RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 LLPHQ9BRT6 129 aaKnown RBP8.22□□□□□ -1.09
PHGDH-217ENST00000641455 DCLK3Q9C098 648 aa8.22□□□□□ -1.09
PHGDH-217ENST00000641455 ABCG4Q9H172 646 aa8.22□□□□□ -1.09
PHGDH-217ENST00000641455 OSBPL2Q9H1P3 480 aa8.22□□□□□ -1.09
PHGDH-217ENST00000641455 PABPC3Q9H361 631 aaKnown RBP8.22□□□□□ -1.09
PHGDH-217ENST00000641455 SMYD3Q9H7B4 428 aa8.22□□□□□ -1.09
PHGDH-217ENST00000641455 EBF2Q9HAK2 575 aa8.22□□□□□ -1.09
PHGDH-217ENST00000641455 NMUR1Q9HB89 426 aa8.22□□□□□ -1.09
PHGDH-217ENST00000641455 ASCL3Q9NQ33 180 aa8.22□□□□□ -1.09
PHGDH-217ENST00000641455 SEL1LQ9UBV2 794 aa8.22□□□□□ -1.09
PHGDH-217ENST00000641455 NAGPAQ9UK23 515 aa8.22□□□□□ -1.09
PHGDH-217ENST00000641455 PCDHB13Q9Y5F0 798 aa8.22□□□□□ -1.09
PHGDH-217ENST00000641455 SPTAN1Q13813 2472 aaKnown RBP8.22□□□□□ -1.09
PHGDH-217ENST00000641455 A0A1W2PP55 124 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 TRIM38O00635 465 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 OPA1O60313 960 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 RNASEH1O60930 286 aaKnown RBP8.21□□□□□ -1.1
PHGDH-217ENST00000641455 PHACTR2O75167 634 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 BEST1O76090 585 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 CST3P01034 146 aaPredicted RBP8.21□□□□□ -1.1
PHGDH-217ENST00000641455 AFPP02771 609 aaKnown RBP8.21□□□□□ -1.1
PHGDH-217ENST00000641455 KLKB1P03952 638 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 FAM163BP0C2L3 166 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 IDEP14735 1019 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 ADORA2BP29275 332 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 RXRGP48443 463 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 CASP5P51878 434 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 MYL6P60660 151 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 COG7P83436 770 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 EFEMP1Q12805 493 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 KLHDC10Q6PID8 442 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 PAQR9Q6ZVX9 377 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 USP30Q70CQ3 517 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 GPRIN1Q7Z2K8 1008 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 ACOT1Q86TX2 421 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 FUKQ8N0W3 1084 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 RDH13Q8NBN7 331 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 RBBP8NLQ8NC74 664 aaPredicted RBP8.21□□□□□ -1.1
PHGDH-217ENST00000641455 OR2T34Q8NGX1 318 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 SLC2A14Q8TDB8 520 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 CCDC127Q96BQ5 260 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 SLC2A11Q9BYW1 496 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 TMEM245Q9H330 911 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 MTG2Q9H4K7 406 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 FAM49BQ9NUQ9 324 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.21□□□□□ -1.1
PHGDH-217ENST00000641455 SERGEFQ9UGK8 458 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 SUN2Q9UH99 717 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 AGO1Q9UL18 857 aaKnown RBP8.21□□□□□ -1.1
PHGDH-217ENST00000641455 SATB2Q9UPW6 733 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 SCML2Q9UQR0 700 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 MYO9AB2RTY4 2548 aa8.21□□□□□ -1.1
PHGDH-217ENST00000641455 COL12A1Q99715 3063 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 A0A1B0GVM2 712 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 KIAA0391O15091 583 aaKnown RBP8.2□□□□□ -1.1
PHGDH-217ENST00000641455 MID1O15344 667 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 SUV39H1O43463 412 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 KIF20AO95235 890 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 ATP5BP06576 529 aaKnown RBP8.2□□□□□ -1.1
PHGDH-217ENST00000641455 FAM200BP0CF97 657 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 ST8SIA6P61647 398 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 TLE1Q04724 770 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 ZNF211Q13398 564 aaPredicted RBP8.2□□□□□ -1.1
PHGDH-217ENST00000641455 ALCAMQ13740 583 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 KCNJ12Q14500 433 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 ZNF699Q32M78 642 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 CDCP2Q5VXM1 449 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 MBLAC2Q68D91 279 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 NAPEPLDQ6IQ20 393 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 USP53Q70EK8 1073 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 RSRC2Q7L4I2 434 aaKnown RBP8.2□□□□□ -1.1
PHGDH-217ENST00000641455 KANSL1Q7Z3B3 1105 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 SPATS2Q86XZ4 545 aaKnown RBP8.2□□□□□ -1.1
PHGDH-217ENST00000641455 OR14C36Q8NHC7 312 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 MAPK15Q8TD08 544 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 EXTL1Q92935 676 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 HPS3Q969F9 1004 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 SYAP1Q96A49 352 aaPredicted RBP8.2□□□□□ -1.1
PHGDH-217ENST00000641455 CCNL2Q96S94 520 aaPredicted RBP8.2□□□□□ -1.1
PHGDH-217ENST00000641455 CGRRF1Q99675 332 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 STRA6Q9BX79 667 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 NEUROG2Q9H2A3 272 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 ERVMER34-1Q9H9K5 563 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 STARD5Q9NSY2 213 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 ABCB8Q9NUT2 735 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 GGA2Q9UJY4 613 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 STRIP2Q9ULQ0 834 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 SCML1Q9UN30 329 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 LIMCH1Q9UPQ0 1083 aa8.2□□□□□ -1.1
PHGDH-217ENST00000641455 TEX15Q9BXT5 2789 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 NOTCH2Q04721 2471 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 TDRD6O60522 2096 aaKnown RBP8.19□□□□□ -1.1
PHGDH-217ENST00000641455 SLC12A8A0AV02 714 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 ENO4A6NNW6 628 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 MAGEC1O60732 1142 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 SIN3BO75182 1162 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 CENPBP07199 599 aaPredicted RBP8.19□□□□□ -1.1
PHGDH-217ENST00000641455 DLDP09622 509 aaKnown RBP8.19□□□□□ -1.1
PHGDH-217ENST00000641455 FAM87AP0C7U9 286 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 ALPPL2P10696 532 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms