RNA–Protein interactions for RNA: ENST00000641549.1

PTPRVP-205, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

BASIC

Gene PTPRVP, Length 5,067 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-205ENST00000641549 RNF208Q9H0X6 261 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 NINJ2Q9NZG7 142 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 DYRK1BQ9Y463 629 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 MLH1P40692 756 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 ZBTB17Q13105 803 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 PRKAA1Q13131 559 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 DYNC1I2Q13409 638 aaKnown RBP13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 WSCD1Q658N2 575 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 MSL3Q8N5Y2 521 aaKnown RBP13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 LPCAT1Q8NF37 534 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 SH3GL1Q99961 368 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 TBL1YQ9BQ87 522 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 NMRAL1Q9HBL8 299 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 TUBGCP4Q9UGJ1 667 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 SF3B1O75533 1304 aaKnown RBP eCLIP13.78□□□□□ -0.23e-7■■■■■ 122.3
PTPRVP-205ENST00000641549 SYNCRIPO60506 623 aaKnown RBP13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 SKAP2O75563 359 aaPredicted RBP13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 USP17L7P0C7H9 530 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 ALOX15P16050 662 aaPredicted RBP13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 POU6F1Q14863 301 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 WLSQ5T9L3 541 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 LBX2Q6XYB7 198 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 LGI2Q8N0V4 545 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 STX19Q8N4C7 294 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 TEX9Q8N6V9 391 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 APOPT1Q96IL0 206 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 DACH2Q96NX9 599 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 MARCH2Q9P0N8 246 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 UBA2Q9UBT2 640 aaPredicted RBP13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 VTI1BQ9UEU0 232 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 PCYOX1Q9UHG3 505 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 SMIM35A0A1B0GVV1 85 aa13.77□□□□□ -0.2
PTPRVP-205ENST00000641549 ALDH1A2O94788 518 aa13.77□□□□□ -0.2
PTPRVP-205ENST00000641549 ARIH2O95376 493 aa13.77□□□□□ -0.2
PTPRVP-205ENST00000641549 SERPINE1P05121 402 aa13.77□□□□□ -0.2
PTPRVP-205ENST00000641549 ATP5C1P36542 298 aaKnown RBP13.77□□□□□ -0.2
PTPRVP-205ENST00000641549 KLC1Q07866 573 aa13.77□□□□□ -0.2
PTPRVP-205ENST00000641549 CSHL1Q14406 222 aa13.77□□□□□ -0.2
PTPRVP-205ENST00000641549 CCDC149Q6ZUS6 474 aa13.77□□□□□ -0.2
PTPRVP-205ENST00000641549 ATXN2LQ8WWM7 1075 aaKnown RBP13.77□□□□□ -0.2
PTPRVP-205ENST00000641549 TGFB1I1O43294 461 aa13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 DDHD2O94830 711 aa13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 TRIM16O95361 564 aa13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 SERPINB10P48595 397 aa13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 CSE1LP55060 971 aaKnown RBP13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 CORO7P57737 925 aa13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 ZC3H12BQ5HYM0 836 aaKnown RBP13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 TFAP2DQ7Z6R9 452 aa13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 HORMAD1Q86X24 394 aa13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 B3GALNT2Q8NCR0 500 aa13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 GLRBP48167 497 aa13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 AQP5P55064 265 aa13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 PTAR1Q7Z6K3 402 aaPredicted RBP13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 REM2Q8IYK8 340 aaPredicted RBP13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 TOP6BLQ8N6T0 577 aa13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 LNX1Q8TBB1 728 aaPredicted RBP13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 DNAJC9Q8WXX5 260 aa13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 PGLYRP2Q96PD5 576 aa13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 POLR1EQ9GZS1 481 aaKnown RBP13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 ATXN3LQ9H3M9 355 aa13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 TAS2R13Q9NYV9 303 aa13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 UBP1Q9NZI7 540 aa13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 PARP4Q9UKK3 1724 aaKnown RBP13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 EFCAB14O75071 495 aa13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 GRK3P35626 688 aa13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 FMO1Q01740 532 aa13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 CNTN1Q12860 1018 aa13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 PPM1LQ5SGD2 360 aa13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 FAM124BQ9H5Z6 455 aaPredicted RBP13.77□□□□□ -0.21
PTPRVP-205ENST00000641549 SYNDIG1LA6NDD5 238 aa13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 DGKIO75912 1065 aa13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 TRUB2O95900 331 aaKnown RBP13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 PSMA4P25789 261 aaKnown RBP13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 MGAT1P26572 445 aa13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 POLR2LP62875 67 aaKnown RBP13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 CYLC2Q14093 348 aaPredicted RBP13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 NOMO2Q5JPE7 1267 aa13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 DSG4Q86SJ6 1040 aa13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 KIF2BQ8N4N8 673 aa13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 ZNF558Q96NG5 402 aa13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 ADNPQ9H2P0 1102 aa13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 ST6GALNAC4Q9H4F1 302 aa13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 TAGLN3Q9UI15 199 aa13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 A0A0A0MRY4 1105 aa13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 WDR27A2RRH5 827 aa13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 MYO1GB0I1T2 1018 aa13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 CYP1A1P04798 512 aaPredicted RBP13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 CYP2A6P11509 494 aaPredicted RBP13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 GRIK3Q13003 919 aa13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 ARSHQ5FYA8 562 aa13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 BBS7Q8IWZ6 715 aa13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 CEP70Q8NHQ1 597 aa13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 SPATA13Q96N96 652 aa13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 ASB2Q96Q27 587 aa13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 SLC40A1Q9NP59 571 aa13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 TRIM13O60858 407 aa13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 SOAT1P35610 550 aa13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 MMP13P45452 471 aa13.76□□□□□ -0.21
PTPRVP-205ENST00000641549 DRG2P55039 364 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms