RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 ZMAT2Q96NC0 199 aaKnown RBP14.25□□□□□ -0.13
PHGDH-233ENST00000642021 C1orf21Q9H246 121 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 VCXQ9H320 206 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 ZNF358Q9NW07 568 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 AP4E1Q9UPM8 1137 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 C2CD2Q9Y426 696 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 PLIN3O60664 434 aa14.24□□□□□ -0.13
PHGDH-233ENST00000642021 CIB2O75838 187 aa14.24□□□□□ -0.13
PHGDH-233ENST00000642021 ZCCHC18P0CG32 403 aa14.24□□□□□ -0.13
PHGDH-233ENST00000642021 GNAT1P11488 350 aa14.24□□□□□ -0.13
PHGDH-233ENST00000642021 NIPAL4Q0D2K0 466 aa14.24□□□□□ -0.13
PHGDH-233ENST00000642021 PCLAFQ15004 111 aa14.24□□□□□ -0.13
PHGDH-233ENST00000642021 BSPRYQ5W0U4 402 aa14.24□□□□□ -0.13
PHGDH-233ENST00000642021 HEATR6Q6AI08 1181 aaKnown RBP14.24□□□□□ -0.13
PHGDH-233ENST00000642021 KYAT3Q6YP21 454 aaKnown RBP14.24□□□□□ -0.13
PHGDH-233ENST00000642021 ANKRD23Q86SG2 305 aa14.24□□□□□ -0.13
PHGDH-233ENST00000642021 C10orf107Q8IVU9 208 aa14.24□□□□□ -0.13
PHGDH-233ENST00000642021 QKIQ96PU8 341 aaKnown RBP eCLIP14.24□□□□□ -0.13
PHGDH-233ENST00000642021 SORT1Q99523 831 aa14.24□□□□□ -0.13
PHGDH-233ENST00000642021 XPNPEP3Q9NQH7 507 aa14.24□□□□□ -0.13
PHGDH-233ENST00000642021 TMPRSS4Q9NRS4 437 aa14.24□□□□□ -0.13
PHGDH-233ENST00000642021 SPATS2LQ9NUQ6 558 aaKnown RBP14.24□□□□□ -0.13
PHGDH-233ENST00000642021 ANGPTL2Q9UKU9 493 aa14.24□□□□□ -0.13
PHGDH-233ENST00000642021 SOX13Q9UN79 622 aa14.24□□□□□ -0.13
PHGDH-233ENST00000642021 A6NJR5 290 aa14.24□□□□□ -0.13
PHGDH-233ENST00000642021 MGAT1P26572 445 aa14.24□□□□□ -0.13
PHGDH-233ENST00000642021 STILQ15468 1287 aa14.24□□□□□ -0.13
PHGDH-233ENST00000642021 STEAP4Q687X5 459 aa14.24□□□□□ -0.13
PHGDH-233ENST00000642021 DEFB132Q7Z7B7 95 aa14.24□□□□□ -0.13
PHGDH-233ENST00000642021 WDR75Q8IWA0 830 aaKnown RBP14.24□□□□□ -0.13
PHGDH-233ENST00000642021 PYDC1Q8WXC3 89 aa14.24□□□□□ -0.13
PHGDH-233ENST00000642021 DDX43Q9NXZ2 648 aaKnown RBP14.24□□□□□ -0.13
PHGDH-233ENST00000642021 MYO18AQ92614 2054 aaKnown RBP14.23□□□□□ -0.13
PHGDH-233ENST00000642021 MAGEA13PA6NCF6 341 aa14.23□□□□□ -0.13
PHGDH-233ENST00000642021 BUD23O43709 281 aaKnown RBP14.23□□□□□ -0.13
PHGDH-233ENST00000642021 SLC26A2P50443 739 aa14.23□□□□□ -0.13
PHGDH-233ENST00000642021 OLIG2Q13516 323 aa14.23□□□□□ -0.13
PHGDH-233ENST00000642021 PEX6Q13608 980 aa14.23□□□□□ -0.13
PHGDH-233ENST00000642021 C1QTNF12Q5T7M4 302 aa14.23□□□□□ -0.13
PHGDH-233ENST00000642021 SESTD1Q86VW0 696 aa14.23□□□□□ -0.13
PHGDH-233ENST00000642021 COLGALT1Q8NBJ5 622 aa14.23□□□□□ -0.13
PHGDH-233ENST00000642021 HTR3CQ8WXA8 447 aa14.23□□□□□ -0.13
PHGDH-233ENST00000642021 NDRG1Q92597 394 aaKnown RBP14.23□□□□□ -0.13
PHGDH-233ENST00000642021 CENPIQ92674 756 aaPredicted RBP14.23□□□□□ -0.13
PHGDH-233ENST00000642021 ERAP1Q9NZ08 941 aa14.23□□□□□ -0.13
PHGDH-233ENST00000642021 TMEM216Q9P0N5 145 aa14.23□□□□□ -0.13
PHGDH-233ENST00000642021 ARHGAP42A6NI28 874 aa14.23□□□□□ -0.13
PHGDH-233ENST00000642021 TSPAN1O60635 241 aa14.23□□□□□ -0.13
PHGDH-233ENST00000642021 SIN3BO75182 1162 aa14.23□□□□□ -0.13
PHGDH-233ENST00000642021 LCP1P13796 627 aa14.23□□□□□ -0.13
PHGDH-233ENST00000642021 AP2B1P63010 937 aa14.23□□□□□ -0.13
PHGDH-233ENST00000642021 RAPH1Q70E73 1250 aa14.23□□□□□ -0.13
PHGDH-233ENST00000642021 CYS1Q717R9 158 aa14.23□□□□□ -0.13
PHGDH-233ENST00000642021 MARK2Q7KZI7 788 aaKnown RBP14.23□□□□□ -0.13
PHGDH-233ENST00000642021 EFCAB3Q8N7B9 438 aa14.23□□□□□ -0.13
PHGDH-233ENST00000642021 LINC01465Q8N7H1 131 aa14.23□□□□□ -0.13
PHGDH-233ENST00000642021 ECSITQ9BQ95 431 aa14.23□□□□□ -0.13
PHGDH-233ENST00000642021 PAPOLBQ9NRJ5 636 aaKnown RBP14.23□□□□□ -0.13
PHGDH-233ENST00000642021 NDE1Q9NXR1 346 aa14.23□□□□□ -0.13
PHGDH-233ENST00000642021 USP3Q9Y6I4 520 aa14.23□□□□□ -0.13
PHGDH-233ENST00000642021 TRIP11Q15643 1979 aa14.23□□□□□ -0.13
PHGDH-233ENST00000642021 ZNF195O14628 629 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 AHCYL1O43865 530 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 DGKIO75912 1065 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 ZBTB7AO95365 584 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 STAU1O95793 577 aaKnown RBP14.22□□□□□ -0.13
PHGDH-233ENST00000642021 NR2C2P49116 596 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 IDH3AP50213 366 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 CDC16Q13042 620 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 ZRSR2Q15696 482 aaKnown RBP14.22□□□□□ -0.13
PHGDH-233ENST00000642021 LRRC36Q1X8D7 754 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 C6orf163Q5TEZ5 329 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 TMCO4Q5TGY1 634 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 C4orf22Q6V702 233 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 TP53INP2Q8IXH6 220 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 RBPJLQ9UBG7 517 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 SCN1AP35498 2009 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 A0A0A0MRY4 1105 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 LOC100653049A0A140TA62 436 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 KRT34O76011 436 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 PDE5AO76074 875 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 PROCP04070 461 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 LYNP07948 512 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 ITGA2BP08514 1039 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 PDGFRBP09619 1106 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 ERVK-10P10266 1014 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 CCDC130P13994 396 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 CD1EP15812 388 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 CRABP2P29373 138 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 MLH1P40692 756 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 PTPN9P43378 593 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 GTF2A2P52657 109 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 POU5F1BQ06416 359 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 TBCCQ15814 346 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 SLC30A9Q6PML9 568 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 FAM131BQ86XD5 332 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 IFNLR1Q8IU57 520 aaPredicted RBP14.22□□□□□ -0.13
PHGDH-233ENST00000642021 OR6B3Q8NGW1 331 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 TFB1MQ8WVM0 346 aaKnown RBP14.22□□□□□ -0.13
PHGDH-233ENST00000642021 C18orf25Q96B23 403 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms