RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 IGLV3-25P01717 112 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 TFE3P19532 575 aaPredicted RBP13.41□□□□□ -0.26
PHGDH-218ENST00000641491 HTR7P34969 479 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 ADRA1BP35368 520 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 ATXN1P54253 815 aaKnown RBP13.41□□□□□ -0.26
PHGDH-218ENST00000641491 PITX1P78337 314 aaPredicted RBP13.41□□□□□ -0.26
PHGDH-218ENST00000641491 ZNF252P-AS1Q0IIN9 211 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 USP4Q13107 963 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 PDK2Q15119 407 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 PDGFRLQ15198 375 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 KCNT1Q5JUK3 1230 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 SH3PXD2AQ5TCZ1 1133 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 TTC39BQ5VTQ0 682 aaPredicted RBP13.41□□□□□ -0.26
PHGDH-218ENST00000641491 RAP1GAP2Q684P5 730 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 TRNP1Q6NT89 227 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 ZNF557Q8N988 423 aaPredicted RBP13.41□□□□□ -0.26
PHGDH-218ENST00000641491 CSGALNACT1Q8TDX6 532 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 ATRIPQ8WXE1 791 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 ATP2A3Q93084 1043 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 NXPE3Q969Y0 559 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 ELSPBP1Q96BH3 223 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 OTUB2Q96DC9 234 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 TBC1D31Q96DN5 1066 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 FCRL2Q96LA5 508 aaPredicted RBP13.41□□□□□ -0.26
PHGDH-218ENST00000641491 SLC22A12Q96S37 553 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 MYADMQ96S97 322 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 SNRNP25Q9BV90 132 aaKnown RBP13.41□□□□□ -0.26
PHGDH-218ENST00000641491 GOLPH3Q9H4A6 298 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 CATSPERBQ9H7T0 1116 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 CD320Q9NPF0 282 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 ARHGEF38Q9NXL2 777 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 EPS15L1Q9UBC2 864 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 SALL4Q9UJQ4 1053 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 FZD10Q9ULW2 581 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 MYO7AQ13402 2215 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 KCNK3O14649 394 aa13.4□□□□□ -0.26
PHGDH-218ENST00000641491 ECI2O75521 394 aa13.4□□□□□ -0.26
PHGDH-218ENST00000641491 ZRANB2O95218 330 aaKnown RBP eCLIP13.4□□□□□ -0.26
PHGDH-218ENST00000641491 PRAMEF12O95522 483 aa13.4□□□□□ -0.26
PHGDH-218ENST00000641491 PSMC3P17980 439 aa13.4□□□□□ -0.26
PHGDH-218ENST00000641491 CTNNA2P26232 953 aa13.4□□□□□ -0.26
PHGDH-218ENST00000641491 CTNNA1P35221 906 aaKnown RBP13.4□□□□□ -0.26
PHGDH-218ENST00000641491 AMPD2Q01433 879 aa13.4□□□□□ -0.26
PHGDH-218ENST00000641491 SCAPQ12770 1279 aa13.4□□□□□ -0.26
PHGDH-218ENST00000641491 SMAD2Q15796 467 aaKnown RBP13.4□□□□□ -0.26
PHGDH-218ENST00000641491 ZNF77Q15935 545 aa13.4□□□□□ -0.26
PHGDH-218ENST00000641491 ADGRF1Q5T601 910 aa13.4□□□□□ -0.26
PHGDH-218ENST00000641491 DAB2IPQ5VWQ8 1189 aa13.4□□□□□ -0.26
PHGDH-218ENST00000641491 ZNF354CQ86Y25 554 aa13.4□□□□□ -0.26
PHGDH-218ENST00000641491 LGI2Q8N0V4 545 aa13.4□□□□□ -0.26
PHGDH-218ENST00000641491 CPA6Q8N4T0 437 aa13.4□□□□□ -0.26
PHGDH-218ENST00000641491 CCDC185Q8N715 623 aa13.4□□□□□ -0.26
PHGDH-218ENST00000641491 KIAA1958Q8N8K9 716 aa13.4□□□□□ -0.26
PHGDH-218ENST00000641491 LRRC57Q8N9N7 239 aa13.4□□□□□ -0.26
PHGDH-218ENST00000641491 HJURPQ8NCD3 748 aaPredicted RBP13.4□□□□□ -0.26
PHGDH-218ENST00000641491 DDI1Q8WTU0 396 aa13.4□□□□□ -0.26
PHGDH-218ENST00000641491 AZIN2Q96A70 460 aa13.4□□□□□ -0.26
PHGDH-218ENST00000641491 ZSWIM3Q96MP5 696 aa13.4□□□□□ -0.26
PHGDH-218ENST00000641491 NAP1L3Q99457 506 aaPredicted RBP13.4□□□□□ -0.26
PHGDH-218ENST00000641491 KXD1Q9BQD3 176 aa13.4□□□□□ -0.26
PHGDH-218ENST00000641491 TRMT61BQ9BVS5 477 aaKnown RBP13.4□□□□□ -0.26
PHGDH-218ENST00000641491 KLHL11Q9NVR0 708 aa13.4□□□□□ -0.26
PHGDH-218ENST00000641491 OR12D3Q9UGF7 316 aa13.4□□□□□ -0.26
PHGDH-218ENST00000641491 DNAI1Q9UI46 699 aa13.4□□□□□ -0.26
PHGDH-218ENST00000641491 AGO1Q9UL18 857 aaKnown RBP13.4□□□□□ -0.26
PHGDH-218ENST00000641491 TRANK1O15050 2925 aa13.4□□□□□ -0.27
PHGDH-218ENST00000641491 ATG2AQ2TAZ0 1938 aa13.39□□□□□ -0.27
PHGDH-218ENST00000641491 FGF10O15520 208 aaPredicted RBP13.39□□□□□ -0.27
PHGDH-218ENST00000641491 IGLV3-27P01718 113 aa13.39□□□□□ -0.27
PHGDH-218ENST00000641491 RARAP10276 462 aa13.39□□□□□ -0.27
PHGDH-218ENST00000641491 TCF3P15923 654 aa13.39□□□□□ -0.27
PHGDH-218ENST00000641491 ZFXP17010 805 aaPredicted RBP13.39□□□□□ -0.27
PHGDH-218ENST00000641491 TACR2P21452 398 aa13.39□□□□□ -0.27
PHGDH-218ENST00000641491 EPHB2P29323 1055 aa13.39□□□□□ -0.27
PHGDH-218ENST00000641491 SERPINB6P35237 376 aa13.39□□□□□ -0.27
PHGDH-218ENST00000641491 VIPR2P41587 438 aa13.39□□□□□ -0.27
PHGDH-218ENST00000641491 SLC25A11Q02978 314 aaKnown RBP13.39□□□□□ -0.27
PHGDH-218ENST00000641491 CDH18Q13634 790 aa13.39□□□□□ -0.27
PHGDH-218ENST00000641491 ANO4Q32M45 955 aa13.39□□□□□ -0.27
PHGDH-218ENST00000641491 PREPLQ4J6C6 727 aaPredicted RBP13.39□□□□□ -0.27
PHGDH-218ENST00000641491 MPPE1Q53F39 396 aa13.39□□□□□ -0.27
PHGDH-218ENST00000641491 HTR3DQ70Z44 454 aa13.39□□□□□ -0.27
PHGDH-218ENST00000641491 NT5DC3Q86UY8 548 aa13.39□□□□□ -0.27
PHGDH-218ENST00000641491 RFX6Q8HWS3 928 aa13.39□□□□□ -0.27
PHGDH-218ENST00000641491 KATNAL2Q8IYT4 538 aa13.39□□□□□ -0.27
PHGDH-218ENST00000641491 RCOR2Q8IZ40 523 aa13.39□□□□□ -0.27
PHGDH-218ENST00000641491 OSCP1Q8WVF1 389 aa13.39□□□□□ -0.27
PHGDH-218ENST00000641491 SLC39A13Q96H72 371 aa13.39□□□□□ -0.27
PHGDH-218ENST00000641491 FERMT1Q9BQL6 677 aa13.39□□□□□ -0.27
PHGDH-218ENST00000641491 OSBPL2Q9H1P3 480 aa13.39□□□□□ -0.27
PHGDH-218ENST00000641491 KCNH6Q9H252 994 aa13.39□□□□□ -0.27
PHGDH-218ENST00000641491 BRD9Q9H8M2 597 aa13.39□□□□□ -0.27
PHGDH-218ENST00000641491 TRPV4Q9HBA0 871 aa13.39□□□□□ -0.27
PHGDH-218ENST00000641491 GPATCH2LQ9NWQ4 482 aa13.39□□□□□ -0.27
PHGDH-218ENST00000641491 IGSF9Q9P2J2 1179 aa13.39□□□□□ -0.27
PHGDH-218ENST00000641491 VANGL2Q9ULK5 521 aa13.39□□□□□ -0.27
PHGDH-218ENST00000641491 PACSIN2Q9UNF0 486 aaPredicted RBP13.39□□□□□ -0.27
PHGDH-218ENST00000641491 CCL26Q9Y258 94 aa13.39□□□□□ -0.27
PHGDH-218ENST00000641491 PCDHA3Q9Y5H8 950 aa13.39□□□□□ -0.27
PHGDH-218ENST00000641491 ESPNB1AK53 854 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms