RNA–Protein interactions for RNA: ENSMUST00000127430.1

Smchd1-201, Transcript of Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Smchd1, Length 7,052 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1-201ENSMUST00000127430 Smok3bC0HKC9 504 aa10.29□□□□□ -0.76
Smchd1-201ENSMUST00000127430 4930579F01RikE9Q3L6 325 aa10.29□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Rfpl4bJ3QPR6 266 aa10.29□□□□□ -0.76
Smchd1-201ENSMUST00000127430 RarbP22605 482 aa10.29□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Usp20Q8C6M1 916 aa10.29□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Fam49bQ921M7 324 aa10.29□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Mbd2Q9Z2E1 414 aa10.29□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Usp54Q8BL06 1588 aaKnown RBP10.29□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Rims2Q9EQZ7 1530 aa10.29□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Simc1E9Q6E9 1354 aa10.29□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Pgbd1E9Q492 415 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Ptch2O35595 1182 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 BC030870Q3V2G4 71 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Lcn3Q62471 182 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Suz12Q80U70 741 aaKnown RBP10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 St7lQ8K4P7 559 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Nol6Q8R5K4 1152 aaKnown RBP10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Gpsm2Q8VDU0 679 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Chid1Q922Q9 393 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 TrabdQ99JY4 376 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Pdcd11Q6NS46 1862 aaKnown RBP10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Pds5aQ6A026 1332 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Gm5483B2RV77 97 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 TdgP56581 421 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Cyp2c37P56654 490 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 NfycP70353 335 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 rp9P97762 213 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Rnf145Q5SWK7 663 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Bsdc1Q80Y55 427 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Mup21Q80YX8 181 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Exoc3l1Q8BI71 739 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Mark4Q8CIP4 752 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Nox1Q8CIZ9 591 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Tmem138Q9D6G5 162 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Trim10Q9WUH5 489 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 M1apQ9Z0E1 529 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Kiaa0232Q80U59 1396 aaKnown RBP10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Smok3cA0A087WSF2 504 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Camk2bP28652 542 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Mapk1P63085 358 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 HnrnpdQ60668 355 aaKnown RBP10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Nudt16Q6P3D0 195 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Lrfn2Q80TG9 788 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Plekhm3Q8BM47 761 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Osbpl2Q8BX94 484 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Ints10Q8K2A7 710 aaKnown RBP10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 GarsQ9CZD3 729 aaKnown RBP10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 PrameQ9D4Z5 464 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Phc2Q9QWH1 850 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Srebf1Q9WTN3 1134 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Gys1Q9Z1E4 738 aaKnown RBP10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Pkd2l1A2A259 760 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Vmn2r74E9PW21 853 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Sp100O35892 482 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Eno2P17183 434 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Gria1P23818 907 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 PrkcdP28867 674 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Sstr1P30873 391 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 CratP47934 626 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Cdk7Q03147 346 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Glt6d1Q2NKH9 311 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Ak8Q32M07 479 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 CybbQ61093 570 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Vsx2Q61412 361 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Mrps35Q8BJZ4 320 aaKnown RBP10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Wwp1Q8BZZ3 918 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 4932414N04RikQ8CEQ9 752 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Aim2Q91VJ1 354 aaKnown RBP10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Pcdhgb1Q91XX8 918 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Psrc1Q9D0P7 329 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Zcchc7B1AX39 541 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Nfatc2ipO09130 412 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Hk1P17710 974 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Pou2f2Q00196 463 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Samhd1Q60710 627 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 OclnQ61146 521 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Jak2Q62120 1129 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Zcchc2Q69ZB8 1166 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Cpne3Q8BT60 533 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Btbd9Q8C726 612 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Tbc1d10cQ8C9V1 444 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Extl2Q9ES89 330 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Mid2Q9QUS6 705 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Scamp3O35609 349 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 AurkcO88445 282 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Rps6ka3P18654 740 aaKnown RBP10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 GemP55041 295 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Gtpbp6Q3U6U5 514 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Nr2c1Q505F1 590 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 E2f5Q61502 335 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Arhgap12Q8C0D4 838 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Gatad2bQ8VHR5 594 aaKnown RBP10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 CenpsQ9D084 142 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Bcl2l12Q9D3J3 255 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Gsdmdc1Q9D8T2 487 aa10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 PpieQ9QZH3 301 aaKnown RBP10.28□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Flt1P35969 1333 aa10.27□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Mindy4b-psA0A1W2P7H6 457 aa10.27□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Ccdc163A2AGD7 326 aa10.27□□□□□ -0.76
Smchd1-201ENSMUST00000127430 Osbpl8B9EJ86 889 aa10.27□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 40.7 ms