RNA–Protein interactions for RNA: ENST00000006015.3

HOXA11-201, Transcript of homeobox A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA11, Length 2,295 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-201ENST00000006015 TRMT10BQ6PF06 316 aaKnown RBP20.22■□□□□ 0.83
HOXA11-201ENST00000006015 ZBTB33Q86T24 672 aa20.22■□□□□ 0.83
HOXA11-201ENST00000006015 BIRC8Q96P09 236 aa20.22■□□□□ 0.83
HOXA11-201ENST00000006015 TMEM165Q9HC07 324 aa20.22■□□□□ 0.83
HOXA11-201ENST00000006015 MYOCOSA0A1B0GUC4 107 aa20.21■□□□□ 0.83
HOXA11-201ENST00000006015 TMEM221A6NGB7 291 aa20.21■□□□□ 0.83
HOXA11-201ENST00000006015 MAGEB3O15480 346 aa20.21■□□□□ 0.83
HOXA11-201ENST00000006015 LDHAP00338 332 aaKnown RBP20.21■□□□□ 0.83
HOXA11-201ENST00000006015 ICAM3P32942 547 aa20.21■□□□□ 0.83
HOXA11-201ENST00000006015 TNFSF9P41273 254 aa20.21■□□□□ 0.83
HOXA11-201ENST00000006015 KLF10Q13118 480 aa20.21■□□□□ 0.83
HOXA11-201ENST00000006015 CAPSQ13938 189 aa20.21■□□□□ 0.83
HOXA11-201ENST00000006015 NOL9Q5SY16 702 aaKnown RBP20.21■□□□□ 0.83
HOXA11-201ENST00000006015 C6orf52Q5T4I8 152 aa20.21■□□□□ 0.83
HOXA11-201ENST00000006015 C16orf89Q6UX73 402 aa20.21■□□□□ 0.83
HOXA11-201ENST00000006015 TRIM50Q86XT4 487 aa20.21■□□□□ 0.83
HOXA11-201ENST00000006015 MCUQ8NE86 351 aa20.21■□□□□ 0.83
HOXA11-201ENST00000006015 CHST13Q8NET6 341 aa20.21■□□□□ 0.83
HOXA11-201ENST00000006015 DNERQ8NFT8 737 aa20.21■□□□□ 0.83
HOXA11-201ENST00000006015 ATP2A3Q93084 1043 aa20.21■□□□□ 0.83
HOXA11-201ENST00000006015 SGIP1Q9BQI5 828 aa20.21■□□□□ 0.83
HOXA11-201ENST00000006015 SLC2A11Q9BYW1 496 aa20.21■□□□□ 0.83
HOXA11-201ENST00000006015 PAIP2BQ9ULR5 123 aaKnown RBP20.21■□□□□ 0.83
HOXA11-201ENST00000006015 FAF1Q9UNN5 650 aaPredicted RBP20.21■□□□□ 0.83
HOXA11-201ENST00000006015 KCNN4O15554 427 aa20.2■□□□□ 0.82
HOXA11-201ENST00000006015 DDNO94850 711 aaPredicted RBP20.2■□□□□ 0.82
HOXA11-201ENST00000006015 ASS1P00966 412 aaKnown RBP20.2■□□□□ 0.82
HOXA11-201ENST00000006015 PGK2P07205 417 aa20.2■□□□□ 0.82
HOXA11-201ENST00000006015 ZNF23P17027 643 aa20.2■□□□□ 0.82
HOXA11-201ENST00000006015 MIPP30301 263 aa20.2■□□□□ 0.82
HOXA11-201ENST00000006015 NAMPTP43490 491 aa20.2■□□□□ 0.82
HOXA11-201ENST00000006015 CDK9P50750 372 aaKnown RBP20.2■□□□□ 0.82
HOXA11-201ENST00000006015 MRPS22P82650 360 aaKnown RBP20.2■□□□□ 0.82
HOXA11-201ENST00000006015 FLOT2Q14254 428 aa20.2■□□□□ 0.82
HOXA11-201ENST00000006015 TAF5Q15542 800 aa20.2■□□□□ 0.82
HOXA11-201ENST00000006015 DHRS4L2Q6PKH6 230 aa20.2■□□□□ 0.82
HOXA11-201ENST00000006015 AMIGO2Q86SJ2 522 aa20.2■□□□□ 0.82
HOXA11-201ENST00000006015 SMYD1Q8NB12 490 aa20.2■□□□□ 0.82
HOXA11-201ENST00000006015 HSPBAP1Q96EW2 488 aa20.2■□□□□ 0.82
HOXA11-201ENST00000006015 TRUB2O95900 331 aaKnown RBP20.2■□□□□ 0.82
HOXA11-201ENST00000006015 APRTP07741 180 aa20.2■□□□□ 0.82
HOXA11-201ENST00000006015 CCDC130P13994 396 aa20.2■□□□□ 0.82
HOXA11-201ENST00000006015 TCF7P36402 384 aaPredicted RBP20.2■□□□□ 0.82
HOXA11-201ENST00000006015 MAGEA10P43363 369 aaPredicted RBP20.2■□□□□ 0.82
HOXA11-201ENST00000006015 HARS2P49590 506 aaKnown RBP20.2■□□□□ 0.82
HOXA11-201ENST00000006015 STAT5BP51692 787 aa20.2■□□□□ 0.82
HOXA11-201ENST00000006015 ABCE1P61221 599 aaKnown RBP20.2■□□□□ 0.82
HOXA11-201ENST00000006015 PSMC1P62191 440 aaKnown RBP20.2■□□□□ 0.82
HOXA11-201ENST00000006015 ZNF394Q53GI3 561 aa20.2■□□□□ 0.82
HOXA11-201ENST00000006015 FAXCQ5TGI0 409 aa20.2■□□□□ 0.82
HOXA11-201ENST00000006015 VWA5B1Q5TIE3 1220 aa20.2■□□□□ 0.82
HOXA11-201ENST00000006015 SLFN12LQ6IEE8 588 aa20.2■□□□□ 0.82
HOXA11-201ENST00000006015 PAOXQ6QHF9 649 aa20.2■□□□□ 0.82
HOXA11-201ENST00000006015 MOB2Q70IA6 237 aa20.2■□□□□ 0.82
HOXA11-201ENST00000006015 DLG3Q92796 817 aa20.2■□□□□ 0.82
HOXA11-201ENST00000006015 EBNA1BP2Q99848 306 aaKnown RBP20.2■□□□□ 0.82
HOXA11-201ENST00000006015 CISHQ9NSE2 258 aa20.2■□□□□ 0.82
HOXA11-201ENST00000006015 ZNHIT2Q9UHR6 403 aa20.2■□□□□ 0.82
HOXA11-201ENST00000006015 PCDHA11Q9Y5I1 949 aa20.2■□□□□ 0.82
HOXA11-201ENST00000006015 CAPNS1P04632 268 aa20.19■□□□□ 0.82
HOXA11-201ENST00000006015 MAGEA3P43357 314 aa20.19■□□□□ 0.82
HOXA11-201ENST00000006015 YWHAEP62258 255 aaKnown RBP20.19■□□□□ 0.82
HOXA11-201ENST00000006015 PLOD1Q02809 727 aaPredicted RBP20.19■□□□□ 0.82
HOXA11-201ENST00000006015 SLC44A4Q53GD3 710 aa20.19■□□□□ 0.82
HOXA11-201ENST00000006015 C1QTNF12Q5T7M4 302 aa20.19■□□□□ 0.82
HOXA11-201ENST00000006015 RSPH1Q8WYR4 309 aa20.19■□□□□ 0.82
HOXA11-201ENST00000006015 TFAP2BQ92481 460 aa20.19■□□□□ 0.82
HOXA11-201ENST00000006015 INO80BQ9C086 356 aaPredicted RBP20.19■□□□□ 0.82
HOXA11-201ENST00000006015 PCDH18Q9HCL0 1135 aa20.19■□□□□ 0.82
HOXA11-201ENST00000006015 DCDC2Q9UHG0 476 aa20.19■□□□□ 0.82
HOXA11-201ENST00000006015 USP18Q9UMW8 372 aa20.19■□□□□ 0.82
HOXA11-201ENST00000006015 CNTNAP2Q9UHC6 1331 aa20.19■□□□□ 0.82
HOXA11-201ENST00000006015 SCN4AP35499 1836 aa20.19■□□□□ 0.82
HOXA11-201ENST00000006015 IGKV6D-21A0A0A0MT36 114 aa20.19■□□□□ 0.82
HOXA11-201ENST00000006015 ZBTB14O43829 449 aa20.19■□□□□ 0.82
HOXA11-201ENST00000006015 ARIH2O95376 493 aa20.19■□□□□ 0.82
HOXA11-201ENST00000006015 CST3P01034 146 aaPredicted RBP20.19■□□□□ 0.82
HOXA11-201ENST00000006015 CDKL1Q00532 357 aa20.19■□□□□ 0.82
HOXA11-201ENST00000006015 MMRN1Q13201 1228 aa20.19■□□□□ 0.82
HOXA11-201ENST00000006015 ACAP1Q15027 740 aa20.19■□□□□ 0.82
HOXA11-201ENST00000006015 C10orf107Q8IVU9 208 aa20.19■□□□□ 0.82
HOXA11-201ENST00000006015 LRRC71Q8N4P6 559 aa20.19■□□□□ 0.82
HOXA11-201ENST00000006015 EMC1Q8N766 993 aa20.19■□□□□ 0.82
HOXA11-201ENST00000006015 NIFKQ9BYG3 293 aaKnown RBP20.19■□□□□ 0.82
HOXA11-201ENST00000006015 NIF3L1Q9GZT8 377 aa20.19■□□□□ 0.82
HOXA11-201ENST00000006015 SPATC1LQ9H0A9 340 aa20.19■□□□□ 0.82
HOXA11-201ENST00000006015 COPS7BQ9H9Q2 264 aaPredicted RBP20.19■□□□□ 0.82
HOXA11-201ENST00000006015 ELP3Q9H9T3 547 aa20.19■□□□□ 0.82
HOXA11-201ENST00000006015 VPS28Q9UK41 221 aa20.19■□□□□ 0.82
HOXA11-201ENST00000006015 SH3PXD2BA1X283 911 aa20.18■□□□□ 0.82
HOXA11-201ENST00000006015 TRPA1O75762 1119 aa20.18■□□□□ 0.82
HOXA11-201ENST00000006015 PSMC3P17980 439 aa20.18■□□□□ 0.82
HOXA11-201ENST00000006015 NUDT2P50583 147 aa20.18■□□□□ 0.82
HOXA11-201ENST00000006015 METTL21CQ5VZV1 264 aa20.18■□□□□ 0.82
HOXA11-201ENST00000006015 DENND1BQ6P3S1 775 aa20.18■□□□□ 0.82
HOXA11-201ENST00000006015 BNC2Q6ZN30 1099 aaPredicted RBP20.18■□□□□ 0.82
HOXA11-201ENST00000006015 Q6ZNX1 250 aa20.18■□□□□ 0.82
HOXA11-201ENST00000006015 PATL1Q86TB9 770 aaKnown RBP20.18■□□□□ 0.82
HOXA11-201ENST00000006015 GPC2Q8N158 579 aa20.18■□□□□ 0.82
HOXA11-201ENST00000006015 TSPAN14Q8NG11 270 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms