RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 SPTAN1Q13813 2472 aaKnown RBP7.78□□□□□ -1.16
PHGDH-225ENST00000641720 USP9YO00507 2555 aaPredicted RBP7.77□□□□□ -1.16
PHGDH-225ENST00000641720 NBASA2RRP1 2371 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 ZNF840PA6NDX5 716 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 TK2O00142 265 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 O00370 1275 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 FOXN3O00409 490 aaPredicted RBP7.77□□□□□ -1.17
PHGDH-225ENST00000641720 SCAMP3O14828 347 aaKnown RBP7.77□□□□□ -1.17
PHGDH-225ENST00000641720 CYP26A1O43174 497 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 HOXC11O43248 304 aaPredicted RBP7.77□□□□□ -1.17
PHGDH-225ENST00000641720 TLX3O43711 291 aaPredicted RBP7.77□□□□□ -1.17
PHGDH-225ENST00000641720 ATXN1LP0C7T5 689 aaKnown RBP7.77□□□□□ -1.17
PHGDH-225ENST00000641720 ZNF883P0CG24 379 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 CD19P15391 556 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 PFKLP17858 780 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 BDNFP23560 247 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 ITPKBP27987 946 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 USP8P40818 1118 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 TNFRSF4P43489 277 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 MFAP3P55082 362 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 RPL6Q02878 288 aaKnown RBP7.77□□□□□ -1.17
PHGDH-225ENST00000641720 DRAP1Q14919 205 aaPredicted RBP7.77□□□□□ -1.17
PHGDH-225ENST00000641720 NFE2Q16621 373 aaPredicted RBP7.77□□□□□ -1.17
PHGDH-225ENST00000641720 GOLGA7BQ2TAP0 167 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 FILIP1LQ4L180 1135 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 EOGTQ5NDL2 527 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 PPP1R26Q5T8A7 1209 aaPredicted RBP7.77□□□□□ -1.17
PHGDH-225ENST00000641720 E4F1Q66K89 784 aaPredicted RBP7.77□□□□□ -1.17
PHGDH-225ENST00000641720 ENOSF1Q7L5Y1 443 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 TTC30AQ86WT1 665 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 FAM71AQ8IYT1 594 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 HDDC3Q8N4P3 179 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 TTC39CQ8N584 583 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 ZMIZ2Q8NF64 920 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 NEK11Q8NG66 645 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 CCDC26Q8TAB7 109 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 BAP1Q92560 729 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 JAKMIP2Q96AA8 810 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 TMEM176AQ96HP8 235 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 FUBP3Q96I24 572 aaKnown RBP eCLIP7.77□□□□□ -1.17
PHGDH-225ENST00000641720 SPATA17Q96L03 361 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 HSPA12BQ96MM6 686 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 UBL7Q96S82 380 aaPredicted RBP7.77□□□□□ -1.17
PHGDH-225ENST00000641720 PNKPQ96T60 521 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 GABRG3Q99928 467 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 SLC6A17Q9H1V8 727 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 FAM124BQ9H5Z6 455 aaPredicted RBP7.77□□□□□ -1.17
PHGDH-225ENST00000641720 TRPC7Q9HCX4 862 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 BTBD3Q9Y2F9 522 aa7.77□□□□□ -1.17
PHGDH-225ENST00000641720 FNDC3AQ9Y2H6 1198 aaKnown RBP7.77□□□□□ -1.17
PHGDH-225ENST00000641720 TEP1Q99973 2627 aaKnown RBP7.76□□□□□ -1.17
PHGDH-225ENST00000641720 TRABD2BA6NFA1 517 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 C10orf142B7Z368 130 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 F8VP50 259 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 TULP2O00295 520 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 TRIM66O15016 1216 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 TULP3O75386 442 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 AP1G2O75843 785 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 BEST1O76090 585 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 ALDH1A2O94788 518 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 PAEPP09466 180 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 HDCP19113 662 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 CLCN1P35523 988 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 GRIA2P42262 883 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 KDSRQ06136 332 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 CYP4F3Q08477 520 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 MAPRE1Q15691 268 aaKnown RBP7.76□□□□□ -1.17
PHGDH-225ENST00000641720 SMAD1Q15797 465 aaKnown RBP7.76□□□□□ -1.17
PHGDH-225ENST00000641720 SGO2Q562F6 1265 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 LY6G5CQ5SRR4 150 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 EGFLAMQ63HQ2 1017 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 ARHGAP17Q68EM7 881 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 SLC36A4Q6YBV0 504 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 C4orf50Q6ZRC1 276 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 GPRIN1Q7Z2K8 1008 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 SLC47A2Q86VL8 602 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 SCN4BQ8IWT1 228 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 TERB1Q8NA31 727 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 KCNV2Q8TDN2 545 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 SLC20A1Q8WUM9 679 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 SLC39A7Q92504 469 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 EXOC4Q96A65 974 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 CYFIP2Q96F07 1278 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 SMARCD1Q96GM5 515 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 HEXIM2Q96MH2 286 aaKnown RBP7.76□□□□□ -1.17
PHGDH-225ENST00000641720 HNRNPABQ99729 332 aaKnown RBP7.76□□□□□ -1.17
PHGDH-225ENST00000641720 SMOQ99835 787 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 MED10Q9BTT4 135 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 STK33Q9BYT3 514 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 ARHGEF4Q9NR80 690 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 USP36Q9P275 1121 aaKnown RBP7.76□□□□□ -1.17
PHGDH-225ENST00000641720 NOCTQ9UK39 431 aaKnown RBP7.76□□□□□ -1.17
PHGDH-225ENST00000641720 TSPAN16Q9UKR8 245 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.76□□□□□ -1.17
PHGDH-225ENST00000641720 RAI2Q9Y5P3 530 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 ATP8B3O60423 1300 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 ITIH6Q6UXX5 1313 aa7.76□□□□□ -1.17
PHGDH-225ENST00000641720 FAM170AA1A519 330 aa7.75□□□□□ -1.17
PHGDH-225ENST00000641720 LRRC53A6NM62 1247 aa7.75□□□□□ -1.17
PHGDH-225ENST00000641720 PRRT4C9JH25 899 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms