RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 MsraQ9D6Y7 233 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Ing2Q9ESK4 281 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Dbn1Q9QXS6 706 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Plcg1Q62077 1302 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Olfr271-ps1A0A1L1SQH2 283 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 4930469K13RikA0A286YDB2 92 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Zar1lC3VD30 291 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Trim5E9PV98 497 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 ChkaO54804 453 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Mmp10O55123 476 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 ChrngP04760 519 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Il12bP43432 335 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 CtshP49935 333 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Rpl10aP53026 217 aaKnown RBP12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 PklrP53657 574 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 GabpaQ00422 454 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Nek10Q3UGM2 1111 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Pld5Q3UNN8 536 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Ankrd13bQ5F259 626 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Traf3Q60803 567 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Chi3l1Q61362 389 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Znf507Q6ZPY5 941 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Fam210aQ8BGY7 273 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Lrrc24Q8BHA1 521 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Trub1Q8C0D0 338 aaKnown RBP12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Kat14Q8CID0 779 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 HscbQ8K3A0 234 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Sh3kbp1Q8R550 709 aaKnown RBP12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 MyocdQ8VIM5 935 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Rnf31Q924T7 1066 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Bcas2Q9D287 225 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Bpifa3Q9D9J8 232 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Slc13a2Q9ES88 586 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 FibpQ9JI19 357 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Tdp2Q9JJX7 370 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Dach1Q9QYB2 751 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Rbck1Q9WUB0 508 aa12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Wdr46Q9Z0H1 622 aaKnown RBP12.38□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Cacna1fQ9JIS7 1985 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Atrnl1Q6A051 1378 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Zgrf1Q0VGT4 1863 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Gm13941A2AJ38 245 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Olfr1305A2AVW3 312 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 AmacrO09174 381 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 DffaO54786 331 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 AvilO88398 819 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Dnmt3bO88509 859 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Serpinh1P19324 417 aaKnown RBP12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 RarbP22605 482 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Glb1P23780 647 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Bcat1P24288 386 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Tuba1cP68373 449 aaKnown RBP12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Gm4951Q3UED7 406 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Zbtb16Q3UQ17 673 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Gm29609Q3UU56 907 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Akap14Q3V0I7 536 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Trim38Q5SZ99 471 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Itih1Q61702 907 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Map2k2Q63932 401 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Wee2Q66JT0 555 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Ggnbp1Q6K1E7 370 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Atp2c1Q80XR2 918 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Q810S2 196 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Zfp438Q8BFX2 798 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Gtf3c2Q8BL74 907 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Cdh7Q8BM92 785 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Sfr1Q8BP27 319 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Gprasp2Q8BUY8 826 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Lca5lQ8C0X0 741 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Samd4aQ8CBY1 711 aaKnown RBP12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Ero1bQ8R2E9 467 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Atp5c1Q91VR2 298 aaKnown RBP12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Ces1fQ91WU0 561 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Socs4Q91ZA6 436 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Trim7Q923T7 510 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Mcrs1Q99L90 462 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 CsadQ9DBE0 493 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Gpr45Q9EQQ4 373 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Tuba8Q9JJZ2 449 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Gpc1Q9QZF2 557 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Trip11E9Q512 1976 aa12.37□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Pgap3A2A559 320 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Fam171a2A2A699 822 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Gm4846B2RWH8 538 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 2310061I04RikB8JJ69 315 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 PtproE9Q612 1226 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Rad51ap2G3UW63 976 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Abhd12bG3UZN6 359 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Serpinb3aG3X9V8 387 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Foxm1O08696 760 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Pde9aO70628 534 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Psmc3O88685 442 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Slc1a2P43006 572 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Hddc2Q3SXD3 199 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Patl1Q3TC46 770 aaKnown RBP12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 D630036H23RikQ3UQD6 204 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Wdr18Q4VBE8 431 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Stxbp2Q64324 593 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Klhl14Q69ZK5 630 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Vat1lQ80TB8 417 aa12.36□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 42 ms