RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 ZNF572Q7Z3I7 529 aaPredicted RBP12.44□□□□□ -0.42
TSPAN9-201ENST00000011898 FITM2Q8N6M3 262 aa12.44□□□□□ -0.42
TSPAN9-201ENST00000011898 ZNF75CPQ92670 426 aaPredicted RBP12.44□□□□□ -0.42
TSPAN9-201ENST00000011898 NCLNQ969V3 563 aa12.44□□□□□ -0.42
TSPAN9-201ENST00000011898 TMEM176AQ96HP8 235 aa12.44□□□□□ -0.42
TSPAN9-201ENST00000011898 DENND2DQ9H6A0 471 aaPredicted RBP12.44□□□□□ -0.42
TSPAN9-201ENST00000011898 DPP3Q9NY33 737 aa12.44□□□□□ -0.42
TSPAN9-201ENST00000011898 RSL24D1Q9UHA3 163 aaKnown RBP12.44□□□□□ -0.42
TSPAN9-201ENST00000011898 C3orf70A6NLC5 250 aaPredicted RBP12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 USP1O94782 785 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 ASMTLO95671 621 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 ALBP02768 609 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 STAG3L1P0CL83 205 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 TMTC4Q5T4D3 741 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 BRSK2Q8IWQ3 736 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 DIS3LQ8TF46 1054 aaKnown RBP12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 GTF3C2Q8WUA4 911 aaPredicted RBP12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 COX4I2Q96KJ9 171 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 LMCD1Q9NZU5 365 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 V9GYQ6 96 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 GOLGA8CPA6NN73 597 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 RGS5O15539 181 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 SLC25A27O95847 323 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 LINGO3P0C6S8 592 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 HLA-DPA1P20036 260 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 HSD17B4P51659 736 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 CNTN2Q02246 1040 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 BNIP1Q12981 228 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 PARP6Q2NL67 630 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 C4orf22Q6V702 233 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 ZPBP2Q6X784 338 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 TSPAN14Q8NG11 270 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 PAWRQ96IZ0 340 aaKnown RBP12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 C12orf42Q96LP6 360 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 CHID1Q9BWS9 393 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 SPATA16Q9BXB7 569 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 UBE2OQ9C0C9 1292 aaKnown RBP12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 CEP44Q9C0F1 390 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 TASP1Q9H6P5 420 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 IPPQ9Y573 584 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 DYNC1LI2O43237 492 aaPredicted RBP12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 EIF4BP23588 611 aaKnown RBP12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 GNL1P36915 607 aaPredicted RBP12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 PDK2Q15119 407 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 UGCGQ16739 394 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 HDDC2Q7Z4H3 204 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 NUP93Q8N1F7 819 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 EXOSC4Q9NPD3 245 aaKnown RBP12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 TIMMDC1Q9NPL8 285 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 KIAA1257Q9ULG3 409 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 ITM2BQ9Y287 266 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 WDR90Q96KV7 1748 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 DFFAO00273 331 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 EEF2KO00418 725 aaKnown RBP12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 GH1P01241 217 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 DSG3P32926 999 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 RPA3P35244 121 aaPredicted RBP12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 SPIDRQ14159 915 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 NRF1Q16656 503 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 METTL7BQ6UX53 244 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 SLFN11Q7Z7L1 901 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 SKA2Q8WVK7 121 aaPredicted RBP12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 TFB1MQ8WVM0 346 aaKnown RBP12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 PHF12Q96QT6 1004 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 PLEKHA5Q9HAU0 1116 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 TRPC7Q9HCX4 862 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 CIDEBQ9UHD4 219 aa12.43□□□□□ -0.42
TSPAN9-201ENST00000011898 ATP8B3O60423 1300 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 IGLV3-22A0A075B6J6 115 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 KBTBD13C9JR72 458 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 WFS1O76024 890 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 GSNP06396 782 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 TPBGLP0DKB5 382 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 MIPP30301 263 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 SLC45A4Q5BKX6 768 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 CEP78Q5JTW2 689 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 RNF43Q68DV7 783 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 RIPOR1Q6ZS17 1223 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 HMG20AQ9NP66 347 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 SUN2Q9UH99 717 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 MYH10P35580 1976 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 TDRD10Q5VZ19 366 aaKnown RBP12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 FAM131BQ86XD5 332 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 C12orf56Q8IXR9 622 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 ASAP3Q8TDY4 903 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 SH3TC2Q8TF17 1288 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 CHEK2O96017 543 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 NELFEP18615 380 aaKnown RBP12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 ACADSBP45954 432 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 ARHGDIAP52565 204 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 TAS2R40P59535 323 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 NFIL3Q16649 462 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 DENND5BQ6ZUT9 1274 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 ZSWIM2Q8NEG5 633 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 SLC7A14Q8TBB6 771 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 REXO4Q9GZR2 422 aaKnown RBP12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 SIX2Q9NPC8 291 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 ZNF232Q9UNY5 417 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 COQ6Q9Y2Z9 468 aa12.42□□□□□ -0.42
TSPAN9-201ENST00000011898 PCDHGA3Q9Y5H0 932 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms