RNA–Protein interactions for RNA: ENST00000641643.1

SYT6-210, Transcript of synaptotagmin 6, humanhuman

BASIC

Gene SYT6, Length 1,587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT6-210ENST00000641643 DCLK2Q8N568 766 aa23.22■■□□□ 1.31
SYT6-210ENST00000641643 ATP6V0D2Q8N8Y2 350 aa23.22■■□□□ 1.31
SYT6-210ENST00000641643 ZNF557Q8N988 423 aaPredicted RBP23.22■■□□□ 1.31
SYT6-210ENST00000641643 CPA5Q8WXQ8 436 aa23.22■■□□□ 1.31
SYT6-210ENST00000641643 TPSD1Q9BZJ3 242 aa23.22■■□□□ 1.31
SYT6-210ENST00000641643 CBX8Q9HC52 389 aa23.22■■□□□ 1.31
SYT6-210ENST00000641643 FAM170AA1A519 330 aa23.21■■□□□ 1.31
SYT6-210ENST00000641643 GFRA2O00451 464 aa23.21■■□□□ 1.31
SYT6-210ENST00000641643 DAB1O75553 588 aa23.21■■□□□ 1.31
SYT6-210ENST00000641643 CAVIN2O95810 425 aa23.21■■□□□ 1.31
SYT6-210ENST00000641643 IGLV3-25P01717 112 aa23.21■■□□□ 1.31
SYT6-210ENST00000641643 ABCB4P21439 1286 aa23.21■■□□□ 1.31
SYT6-210ENST00000641643 SLC6A4P31645 630 aa23.21■■□□□ 1.31
SYT6-210ENST00000641643 CCR1P32246 355 aa23.21■■□□□ 1.31
SYT6-210ENST00000641643 NOS2P35228 1153 aa23.21■■□□□ 1.31
SYT6-210ENST00000641643 GABRB2P47870 512 aa23.21■■□□□ 1.31
SYT6-210ENST00000641643 EIF4HQ15056 248 aaKnown RBP23.21■■□□□ 1.31
SYT6-210ENST00000641643 FAM102AQ5T9C2 384 aaPredicted RBP23.21■■□□□ 1.31
SYT6-210ENST00000641643 NAA35Q5VZE5 725 aa23.21■■□□□ 1.31
SYT6-210ENST00000641643 HJURPQ8NCD3 748 aaPredicted RBP23.21■■□□□ 1.31
SYT6-210ENST00000641643 MDGA1Q8NFP4 955 aa23.21■■□□□ 1.31
SYT6-210ENST00000641643 SLC20A1Q8WUM9 679 aa23.21■■□□□ 1.31
SYT6-210ENST00000641643 HMGB4Q8WW32 186 aa23.21■■□□□ 1.31
SYT6-210ENST00000641643 BTN2A3PQ96KV6 586 aa23.21■■□□□ 1.31
SYT6-210ENST00000641643 ACOX2Q99424 681 aa23.21■■□□□ 1.31
SYT6-210ENST00000641643 CIPCQ9C0C6 399 aa23.21■■□□□ 1.31
SYT6-210ENST00000641643 RTN4Q9NQC3 1192 aaKnown RBP23.21■■□□□ 1.31
SYT6-210ENST00000641643 RRN3Q9NYV6 651 aa23.21■■□□□ 1.31
SYT6-210ENST00000641643 NOCTQ9UK39 431 aaKnown RBP23.21■■□□□ 1.31
SYT6-210ENST00000641643 HCN2Q9UL51 889 aa23.21■■□□□ 1.31
SYT6-210ENST00000641643 STAP1Q9ULZ2 295 aa23.21■■□□□ 1.31
SYT6-210ENST00000641643 NPC1O15118 1278 aa23.2■■□□□ 1.3
SYT6-210ENST00000641643 TIMM44O43615 452 aa23.2■■□□□ 1.3
SYT6-210ENST00000641643 CCDC172P0C7W6 258 aa23.2■■□□□ 1.3
SYT6-210ENST00000641643 HNRNPLP14866 589 aaKnown RBP eCLIP23.2■■□□□ 1.3
SYT6-210ENST00000641643 MATKP42679 507 aa23.2■■□□□ 1.3
SYT6-210ENST00000641643 NOMO3P69849 1222 aa23.2■■□□□ 1.3
SYT6-210ENST00000641643 PITX1P78337 314 aaPredicted RBP23.2■■□□□ 1.3
SYT6-210ENST00000641643 NADSYN1Q6IA69 706 aa23.2■■□□□ 1.3
SYT6-210ENST00000641643 NUCKS1Q9H1E3 243 aaKnown RBP23.2■■□□□ 1.3
SYT6-210ENST00000641643 ELOVL2Q9NXB9 296 aa23.2■■□□□ 1.3
SYT6-210ENST00000641643 CACNA2D2Q9NY47 1150 aa23.2■■□□□ 1.3
SYT6-210ENST00000641643 STIM2Q9P246 746 aa23.2■■□□□ 1.3
SYT6-210ENST00000641643 WDR87Q6ZQQ6 2873 aa23.2■■□□□ 1.3
SYT6-210ENST00000641643 TEX33O43247 280 aa23.19■■□□□ 1.3
SYT6-210ENST00000641643 SERPINC1P01008 464 aa23.19■■□□□ 1.3
SYT6-210ENST00000641643 RETP07949 1114 aa23.19■■□□□ 1.3
SYT6-210ENST00000641643 HLA-FP30511 346 aa23.19■■□□□ 1.3
SYT6-210ENST00000641643 SCNN1AP37088 669 aa23.19■■□□□ 1.3
SYT6-210ENST00000641643 SGSHP51688 502 aa23.19■■□□□ 1.3
SYT6-210ENST00000641643 FMO1Q01740 532 aa23.19■■□□□ 1.3
SYT6-210ENST00000641643 NME3Q13232 169 aa23.19■■□□□ 1.3
SYT6-210ENST00000641643 MS4A13Q5J8X5 152 aa23.19■■□□□ 1.3
SYT6-210ENST00000641643 TRIM72Q6ZMU5 477 aa23.19■■□□□ 1.3
SYT6-210ENST00000641643 LUZP1Q86V48 1076 aa23.19■■□□□ 1.3
SYT6-210ENST00000641643 CHSY1Q86X52 802 aa23.19■■□□□ 1.3
SYT6-210ENST00000641643 MFN1Q8IWA4 741 aa23.19■■□□□ 1.3
SYT6-210ENST00000641643 WFIKKN2Q8TEU8 576 aa23.19■■□□□ 1.3
SYT6-210ENST00000641643 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.19■■□□□ 1.3
SYT6-210ENST00000641643 KCNU1A8MYU2 1149 aa23.18■■□□□ 1.3
SYT6-210ENST00000641643 MTA1Q13330 715 aa23.18■■□□□ 1.3
SYT6-210ENST00000641643 C2CD6Q53TS8 623 aa23.18■■□□□ 1.3
SYT6-210ENST00000641643 LRSAM1Q6UWE0 723 aa23.18■■□□□ 1.3
SYT6-210ENST00000641643 C11orf74Q86VG3 221 aa23.18■■□□□ 1.3
SYT6-210ENST00000641643 XYLT1Q86Y38 959 aa23.18■■□□□ 1.3
SYT6-210ENST00000641643 FAM160A2Q8N612 972 aaPredicted RBP23.18■■□□□ 1.3
SYT6-210ENST00000641643 GPR161Q8N6U8 529 aaKnown RBP23.18■■□□□ 1.3
SYT6-210ENST00000641643 GABRG3Q99928 467 aa23.18■■□□□ 1.3
SYT6-210ENST00000641643 ABCB8Q9NUT2 735 aa23.18■■□□□ 1.3
SYT6-210ENST00000641643 GOLGA8SH3BPF8 625 aa23.18■■□□□ 1.3
SYT6-210ENST00000641643 M0QYT0 321 aa23.18■■□□□ 1.3
SYT6-210ENST00000641643 CYP1A1P04798 512 aaPredicted RBP23.18■■□□□ 1.3
SYT6-210ENST00000641643 EIF4EBP2Q13542 120 aaPredicted RBP23.18■■□□□ 1.3
SYT6-210ENST00000641643 STARD3Q14849 445 aa23.18■■□□□ 1.3
SYT6-210ENST00000641643 ELF2Q15723 593 aa23.18■■□□□ 1.3
SYT6-210ENST00000641643 SND1Q7KZF4 910 aaKnown RBP eCLIP23.18■■□□□ 1.3
SYT6-210ENST00000641643 KBTBD6Q86V97 674 aa23.18■■□□□ 1.3
SYT6-210ENST00000641643 AHI1Q8N157 1196 aa23.18■■□□□ 1.3
SYT6-210ENST00000641643 SEPT11Q9NVA2 429 aaKnown RBP23.18■■□□□ 1.3
SYT6-210ENST00000641643 THAP10Q9P2Z0 257 aaPredicted RBP23.18■■□□□ 1.3
SYT6-210ENST00000641643 XPO7Q9UIA9 1087 aaKnown RBP23.18■■□□□ 1.3
SYT6-210ENST00000641643 GGA2Q9UJY4 613 aa23.18■■□□□ 1.3
SYT6-210ENST00000641643 PLA2G4CQ9UP65 541 aa23.18■■□□□ 1.3
SYT6-210ENST00000641643 CFAP54Q96N23 3096 aa23.17■■□□□ 1.3
SYT6-210ENST00000641643 SPAG17Q6Q759 2223 aa23.17■■□□□ 1.3
SYT6-210ENST00000641643 WASH3PC4AMC7 463 aa23.17■■□□□ 1.3
SYT6-210ENST00000641643 F5H5T6 163 aa23.17■■□□□ 1.3
SYT6-210ENST00000641643 GOLGA6L19H0YKK7 550 aa23.17■■□□□ 1.3
SYT6-210ENST00000641643 DCLK1O15075 740 aa23.17■■□□□ 1.3
SYT6-210ENST00000641643 PABPC1P11940 636 aaKnown RBP23.17■■□□□ 1.3
SYT6-210ENST00000641643 CHRNB2P17787 502 aa23.17■■□□□ 1.3
SYT6-210ENST00000641643 TACR2P21452 398 aa23.17■■□□□ 1.3
SYT6-210ENST00000641643 SULT1E1P49888 294 aa23.17■■□□□ 1.3
SYT6-210ENST00000641643 RPS24P62847 133 aaKnown RBP23.17■■□□□ 1.3
SYT6-210ENST00000641643 CDH18Q13634 790 aa23.17■■□□□ 1.3
SYT6-210ENST00000641643 BYSLQ13895 437 aaKnown RBP23.17■■□□□ 1.3
SYT6-210ENST00000641643 RAP1GAP2Q684P5 730 aa23.17■■□□□ 1.3
SYT6-210ENST00000641643 CHST9Q7L1S5 443 aa23.17■■□□□ 1.3
SYT6-210ENST00000641643 KIAA2013Q8IYS2 634 aa23.17■■□□□ 1.3
SYT6-210ENST00000641643 LGI2Q8N0V4 545 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms