RNA–Protein interactions for RNA: ENST00000641715.1

SAMMSON-221, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-221ENST00000641715 POLR2FP61218 127 aaKnown RBP12.23□□□□□ -0.45
SAMMSON-221ENST00000641715 SLC6A3Q01959 620 aa12.23□□□□□ -0.45
SAMMSON-221ENST00000641715 SYCP1Q15431 976 aa12.23□□□□□ -0.45
SAMMSON-221ENST00000641715 ZC3H12AQ5D1E8 599 aaKnown RBP12.23□□□□□ -0.45
SAMMSON-221ENST00000641715 MPP7Q5T2T1 576 aa12.23□□□□□ -0.45
SAMMSON-221ENST00000641715 RNF43Q68DV7 783 aa12.23□□□□□ -0.45
SAMMSON-221ENST00000641715 SDE2Q6IQ49 451 aa12.23□□□□□ -0.45
SAMMSON-221ENST00000641715 DEFB106AQ8N104 65 aa12.23□□□□□ -0.45
SAMMSON-221ENST00000641715 PGBD3Q8N328 593 aa12.23□□□□□ -0.45
SAMMSON-221ENST00000641715 TMEM35BQ8NCS4 154 aa12.23□□□□□ -0.45
SAMMSON-221ENST00000641715 ANKRD20A12PQ8NF67 263 aa12.23□□□□□ -0.45
SAMMSON-221ENST00000641715 WFDC5Q8TCV5 224 aa12.23□□□□□ -0.45
SAMMSON-221ENST00000641715 EPS8L1Q8TE68 723 aa12.23□□□□□ -0.45
SAMMSON-221ENST00000641715 SORCS1Q8WY21 1168 aa12.23□□□□□ -0.45
SAMMSON-221ENST00000641715 LOXL4Q96JB6 756 aa12.23□□□□□ -0.45
SAMMSON-221ENST00000641715 NUCKS1Q9H1E3 243 aaKnown RBP12.23□□□□□ -0.45
SAMMSON-221ENST00000641715 ARRDC1-AS1Q9H2J1 176 aa12.23□□□□□ -0.45
SAMMSON-221ENST00000641715 PDCL3Q9H2J4 239 aa12.23□□□□□ -0.45
SAMMSON-221ENST00000641715 SYNCQ9H7C4 482 aa12.23□□□□□ -0.45
SAMMSON-221ENST00000641715 NLRC4Q9NPP4 1024 aa12.23□□□□□ -0.45
SAMMSON-221ENST00000641715 SEMA4GQ9NTN9 838 aa12.23□□□□□ -0.45
SAMMSON-221ENST00000641715 ASNSD1Q9NWL6 643 aa12.23□□□□□ -0.45
SAMMSON-221ENST00000641715 THAP10Q9P2Z0 257 aaPredicted RBP12.23□□□□□ -0.45
SAMMSON-221ENST00000641715 USP18Q9UMW8 372 aa12.23□□□□□ -0.45
SAMMSON-221ENST00000641715 CEP83Q9Y592 693 aa12.23□□□□□ -0.45
SAMMSON-221ENST00000641715 RAD54BQ9Y620 910 aa12.23□□□□□ -0.45
SAMMSON-221ENST00000641715 GON4LQ3T8J9 2241 aa12.23□□□□□ -0.45
SAMMSON-221ENST00000641715 HSF2BPO75031 334 aa12.22□□□□□ -0.45
SAMMSON-221ENST00000641715 GFPT2O94808 682 aa12.22□□□□□ -0.45
SAMMSON-221ENST00000641715 MMEP08473 750 aa12.22□□□□□ -0.45
SAMMSON-221ENST00000641715 BCKDHBP21953 392 aa12.22□□□□□ -0.45
SAMMSON-221ENST00000641715 GBP1P32455 592 aa12.22□□□□□ -0.45
SAMMSON-221ENST00000641715 P2RY2P41231 377 aa12.22□□□□□ -0.45
SAMMSON-221ENST00000641715 IL12RB1P42701 662 aa12.22□□□□□ -0.45
SAMMSON-221ENST00000641715 SNX16P57768 344 aa12.22□□□□□ -0.45
SAMMSON-221ENST00000641715 RPS24P62847 133 aaKnown RBP12.22□□□□□ -0.45
SAMMSON-221ENST00000641715 CDK17Q00537 523 aa12.22□□□□□ -0.45
SAMMSON-221ENST00000641715 UBXN1Q04323 297 aa12.22□□□□□ -0.45
SAMMSON-221ENST00000641715 ENPP2Q13822 863 aa12.22□□□□□ -0.45
SAMMSON-221ENST00000641715 CCDC6Q16204 474 aa12.22□□□□□ -0.45
SAMMSON-221ENST00000641715 SLC26A9Q7LBE3 791 aa12.22□□□□□ -0.45
SAMMSON-221ENST00000641715 IPO4Q8TEX9 1081 aaKnown RBP12.22□□□□□ -0.45
SAMMSON-221ENST00000641715 UCMAQ8WVF2 138 aa12.22□□□□□ -0.45
SAMMSON-221ENST00000641715 RMDN1Q96DB5 314 aa12.22□□□□□ -0.45
SAMMSON-221ENST00000641715 PRICKLE1Q96MT3 831 aaPredicted RBP12.22□□□□□ -0.45
SAMMSON-221ENST00000641715 IRX2Q9BZI1 471 aaPredicted RBP12.22□□□□□ -0.45
SAMMSON-221ENST00000641715 CIPCQ9C0C6 399 aa12.22□□□□□ -0.45
SAMMSON-221ENST00000641715 ABCB8Q9NUT2 735 aa12.22□□□□□ -0.45
SAMMSON-221ENST00000641715 NOCTQ9UK39 431 aaKnown RBP12.22□□□□□ -0.45
SAMMSON-221ENST00000641715 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.22□□□□□ -0.45
SAMMSON-221ENST00000641715 STON1Q9Y6Q2 735 aa12.22□□□□□ -0.45
SAMMSON-221ENST00000641715 PLXND1Q9Y4D7 1925 aa12.22□□□□□ -0.45
SAMMSON-221ENST00000641715 NUP205Q92621 2012 aa12.22□□□□□ -0.45
SAMMSON-221ENST00000641715 SYNJ2BP-COX16A0A087WUM0 186 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 RHOBTB1O94844 696 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 EPN2O95208 641 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 APOEP02649 317 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 NDUFV2P19404 249 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 SOX5P35711 763 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 GABRB2P47870 512 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 ID4P47928 161 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 ZNF234Q14588 700 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 EIF4HQ15056 248 aaKnown RBP12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 ELF2Q15723 593 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 CSRP2Q16527 193 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 MAP7D1Q3KQU3 841 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 C2CD6Q53TS8 623 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 MS4A13Q5J8X5 152 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 PMS2CLQ68D20 193 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 KIAA0907Q7Z7F0 614 aaPredicted RBP12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 ADIPOR2Q86V24 386 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 DHX40Q8IX18 779 aaKnown RBP12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 ZNF397Q8NF99 534 aaPredicted RBP12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 SLC20A1Q8WUM9 679 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 BTN2A3PQ96KV6 586 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 ERGIC2Q96RQ1 377 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 DDX50Q9BQ39 737 aaKnown RBP12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 BPIFA3Q9BQP9 254 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 ADAM33Q9BZ11 813 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 NAT10Q9H0A0 1025 aaKnown RBP12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 SLC6A17Q9H1V8 727 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 FAM204AQ9H8W3 233 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 DDIT4Q9NX09 232 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 COX16Q9P0S2 106 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 CALCOCO1Q9P1Z2 691 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 STIM2Q9P246 746 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 MBD1Q9UIS9 605 aaPredicted RBP12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 GGA2Q9UJY4 613 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 CACNA1AO00555 2505 aa12.21□□□□□ -0.45
SAMMSON-221ENST00000641715 KCNU1A8MYU2 1149 aa12.21□□□□□ -0.46
SAMMSON-221ENST00000641715 NPC1O15118 1278 aa12.21□□□□□ -0.46
SAMMSON-221ENST00000641715 TIMM44O43615 452 aa12.21□□□□□ -0.46
SAMMSON-221ENST00000641715 DAB1O75553 588 aa12.21□□□□□ -0.46
SAMMSON-221ENST00000641715 LSM8O95777 96 aaKnown RBP12.21□□□□□ -0.46
SAMMSON-221ENST00000641715 PABPC1P11940 636 aaKnown RBP12.21□□□□□ -0.46
SAMMSON-221ENST00000641715 CD70P32970 193 aa12.21□□□□□ -0.46
SAMMSON-221ENST00000641715 NOS2P35228 1153 aa12.21□□□□□ -0.46
SAMMSON-221ENST00000641715 RNASE9P60153 205 aaKnown RBP12.21□□□□□ -0.46
SAMMSON-221ENST00000641715 FUT11Q495W5 492 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms