENST00000216456 SYNJ2BP-COX16A0A087WUM0 186 aa22.95■■□□□ 1.26
VTI1B-201ENST00000216456 C1QTNF9BB2RNN3 333 aa22.95■■□□□ 1.26
VTI1B-201ENST00000216456 GRAP2O75791 330 aa22.95■■□□□ 1.26
VTI1B-201ENST00000216456 FGFR1OPO95684 399 aaKnown RBP22.95■■□□□ 1.26
VTI1B-201ENST00000216456 DLDP09622 509 aaKnown RBP22.95■■□□□ 1.26
VTI1B-201ENST00000216456 C1QTNF9P0C862 333 aa22.95■■□□□ 1.26
VTI1B-201ENST00000216456 CSKP41240 450 aa22.95■■□□□ 1.26
VTI1B-201ENST00000216456 RPS14P62263 151 aaKnown RBP22.95■■□□□ 1.26
VTI1B-201ENST00000216456 BNC1Q01954 994 aa22.95■■□□□ 1.26
VTI1B-201ENST00000216456 GRIK2Q13002 908 aa22.95■■□□□ 1.26
VTI1B-201ENST00000216456 SYCP2LQ5T4T6 812 aa22.95■■□□□ 1.26
VTI1B-201ENST00000216456 GBP6Q6ZN66 633 aa22.95■■□□□ 1.26
VTI1B-201ENST00000216456 TMEM110Q86TL2 294 aa22.95■■□□□ 1.26
VTI1B-201ENST00000216456 CIR1Q86X95 450 aaPredicted RBP22.95■■□□□ 1.26
VTI1B-201ENST00000216456 LGI2Q8N0V4 545 aa22.95■■□□□ 1.26
VTI1B-201ENST00000216456 HJURPQ8NCD3 748 aaPredicted RBP22.95■■□□□ 1.26
VTI1B-201ENST00000216456 DNASE2BQ8WZ79 361 aa22.95■■□□□ 1.26
VTI1B-201ENST00000216456 CPXM1Q96SM3 734 aa22.95■■□□□ 1.26
VTI1B-201ENST00000216456 LHX5Q9H2C1 402 aa22.95■■□□□ 1.26
VTI1B-201ENST00000216456 IL21RQ9HBE5 538 aa22.95■■□□□ 1.26
VTI1B-201ENST00000216456 PLCB1Q9NQ66 1216 aa22.95■■□□□ 1.26
VTI1B-201ENST00000216456 COX16Q9P0S2 106 aa22.95■■□□□ 1.26
VTI1B-201ENST00000216456 APEX2Q9UBZ4 518 aa22.95■■□□□ 1.26
VTI1B-201ENST00000216456 AKAP13Q12802 2813 aa22.94■■□□□ 1.26
VTI1B-201ENST00000216456 METTL12A8MUP2 240 aa22.94■■□□□ 1.26
VTI1B-201ENST00000216456 CAPN9O14815 690 aa22.94■■□□□ 1.26
VTI1B-201ENST00000216456 OPHN1O60890 802 aa22.94■■□□□ 1.26
VTI1B-201ENST00000216456 TRUB2O95900 331 aaKnown RBP22.94■■□□□ 1.26
VTI1B-201ENST00000216456 IGLV3-19P01714 112 aa22.94■■□□□ 1.26
VTI1B-201ENST00000216456 POLR2EP19388 210 aaKnown RBP22.94■■□□□ 1.26
VTI1B-201ENST00000216456 ACADSBP45954 432 aa22.94■■□□□ 1.26
VTI1B-201ENST00000216456 MTIF2P46199 727 aaKnown RBP22.94■■□□□ 1.26
VTI1B-201ENST00000216456 WDR45BQ5MNZ6 344 aa22.94■■□□□ 1.26
VTI1B-201ENST00000216456 MPP7Q5T2T1 576 aa22.94■■□□□ 1.26
VTI1B-201ENST00000216456 HDDC3Q8N4P3 179 aa22.94■■□□□ 1.26
VTI1B-201ENST00000216456 FIBINQ8TAL6 211 aa22.94■■□□□ 1.26
VTI1B-201ENST00000216456 AZIN2Q96A70 460 aa22.94■■□□□ 1.26
VTI1B-201ENST00000216456 MRGPRX3Q96LB0 322 aa22.94■■□□□ 1.26
VTI1B-201ENST00000216456 IRAK2O43187 625 aa22.93■■□□□ 1.26
VTI1B-201ENST00000216456 MED7O43513 233 aa22.93■■□□□ 1.26
VTI1B-201ENST00000216456 GJB3O75712 270 aa22.93■■□□□ 1.26
VTI1B-201ENST00000216456 IGLV3-25P01717 112 aa22.93■■□□□ 1.26
VTI1B-201ENST00000216456 SIM1P81133 766 aaPredicted RBP22.93■■□□□ 1.26
VTI1B-201ENST00000216456 EXOC3L4Q17RC7 722 aa22.93■■□□□ 1.26
VTI1B-201ENST00000216456 DPCR1Q3MIW9 517 aa22.93■■□□□ 1.26
VTI1B-201ENST00000216456 LAYNQ6UX15 382 aa22.93■■□□□ 1.26
VTI1B-201ENST00000216456 APCDD1Q8J025 514 aa22.93■■□□□ 1.26
VTI1B-201ENST00000216456 C1orf131Q8NDD1 294 aaKnown RBP22.93■■□□□ 1.26
VTI1B-201ENST00000216456 STK32AQ8WU08 396 aa22.93■■□□□ 1.26
VTI1B-201ENST00000216456 SHC3Q92529 594 aa22.93■■□□□ 1.26
VTI1B-201ENST00000216456 SNX19Q92543 992 aa22.93■■□□□ 1.26
VTI1B-201ENST00000216456 NUP58Q9BVL2 599 aa22.93■■□□□ 1.26
VTI1B-201ENST00000216456 POPDC2Q9HBU9 364 aa22.93■■□□□ 1.26
VTI1B-201ENST00000216456 HYAL3O43820 417 aaPredicted RBP22.92■■□□□ 1.26
VTI1B-201ENST00000216456 SH3BP5O60239 455 aa22.92■■□□□ 1.26
VTI1B-201ENST00000216456 TACR2P21452 398 aa22.92■■□□□ 1.26
VTI1B-201ENST00000216456 OXTRP30559 389 aa22.92■■□□□ 1.26
VTI1B-201ENST00000216456 YWHAZP63104 245 aaKnown RBP22.92■■□□□ 1.26
VTI1B-201ENST00000216456 PITRM1Q5JRX3 1037 aa22.92■■□□□ 1.26
VTI1B-201ENST00000216456 DPY19L2P1Q6NXN4 242 aa22.92■■□□□ 1.26
VTI1B-201ENST00000216456 ENOSF1Q7L5Y1 443 aa22.92■■□□□ 1.26
VTI1B-201ENST00000216456 CHSY1Q86X52 802 aa22.92■■□□□ 1.26
VTI1B-201ENST00000216456 DHX40Q8IX18 779 aaKnown RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms