RNA–Protein interactions for RNA: ENSMUST00000100069.8

Scn3a-202, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 8,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-202ENSMUST00000100069 Hdgfl2Q3UMU9 669 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Smarcd1Q61466 515 aaKnown RBP7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Ptger2Q62053 362 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Wee2Q66JT0 555 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Bpifb9aQ80XI7 591 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Chmp1b2Q9CQD4 199 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Vps28Q9D1C8 221 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Tceal6Q9DB24 200 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Plscr1Q9JJ00 328 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 RhoaQ9QUI0 193 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Armt1A6H630 439 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Kcnt2D3Z649 1135 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Rin3P59729 980 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Rpl22P67984 128 aaKnown RBP7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Lpcat1Q3TFD2 534 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Fam91a1Q3UVG3 837 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Frmd5Q6P5H6 517 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Kcnf1Q7TSH7 493 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Sfrp1Q8C4U3 314 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Fam83aQ8K2P2 436 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Tmcc3Q8R310 477 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Epsti1Q8VDI1 314 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 TgdsQ8VDR7 355 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Olfr1122Q8VGT9 326 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Aim2Q91VJ1 354 aaKnown RBP7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Eps8l2Q99K30 729 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Mettl16Q9CQG2 553 aaKnown RBP7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Cmtm6Q9CZ69 183 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Sh3glb1Q9JK48 365 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Ahdc1Q6PAL7 1594 aaKnown RBP7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 MaddQ80U28 1577 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Scgb2b21A0A087WQA9 112 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Vmn2r55G3UWZ4 781 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Vmn2r53L7N473 806 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 AmacrO09174 381 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Bnc1O35914 961 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Mtnd3P03899 115 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 AcadmP45952 421 aaKnown RBP7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Stt3bQ3TDQ1 823 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Ttc9Q3V038 219 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Trim67Q505D9 768 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Rft1Q8C3B8 541 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Vcpip1Q8CDG3 1220 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Tceal3Q8R0A5 200 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Sgsm3Q8VCZ6 750 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Adck1Q9D0L4 525 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 PrameQ9D4Z5 464 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 UqcrbQ9D855 111 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Mroh2aD3Z750 1679 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Lgr4A2ARI4 951 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Mms22lB1AUR6 1238 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 LtfP08071 707 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Ubxn7Q6P5G6 467 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Ttc39cQ8VE09 580 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Tlr9Q9EQU3 1032 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Capn10Q9ESK3 666 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Mpp6Q9JLB0 553 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Vav3Q9R0C8 847 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Hist1h2abC0HKE1 130 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Hist1h2acC0HKE2 130 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Hist1h2adC0HKE3 130 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Hist1h2aeC0HKE4 130 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Hist1h2agC0HKE5 130 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Hist1h2aiC0HKE6 130 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Hist1h2anC0HKE7 130 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Hist1h2aoC0HKE8 130 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Hist1h2apC0HKE9 130 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Rfpl4bJ3QPR6 266 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 OsmrO70458 971 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 SagP20443 403 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Celf1P28659 486 aaKnown RBP7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Gal3st3P61315 431 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Copz1P61924 177 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Hnrnph2P70333 449 aaKnown RBP7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Pou1f1Q00286 291 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Proser1Q5PRE5 913 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Fnip1Q68FD7 1165 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Klhl5Q6PFE1 708 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Hist3h2aQ8BFU2 130 aaKnown RBP7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Kansl2Q8BQR4 486 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Vps26bQ8C0E2 336 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Dennd2aQ8C4S8 1000 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Leng8Q8CBY3 785 aaKnown RBP7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Atg14Q8CDJ3 492 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Hist1h2afQ8CGP5 130 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Hist1h2ahQ8CGP6 128 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Hist1h2akQ8CGP7 130 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 H2afjQ8R1M2 129 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 AagabQ8R2R3 316 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 GcshQ91WK5 170 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Tex13bQ99MW5 186 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Copg2Q9QXK3 871 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Tsc22d3Q9Z2S7 137 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Sult2a7A0A1B0GRF0 313 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Tnfrsf25B1AWN9 411 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Kpna7C0LLJ0 499 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Gm6460F6YJZ8 199 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 MttpO08601 894 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Tuba1bP05213 451 aa7.04□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Cdc42P60766 191 aa7.04□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms