RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Trim7Q923T7 510 aa16.45■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Grk2Q99MK8 689 aa16.45■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Trem2Q99NH8 227 aa16.45■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Atp5hQ9DCX2 161 aa16.45■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Morc1Q9WVL5 950 aa16.45■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Pecam1Q08481 727 aaKnown RBP16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Ano7Q14AT5 859 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Capn11Q6J756 714 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 CyldQ80TQ2 952 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Mis18bp1Q80WQ8 998 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Xylt1Q811B1 953 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Snx17Q8BVL3 470 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Dedd2Q8QZV0 330 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Pacsin3Q99JB8 424 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Ptpn4Q9WU22 926 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Tada2bD3Z4Z0 420 aaKnown RBP16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Pold2O35654 469 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 PrkcdP28867 674 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 PapolaQ61183 739 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Znf148Q61624 794 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Arhgap18Q8K0Q5 663 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Acad10Q8K370 1069 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Slc36a1Q8K4D3 475 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Krt5Q922U2 580 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Sntg2Q925E0 539 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Ndufaf1Q9CWX2 328 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 LactbQ9EP89 551 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Kat2aQ9JHD2 830 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Arid2E9Q7E2 1828 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Ercc2O08811 760 aaKnown RBP16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 AlplP09242 524 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Scp2P32020 547 aaKnown RBP16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Mc4rP56450 332 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Adamts1P97857 968 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Muc1Q02496 630 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Mrgprb1Q3UG61 350 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Thrap3Q569Z6 951 aaKnown RBP16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Atp2a3Q64518 1038 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Ankrd6Q69ZU8 712 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Zfp512bQ6PHP4 879 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Zdhhc17Q80TN5 632 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Scara3Q8C850 606 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Tgif2lx2Q8K5B9 231 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Zcchc14Q8VIG0 956 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Dtnbp1Q91WZ8 352 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Ndufa10Q99LC3 355 aaKnown RBP16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 PompQ9CQT5 141 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Kdm8Q9CXT6 414 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Drc3Q9D5E4 523 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Tsga13Q9DA17 273 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Ropn1Q9ESG2 212 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Dach1Q9QYB2 751 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Tmem115Q9WUH1 350 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Slc23a1Q9Z2J0 605 aa16.44■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Itga9B8JK39 1036 aa16.43■□□□□ 0.22
Ckap4-201ENSMUST00000053871 B020004C17RikJ3QP07 232 aa16.43■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Il2P04351 169 aa16.43■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Usp1Q8BJQ2 784 aa16.43■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Hspbap1Q8BK58 483 aa16.43■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Rmnd1Q8CI78 450 aa16.43■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Gfra4Q9JJT2 260 aa16.43■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Gbp2Q9Z0E6 589 aa16.43■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Cdc42ep5Q9Z0X0 150 aa16.43■□□□□ 0.22
Ckap4-201ENSMUST00000053871 A930018M24RikB7ZMY3 218 aa16.43■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Vmn2r72D3Z4N8 856 aa16.43■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Morc3F7BJB9 942 aaKnown RBP16.43■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Matn1P51942 500 aaKnown RBP16.43■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Ranbp9P69566 653 aa16.43■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Ptcd3Q14C51 685 aaKnown RBP16.43■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Garnl3Q3V0G7 1038 aa16.43■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Atp4aQ64436 1033 aa16.43■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Pard3bQ9CSB4 1203 aa16.43■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Akr1c12Q9JLI0 323 aa16.43■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Map3k6Q9WTR2 1291 aa16.43■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Gm4756A0A140LIS8 335 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Scg3P47867 471 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Zfp658Q5PPQ4 887 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Olfr533Q7TRT7 320 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Olfr299Q7TS05 330 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Dnajc16Q80TN4 772 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Aste1Q8BIR2 672 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Tmco6Q8BQX5 494 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Arhgef33Q8BW86 850 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 HpdlQ8K248 371 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Smim14Q91VT8 99 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Thg1lQ9CY52 298 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Tomm20lQ9D4V6 152 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Maged2Q9ER67 616 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Dhx35A2ACQ1 703 aaKnown RBP16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Ttll8A4Q9F1 832 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 PiggD3Z3Y1 983 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Daw1D3Z7A5 415 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 NoctO35710 429 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Cdh16O88338 830 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Kcnj6P48542 425 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Aarsd1Q3THG9 412 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Castor2Q8CAB8 329 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Ace2Q8R0I0 805 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Usp3Q91W36 520 aaKnown RBP16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Pcdha6Q91Y14 946 aa16.42■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 33.9 ms